RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 TEX48A0A1B0GUV7 120 aa9.17□□□□□ -0.94
TMEM260-215ENST00000557626 H3BQ15 152 aa9.17□□□□□ -0.94
TMEM260-215ENST00000557626 LCE2BO14633 110 aa9.17□□□□□ -0.94
TMEM260-215ENST00000557626 EIF5AP63241 154 aaKnown RBP9.17□□□□□ -0.94
TMEM260-215ENST00000557626 ALKAL2Q6UX46 152 aa9.17□□□□□ -0.94
TMEM260-215ENST00000557626 TCF24Q7RTU0 167 aa9.17□□□□□ -0.94
TMEM260-215ENST00000557626 TRPT1Q86TN4 253 aaKnown RBP9.17□□□□□ -0.94
TMEM260-215ENST00000557626 RAB24Q969Q5 203 aa9.17□□□□□ -0.94
TMEM260-215ENST00000557626 PFDN5Q99471 154 aa9.17□□□□□ -0.94
TMEM260-215ENST00000557626 TMEM70Q9BUB7 260 aa9.17□□□□□ -0.94
TMEM260-215ENST00000557626 SLC25A22Q9H936 323 aa9.17□□□□□ -0.94
TMEM260-215ENST00000557626 TMEM189A5PLL7 270 aa9.16□□□□□ -0.94
TMEM260-215ENST00000557626 HMGB3O15347 200 aaKnown RBP9.16□□□□□ -0.94
TMEM260-215ENST00000557626 SNRPCP09234 159 aaKnown RBP9.16□□□□□ -0.94
TMEM260-215ENST00000557626 IGLC2P0DOY2 106 aa9.16□□□□□ -0.94
TMEM260-215ENST00000557626 PYYP10082 97 aa9.16□□□□□ -0.94
TMEM260-215ENST00000557626 SULT1A2P50226 295 aa9.16□□□□□ -0.94
TMEM260-215ENST00000557626 LINC00528Q8N1L1 170 aa9.16□□□□□ -0.94
TMEM260-215ENST00000557626 MRPL32Q9BYC8 188 aaKnown RBP9.16□□□□□ -0.94
TMEM260-215ENST00000557626 A0A1W2PS18 150 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 SOCS3O14543 225 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 GAS8-AS1O95177 125 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 NUDT3O95989 172 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 RHOBP62745 196 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 KIR3DS1Q14943 382 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 AKR1C8PQ5T2L2 129 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 TEX261Q6UWH6 196 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 OR8I2Q8N0Y5 310 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 FAM24BQ8N5W8 94 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 FXYD5Q96DB9 178 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 PHYHIPLQ96FC7 376 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 ZNF586Q9NXT0 402 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 TMEM14CQ9P0S9 112 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 DKK2Q9UBU2 259 aa9.15□□□□□ -0.94
TMEM260-215ENST00000557626 UMAD1C9J7I0 102 aa9.14□□□□□ -0.95
TMEM260-215ENST00000557626 H3BTX0 84 aa9.14□□□□□ -0.95
TMEM260-215ENST00000557626 NDUFB4O95168 129 aa9.14□□□□□ -0.95
TMEM260-215ENST00000557626 MBP02144 154 aa9.14□□□□□ -0.95
TMEM260-215ENST00000557626 STAG3L2P0CL84 134 aa9.14□□□□□ -0.95
TMEM260-215ENST00000557626 STAG3L3P0CL85 134 aa9.14□□□□□ -0.95
TMEM260-215ENST00000557626 CDC34P49427 236 aaPredicted RBP9.14□□□□□ -0.95
TMEM260-215ENST00000557626 LINC00315P59091 139 aa9.14□□□□□ -0.95
TMEM260-215ENST00000557626 PAFAH1B2P68402 229 aa9.14□□□□□ -0.95
TMEM260-215ENST00000557626 FAM222AQ5U5X8 452 aa9.14□□□□□ -0.95
TMEM260-215ENST00000557626 SIGLEC15Q6ZMC9 328 aa9.14□□□□□ -0.95
TMEM260-215ENST00000557626 Q6ZRN7 208 aaPredicted RBP9.14□□□□□ -0.95
TMEM260-215ENST00000557626 ZNF680Q8NEM1 530 aa9.14□□□□□ -0.95
TMEM260-215ENST00000557626 DCANP1Q8TF63 244 aa9.14□□□□□ -0.95
TMEM260-215ENST00000557626 MBD3L1Q8WWY6 194 aa9.14□□□□□ -0.95
TMEM260-215ENST00000557626 A0A087X0K7 114 aa9.13□□□□□ -0.95
TMEM260-215ENST00000557626 TRAV8-2A0A0B4J237 113 aa9.13□□□□□ -0.95
TMEM260-215ENST00000557626 CTXND1A0A1B0GTU2 59 aa9.13□□□□□ -0.95
TMEM260-215ENST00000557626 K7EQG2 157 aa9.13□□□□□ -0.95
TMEM260-215ENST00000557626 SLC17A3O00476 420 aa9.13□□□□□ -0.95
TMEM260-215ENST00000557626 OR10J4P0C629 311 aa9.13□□□□□ -0.95
TMEM260-215ENST00000557626 CCL20P78556 96 aa9.13□□□□□ -0.95
TMEM260-215ENST00000557626 LCN15Q6UWW0 184 aa9.13□□□□□ -0.95
TMEM260-215ENST00000557626 FAM213BQ8TBF2 198 aa9.13□□□□□ -0.95
TMEM260-215ENST00000557626 SUN5Q8TC36 379 aa9.13□□□□□ -0.95
TMEM260-215ENST00000557626 SAT2Q96F10 170 aaPredicted RBP9.13□□□□□ -0.95
TMEM260-215ENST00000557626 GRAMD2BQ96HH9 432 aa9.13□□□□□ -0.95
TMEM260-215ENST00000557626 ACTR3CQ9C0K3 210 aaPredicted RBP9.13□□□□□ -0.95
TMEM260-215ENST00000557626 MS4A6AQ9H2W1 248 aa9.13□□□□□ -0.95
TMEM260-215ENST00000557626 TMPRSS5Q9H3S3 457 aa9.13□□□□□ -0.95
TMEM260-215ENST00000557626 DNAH8Q96JB1 4490 aa9.13□□□□□ -0.95
TMEM260-215ENST00000557626 A0A1W2PPV4 95 aa9.12□□□□□ -0.95
TMEM260-215ENST00000557626 ARL14EPLP0DKL9 152 aa9.12□□□□□ -0.95
TMEM260-215ENST00000557626 RPL7P18124 248 aaKnown RBP9.12□□□□□ -0.95
TMEM260-215ENST00000557626 FGF8P55075 233 aaPredicted RBP9.12□□□□□ -0.95
TMEM260-215ENST00000557626 IGFL4Q6B9Z1 124 aa9.12□□□□□ -0.95
TMEM260-215ENST00000557626 EIF5AL1Q6IS14 154 aaKnown RBP9.12□□□□□ -0.95
TMEM260-215ENST00000557626 DPPA3Q6W0C5 159 aa9.12□□□□□ -0.95
TMEM260-215ENST00000557626 BPIFA4PQ86YQ2 179 aa9.12□□□□□ -0.95
TMEM260-215ENST00000557626 RNF141Q8WVD5 230 aa9.12□□□□□ -0.95
TMEM260-215ENST00000557626 PCNPQ8WW12 178 aaKnown RBP9.12□□□□□ -0.95
TMEM260-215ENST00000557626 NARS2Q96I59 477 aaKnown RBP9.12□□□□□ -0.95
TMEM260-215ENST00000557626 OR51M1Q9H341 326 aa9.12□□□□□ -0.95
TMEM260-215ENST00000557626 TMEM231Q9H6L2 316 aa9.12□□□□□ -0.95
TMEM260-215ENST00000557626 TRBV19A0A075B6N1 114 aa9.11□□□□□ -0.95
TMEM260-215ENST00000557626 TRAV1-1A0A0B4J248 108 aa9.11□□□□□ -0.95
TMEM260-215ENST00000557626 MAP1LC3B2A6NCE7 125 aa9.11□□□□□ -0.95
TMEM260-215ENST00000557626 HELTA6NFD8 242 aa9.11□□□□□ -0.95
TMEM260-215ENST00000557626 DNASE2O00115 360 aaPredicted RBP9.11□□□□□ -0.95
TMEM260-215ENST00000557626 DNAH10OSP0CZ25 163 aa9.11□□□□□ -0.95
TMEM260-215ENST00000557626 HIST1H1EP10412 219 aaKnown RBP9.11□□□□□ -0.95
TMEM260-215ENST00000557626 GCHFRP30047 84 aa9.11□□□□□ -0.95
TMEM260-215ENST00000557626 C20orf173Q96LM9 149 aa9.11□□□□□ -0.95
TMEM260-215ENST00000557626 GPR82Q96P67 336 aa9.11□□□□□ -0.95
TMEM260-215ENST00000557626 PAXXQ9BUH6 204 aa9.11□□□□□ -0.95
TMEM260-215ENST00000557626 MAP1LC3BQ9GZQ8 125 aa9.11□□□□□ -0.95
TMEM260-215ENST00000557626 NRN1Q9NPD7 142 aa9.11□□□□□ -0.95
TMEM260-215ENST00000557626 PFDN2Q9UHV9 154 aa9.11□□□□□ -0.95
TMEM260-215ENST00000557626 OR7C2O60412 319 aa9.1□□□□□ -0.95
TMEM260-215ENST00000557626 NBEAP1P0C6P0 100 aa9.1□□□□□ -0.95
TMEM260-215ENST00000557626 GALR1P47211 349 aa9.1□□□□□ -0.95
TMEM260-215ENST00000557626 RAB5CP51148 216 aa9.1□□□□□ -0.95
TMEM260-215ENST00000557626 DEFB1P60022 68 aa9.1□□□□□ -0.95
TMEM260-215ENST00000557626 RPL11P62913 178 aaKnown RBP9.1□□□□□ -0.95
TMEM260-215ENST00000557626 KHDC3LQ587J8 217 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms