RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 POM121L12Q8N7R1 296 aa6.2□□□□□ -1.42
SNRPA1-206ENST00000558059 RNASE8Q8TDE3 154 aaKnown RBP6.2□□□□□ -1.42
SNRPA1-206ENST00000558059 FXYD5Q96DB9 178 aa6.2□□□□□ -1.42
SNRPA1-206ENST00000558059 MRPL32Q9BYC8 188 aaKnown RBP6.2□□□□□ -1.42
SNRPA1-206ENST00000558059 SMIM3Q9BZL3 60 aa6.2□□□□□ -1.42
SNRPA1-206ENST00000558059 AGPAT4-IT1Q9H0P7 198 aa6.2□□□□□ -1.42
SNRPA1-206ENST00000558059 MRPL18Q9H0U6 180 aaKnown RBP6.2□□□□□ -1.42
SNRPA1-206ENST00000558059 OR51M1Q9H341 326 aa6.2□□□□□ -1.42
SNRPA1-206ENST00000558059 KCNIP2Q9NS61 270 aa6.2□□□□□ -1.42
SNRPA1-206ENST00000558059 FUT9Q9Y231 359 aa6.2□□□□□ -1.42
SNRPA1-206ENST00000558059 TIMM9Q9Y5J7 89 aa6.2□□□□□ -1.42
SNRPA1-206ENST00000558059 MUC4Q99102 2169 aa6.2□□□□□ -1.42
SNRPA1-206ENST00000558059 C17orf112F2Z3M2 114 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 PTTG1O95997 202 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 NBEAP1P0C6P0 100 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 P0DMU3 169 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 FAM231AP0DMU4 169 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 FAM231CP0DMU5 169 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 DEFB130BP0DP73 79 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 DEFB130AP0DP74 79 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 LEPP41159 167 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 ICAM4Q14773 271 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 FFAR4Q5NUL3 377 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 TMEM88Q6PEY1 159 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 TMEM263Q8WUH6 116 aaKnown RBP6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 RNF141Q8WVD5 230 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 ZNF503Q96F45 646 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 C16orf74Q96GX8 76 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 FAM19A4Q96LR4 140 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 LINC00477Q96M19 166 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 PAXXQ9BUH6 204 aa6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 TIMM8BQ9Y5J9 83 aaPredicted RBP6.19□□□□□ -1.42
SNRPA1-206ENST00000558059 IGKV2-40A0A087WW87 121 aaPredicted RBP6.18□□□□□ -1.42
SNRPA1-206ENST00000558059 TRAV12-3A0A0B4J271 114 aa6.18□□□□□ -1.42
SNRPA1-206ENST00000558059 KLLNB2CW77 178 aa6.18□□□□□ -1.42
SNRPA1-206ENST00000558059 J3KRW8 73 aa6.18□□□□□ -1.42
SNRPA1-206ENST00000558059 IFNA5P01569 189 aa6.18□□□□□ -1.42
SNRPA1-206ENST00000558059 IGKV2D-40P01614 121 aaPredicted RBP6.18□□□□□ -1.42
SNRPA1-206ENST00000558059 OR10J4P0C629 311 aa6.18□□□□□ -1.42
SNRPA1-206ENST00000558059 C9orf47Q6ZRZ4 202 aa6.18□□□□□ -1.42
SNRPA1-206ENST00000558059 SCGB1C1Q8TD33 95 aa6.18□□□□□ -1.42
SNRPA1-206ENST00000558059 PHYHIPLQ96FC7 376 aa6.18□□□□□ -1.42
SNRPA1-206ENST00000558059 VGLL1Q99990 258 aa6.18□□□□□ -1.42
SNRPA1-206ENST00000558059 KRTAP4-9Q9BYQ8 210 aa6.18□□□□□ -1.42
SNRPA1-206ENST00000558059 AAMDCQ9H7C9 122 aa6.18□□□□□ -1.42
SNRPA1-206ENST00000558059 NOP10Q9NPE3 64 aaKnown RBP6.18□□□□□ -1.42
SNRPA1-206ENST00000558059 PKHD1P08F94 4074 aa6.17□□□□□ -1.42
SNRPA1-206ENST00000558059 C7orf71A4D174 169 aa6.17□□□□□ -1.42
SNRPA1-206ENST00000558059 CBY3A6NI87 242 aa6.17□□□□□ -1.42
SNRPA1-206ENST00000558059 ZNF324O75467 553 aaPredicted RBP6.17□□□□□ -1.42
SNRPA1-206ENST00000558059 EIF3GO75821 320 aaKnown RBP eCLIP6.17□□□□□ -1.42
SNRPA1-206ENST00000558059 SLC25A5P05141 298 aaKnown RBP6.17□□□□□ -1.42
SNRPA1-206ENST00000558059 CRISP2P16562 243 aa6.17□□□□□ -1.42
SNRPA1-206ENST00000558059 CD300CQ08708 224 aa6.17□□□□□ -1.42
SNRPA1-206ENST00000558059 FAM122CQ6P4D5 195 aa6.17□□□□□ -1.42
SNRPA1-206ENST00000558059 LINC00612Q8N6U2 182 aa6.17□□□□□ -1.42
SNRPA1-206ENST00000558059 PYGO2Q9BRQ0 406 aa6.17□□□□□ -1.42
SNRPA1-206ENST00000558059 MED28Q9H204 178 aa6.17□□□□□ -1.42
SNRPA1-206ENST00000558059 PKD1P98161 4303 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 F5H768 121 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 OR7C2O60412 319 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 ATP5G1P05496 136 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 NMBP08949 121 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 ATP5G3P48201 142 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 RANP62826 216 aaKnown RBP6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 BTN1A1Q13410 526 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 RNF212Q495C1 297 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 Q5BKY6 102 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 PRR9Q5T870 116 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 CCDC28AQ8IWP9 274 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 LYPD1Q8N2G4 141 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 ZFAND2AQ8N6M9 145 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 C15orf53Q8NAA6 179 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 Q9H3A6 140 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 ZNF492Q9P255 531 aa6.16□□□□□ -1.42
SNRPA1-206ENST00000558059 M6PRP20645 277 aa6.15□□□□□ -1.42
SNRPA1-206ENST00000558059 RNASE4P34096 147 aaKnown RBP6.15□□□□□ -1.42
SNRPA1-206ENST00000558059 TAS2R45P59539 299 aa6.15□□□□□ -1.42
SNRPA1-206ENST00000558059 UBE2L3P68036 154 aaKnown RBP6.15□□□□□ -1.42
SNRPA1-206ENST00000558059 DAZ2Q13117 558 aaKnown RBP6.15□□□□□ -1.42
SNRPA1-206ENST00000558059 ACOT6Q3I5F7 207 aaPredicted RBP6.15□□□□□ -1.42
SNRPA1-206ENST00000558059 KHDC3LQ587J8 217 aa6.15□□□□□ -1.42
SNRPA1-206ENST00000558059 TMEM78Q5T7P6 136 aa6.15□□□□□ -1.42
SNRPA1-206ENST00000558059 Q6ZQT7 251 aa6.15□□□□□ -1.42
SNRPA1-206ENST00000558059 C11orf72Q8NBR9 251 aa6.15□□□□□ -1.42
SNRPA1-206ENST00000558059 AQP10Q96PS8 301 aa6.15□□□□□ -1.42
SNRPA1-206ENST00000558059 LINC00467Q9BRT7 94 aa6.15□□□□□ -1.42
SNRPA1-206ENST00000558059 TRBV7-9A0A0J9YWB2 115 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 GAGE12BA1L429 117 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 RBAKDNA6NC62 111 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 SNURFLB1AK76 121 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 M0R2N4 97 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 GAGE7O76087 117 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 GPX1P07203 203 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 GIPP09681 153 aaPredicted RBP6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 GAGE12FP0CL80 117 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 GAGE12GP0CL81 117 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 GAGE12IP0CL82 117 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 CSN1S1P47710 185 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 ZNF138P52744 262 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms