RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 TAS2R60P59551 318 aa8.97□□□□□ -0.97
SLIRP-211ENST00000557623 ZNF345Q14585 488 aa8.97□□□□□ -0.97
SLIRP-211ENST00000557623 C9orf47Q6ZRZ4 202 aa8.97□□□□□ -0.97
SLIRP-211ENST00000557623 RXFP4Q8TDU9 374 aa8.97□□□□□ -0.97
SLIRP-211ENST00000557623 ACTR3CQ9C0K3 210 aaPredicted RBP8.97□□□□□ -0.97
SLIRP-211ENST00000557623 SH3BGRL3Q9H299 93 aa8.97□□□□□ -0.97
SLIRP-211ENST00000557623 CSMD3Q7Z407 3707 aa8.96□□□□□ -0.97
SLIRP-211ENST00000557623 TRAV10A0A0B4J240 114 aa8.96□□□□□ -0.98
SLIRP-211ENST00000557623 H7BYZ3 331 aa8.96□□□□□ -0.98
SLIRP-211ENST00000557623 SLC25A5P05141 298 aaKnown RBP8.96□□□□□ -0.98
SLIRP-211ENST00000557623 STAG3L2P0CL84 134 aa8.96□□□□□ -0.98
SLIRP-211ENST00000557623 STAG3L3P0CL85 134 aa8.96□□□□□ -0.98
SLIRP-211ENST00000557623 TMEM78Q5T7P6 136 aa8.96□□□□□ -0.98
SLIRP-211ENST00000557623 KCNRGQ8N5I3 272 aa8.96□□□□□ -0.98
SLIRP-211ENST00000557623 C2CD4CQ8TF44 421 aa8.96□□□□□ -0.98
SLIRP-211ENST00000557623 RAB24Q969Q5 203 aa8.96□□□□□ -0.98
SLIRP-211ENST00000557623 ARPC5LQ9BPX5 153 aa8.96□□□□□ -0.98
SLIRP-211ENST00000557623 OTORQ9NRC9 128 aa8.96□□□□□ -0.98
SLIRP-211ENST00000557623 CELA1Q9UNI1 258 aa8.96□□□□□ -0.98
SLIRP-211ENST00000557623 A0A0D9SG52 128 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 RBAKDNA6NC62 111 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 ZNF705GA8MUZ8 300 aaPredicted RBP8.95□□□□□ -0.98
SLIRP-211ENST00000557623 HMGB3O15347 200 aaKnown RBP8.95□□□□□ -0.98
SLIRP-211ENST00000557623 EIF3GO75821 320 aaKnown RBP eCLIP8.95□□□□□ -0.983e-6■□□□□ 9.7
SLIRP-211ENST00000557623 NMBP08949 121 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 ARL14EPLP0DKL9 152 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 TCTAP57738 103 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 ERCC8Q13216 396 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 C12orf74Q32Q52 190 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 AKR1C8PQ5T2L2 129 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 FAM222AQ5U5X8 452 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 GFI1BQ5VTD9 330 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 Q6ZTC4 211 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 ARL6IP6Q8N6S5 226 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 CMTM2Q8TAZ6 248 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 NIPSNAP3BQ9BS92 247 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 AGPAT4-IT1Q9H0P7 198 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 DKK2Q9UBU2 259 aa8.95□□□□□ -0.98
SLIRP-211ENST00000557623 YTHDF2Q9Y5A9 579 aaKnown RBP8.95□□□□□ -0.98
SLIRP-211ENST00000557623 STARD9Q9P2P6 4700 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 IGKV2-40A0A087WW87 121 aaPredicted RBP8.94□□□□□ -0.98
SLIRP-211ENST00000557623 TRBV7-9A0A0J9YWB2 115 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 PGPA6NDG6 321 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 J3KRW8 73 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 CXorf1O96002 111 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 IGKV2D-40P01614 121 aaPredicted RBP8.94□□□□□ -0.98
SLIRP-211ENST00000557623 CRISP2P16562 243 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 ZNF493Q6ZR52 646 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 CCDC28AQ8IWP9 274 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 OR11H4Q8NGC9 324 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 C16orf74Q96GX8 76 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 FAM19A4Q96LR4 140 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 VGLL1Q99990 258 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 CYTL1Q9NRR1 136 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 TMEM167BQ9NRX6 74 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 ZNF492Q9P255 531 aa8.94□□□□□ -0.98
SLIRP-211ENST00000557623 TRAV12-3A0A0B4J271 114 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 CTXND1A0A1B0GTU2 59 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 KANTRA0A1W2PQU2 76 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 C7orf71A4D174 169 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 LYRM9A8MSI8 78 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 KLLNB2CW77 178 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 DIRC3C9JPN6 131 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 GPX1P07203 203 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 HTN1P15515 57 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 GCHFRP30047 84 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 ZNF138P52744 262 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 KIR3DS1Q14943 382 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 Q6ZNX1 250 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 SUN5Q8TC36 379 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 TMEM263Q8WUH6 116 aaKnown RBP8.93□□□□□ -0.98
SLIRP-211ENST00000557623 HYLS1Q96M11 299 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 PYGO2Q9BRQ0 406 aa8.93□□□□□ -0.98
SLIRP-211ENST00000557623 DEFB131BA0A096LNP1 70 aa8.92□□□□□ -0.98
SLIRP-211ENST00000557623 AZU1P20160 251 aa8.92□□□□□ -0.98
SLIRP-211ENST00000557623 EIF5AP63241 154 aaKnown RBP8.92□□□□□ -0.98
SLIRP-211ENST00000557623 ZNF767PQ75MW2 155 aa8.92□□□□□ -0.98
SLIRP-211ENST00000557623 TMED6Q8WW62 240 aa8.92□□□□□ -0.98
SLIRP-211ENST00000557623 ST6GAL2Q96JF0 529 aa8.92□□□□□ -0.98
SLIRP-211ENST00000557623 LENEPQ9Y5L5 61 aa8.92□□□□□ -0.98
SLIRP-211ENST00000557623 SERTM2A0A1B0GWG4 89 aa8.91□□□□□ -0.98
SLIRP-211ENST00000557623 IGLL5B9A064 214 aa8.91□□□□□ -0.98
SLIRP-211ENST00000557623 BCL2L11O43521 198 aa8.91□□□□□ -0.98
SLIRP-211ENST00000557623 PRM2P04554 102 aa8.91□□□□□ -0.98
SLIRP-211ENST00000557623 RNASE4P34096 147 aaKnown RBP8.91□□□□□ -0.98
SLIRP-211ENST00000557623 DAD1P61803 113 aa8.91□□□□□ -0.98
SLIRP-211ENST00000557623 IQCF2Q8IXL9 164 aa8.91□□□□□ -0.98
SLIRP-211ENST00000557623 TCTE3Q8IZS6 198 aa8.91□□□□□ -0.98
SLIRP-211ENST00000557623 RNASE8Q8TDE3 154 aaKnown RBP8.91□□□□□ -0.98
SLIRP-211ENST00000557623 RPH3ALQ9UNE2 315 aa8.91□□□□□ -0.98
SLIRP-211ENST00000557623 TIMM8BQ9Y5J9 83 aaPredicted RBP8.91□□□□□ -0.98
SLIRP-211ENST00000557623 PLAC8L1A1L4L8 177 aa8.9□□□□□ -0.98
SLIRP-211ENST00000557623 PFDN1O60925 122 aa8.9□□□□□ -0.98
SLIRP-211ENST00000557623 ZNF324O75467 553 aaPredicted RBP8.9□□□□□ -0.98
SLIRP-211ENST00000557623 SEC11BP0C7V7 166 aa8.9□□□□□ -0.98
SLIRP-211ENST00000557623 CD300CQ08708 224 aa8.9□□□□□ -0.98
SLIRP-211ENST00000557623 BTN1A1Q13410 526 aa8.9□□□□□ -0.98
SLIRP-211ENST00000557623 ZFAND2AQ8N6M9 145 aa8.9□□□□□ -0.98
SLIRP-211ENST00000557623 C5orf17Q8NAS9 161 aa8.9□□□□□ -0.98
SLIRP-211ENST00000557623 LINC00476Q8WZB0 136 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms