RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 J3KRW8 73 aa11.36□□□□□ -0.59
TUBB3-214ENST00000557490 TMEM78Q5T7P6 136 aa11.36□□□□□ -0.59
TUBB3-214ENST00000557490 FAM222AQ5U5X8 452 aa11.36□□□□□ -0.59
TUBB3-214ENST00000557490 GFI1BQ5VTD9 330 aa11.36□□□□□ -0.59
TUBB3-214ENST00000557490 C9orf47Q6ZRZ4 202 aa11.36□□□□□ -0.59
TUBB3-214ENST00000557490 AGPAT4-IT1Q9H0P7 198 aa11.36□□□□□ -0.59
TUBB3-214ENST00000557490 DKK2Q9UBU2 259 aa11.36□□□□□ -0.59
TUBB3-214ENST00000557490 YTHDF2Q9Y5A9 579 aaKnown RBP11.36□□□□□ -0.59
TUBB3-214ENST00000557490 HECTD4Q9Y4D8 3996 aa11.35□□□□□ -0.59
TUBB3-214ENST00000557490 IGKV2-40A0A087WW87 121 aaPredicted RBP11.35□□□□□ -0.59
TUBB3-214ENST00000557490 HMGB3O15347 200 aaKnown RBP11.35□□□□□ -0.59
TUBB3-214ENST00000557490 IGKV2D-40P01614 121 aaPredicted RBP11.35□□□□□ -0.59
TUBB3-214ENST00000557490 PRM2P04554 102 aa11.35□□□□□ -0.59
TUBB3-214ENST00000557490 HTN1P15515 57 aa11.35□□□□□ -0.59
TUBB3-214ENST00000557490 KIR3DS1Q14943 382 aa11.35□□□□□ -0.59
TUBB3-214ENST00000557490 RXFP4Q8TDU9 374 aa11.35□□□□□ -0.59
TUBB3-214ENST00000557490 ACTR3CQ9C0K3 210 aaPredicted RBP11.35□□□□□ -0.59
TUBB3-214ENST00000557490 OTORQ9NRC9 128 aa11.35□□□□□ -0.59
TUBB3-214ENST00000557490 SLC25A5P05141 298 aaKnown RBP11.34□□□□□ -0.59
TUBB3-214ENST00000557490 FAM74A1Q5RGS3 127 aa11.34□□□□□ -0.59
TUBB3-214ENST00000557490 RAB24Q969Q5 203 aa11.34□□□□□ -0.59
TUBB3-214ENST00000557490 VGLL1Q99990 258 aa11.34□□□□□ -0.59
TUBB3-214ENST00000557490 NIPSNAP3BQ9BS92 247 aa11.34□□□□□ -0.59
TUBB3-214ENST00000557490 DEFB131BA0A096LNP1 70 aa11.33□□□□□ -0.6
TUBB3-214ENST00000557490 TRAV12-3A0A0B4J271 114 aa11.33□□□□□ -0.6
TUBB3-214ENST00000557490 IGLL5B9A064 214 aa11.33□□□□□ -0.6
TUBB3-214ENST00000557490 STAG3L2P0CL84 134 aa11.33□□□□□ -0.6
TUBB3-214ENST00000557490 STAG3L3P0CL85 134 aa11.33□□□□□ -0.6
TUBB3-214ENST00000557490 ARL14EPLP0DKL9 152 aa11.33□□□□□ -0.6
TUBB3-214ENST00000557490 AZU1P20160 251 aa11.33□□□□□ -0.6
TUBB3-214ENST00000557490 TCTAP57738 103 aa11.33□□□□□ -0.6
TUBB3-214ENST00000557490 CCDC28AQ8IWP9 274 aa11.33□□□□□ -0.6
TUBB3-214ENST00000557490 CMTM2Q8TAZ6 248 aa11.33□□□□□ -0.6
TUBB3-214ENST00000557490 C16orf74Q96GX8 76 aa11.33□□□□□ -0.6
TUBB3-214ENST00000557490 HYLS1Q96M11 299 aa11.33□□□□□ -0.6
TUBB3-214ENST00000557490 ABCA13Q86UQ4 5058 aa11.33□□□□□ -0.6
TUBB3-214ENST00000557490 C7orf71A4D174 169 aa11.32□□□□□ -0.6
TUBB3-214ENST00000557490 RBAKDNA6NC62 111 aa11.32□□□□□ -0.6
TUBB3-214ENST00000557490 PGPA6NDG6 321 aa11.32□□□□□ -0.6
TUBB3-214ENST00000557490 LYRM9A8MSI8 78 aa11.32□□□□□ -0.6
TUBB3-214ENST00000557490 NMBP08949 121 aa11.32□□□□□ -0.6
TUBB3-214ENST00000557490 ZNF138P52744 262 aa11.32□□□□□ -0.6
TUBB3-214ENST00000557490 DAD1P61803 113 aa11.32□□□□□ -0.6
TUBB3-214ENST00000557490 ZNF493Q6ZR52 646 aa11.32□□□□□ -0.6
TUBB3-214ENST00000557490 LINC00476Q8WZB0 136 aa11.32□□□□□ -0.6
TUBB3-214ENST00000557490 FAM19A4Q96LR4 140 aa11.32□□□□□ -0.6
TUBB3-214ENST00000557490 ARPC5LQ9BPX5 153 aa11.32□□□□□ -0.6
TUBB3-214ENST00000557490 ZNF492Q9P255 531 aa11.32□□□□□ -0.6
TUBB3-214ENST00000557490 HMSDA8MTL9 139 aa11.31□□□□□ -0.6
TUBB3-214ENST00000557490 KLLNB2CW77 178 aa11.31□□□□□ -0.6
TUBB3-214ENST00000557490 DIRC3C9JPN6 131 aa11.31□□□□□ -0.6
TUBB3-214ENST00000557490 LY6G6CO95867 125 aa11.31□□□□□ -0.6
TUBB3-214ENST00000557490 CXorf1O96002 111 aa11.31□□□□□ -0.6
TUBB3-214ENST00000557490 GPX1P07203 203 aa11.31□□□□□ -0.6
TUBB3-214ENST00000557490 CRISP2P16562 243 aa11.31□□□□□ -0.6
TUBB3-214ENST00000557490 GCHFRP30047 84 aa11.31□□□□□ -0.6
TUBB3-214ENST00000557490 RNASE4P34096 147 aaKnown RBP11.31□□□□□ -0.6
TUBB3-214ENST00000557490 ZNF345Q14585 488 aa11.31□□□□□ -0.6
TUBB3-214ENST00000557490 AKR1C8PQ5T2L2 129 aa11.31□□□□□ -0.6
TUBB3-214ENST00000557490 KCNRGQ8N5I3 272 aa11.31□□□□□ -0.6
TUBB3-214ENST00000557490 TMEM263Q8WUH6 116 aaKnown RBP11.31□□□□□ -0.6
TUBB3-214ENST00000557490 CYTL1Q9NRR1 136 aa11.31□□□□□ -0.6
TUBB3-214ENST00000557490 PLA2G2EQ9NZK7 142 aa11.31□□□□□ -0.6
TUBB3-214ENST00000557490 A0A0D9SG52 128 aa11.3□□□□□ -0.6
TUBB3-214ENST00000557490 OR11H4Q8NGC9 324 aa11.3□□□□□ -0.6
TUBB3-214ENST00000557490 PYGO2Q9BRQ0 406 aa11.3□□□□□ -0.6
TUBB3-214ENST00000557490 TMEM167BQ9NRX6 74 aa11.3□□□□□ -0.6
TUBB3-214ENST00000557490 RPH3ALQ9UNE2 315 aa11.3□□□□□ -0.6
TUBB3-214ENST00000557490 IGHV4-4A0A075B6R2 117 aa11.29□□□□□ -0.6
TUBB3-214ENST00000557490 TRBV7-9A0A0J9YWB2 115 aa11.29□□□□□ -0.6
TUBB3-214ENST00000557490 PLAC8L1A1L4L8 177 aa11.29□□□□□ -0.6
TUBB3-214ENST00000557490 HTN3P15516 51 aa11.29□□□□□ -0.6
TUBB3-214ENST00000557490 CD300CQ08708 224 aa11.29□□□□□ -0.6
TUBB3-214ENST00000557490 BTN1A1Q13410 526 aa11.29□□□□□ -0.6
TUBB3-214ENST00000557490 IQCF2Q8IXL9 164 aa11.29□□□□□ -0.6
TUBB3-214ENST00000557490 ARL6IP6Q8N6S5 226 aa11.29□□□□□ -0.6
TUBB3-214ENST00000557490 Q8TAT8 98 aa11.29□□□□□ -0.6
TUBB3-214ENST00000557490 RNASE8Q8TDE3 154 aaKnown RBP11.29□□□□□ -0.6
TUBB3-214ENST00000557490 TIMM8BQ9Y5J9 83 aaPredicted RBP11.29□□□□□ -0.6
TUBB3-214ENST00000557490 DNAH10Q8IVF4 4471 aa11.29□□□□□ -0.6
TUBB3-214ENST00000557490 CTXND1A0A1B0GTU2 59 aa11.28□□□□□ -0.6
TUBB3-214ENST00000557490 KANTRA0A1W2PQU2 76 aa11.28□□□□□ -0.6
TUBB3-214ENST00000557490 DEFB130BP0DP73 79 aa11.28□□□□□ -0.6
TUBB3-214ENST00000557490 DEFB130AP0DP74 79 aa11.28□□□□□ -0.6
TUBB3-214ENST00000557490 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
TUBB3-214ENST00000557490 SUN5Q8TC36 379 aa11.28□□□□□ -0.6
TUBB3-214ENST00000557490 ST6GAL2Q96JF0 529 aa11.28□□□□□ -0.6
TUBB3-214ENST00000557490 APLNQ9ULZ1 77 aa11.28□□□□□ -0.6
TUBB3-214ENST00000557490 KMT2AQ03164 3969 aa11.27□□□□□ -0.6
TUBB3-214ENST00000557490 ZNF324O75467 553 aaPredicted RBP11.27□□□□□ -0.61
TUBB3-214ENST00000557490 LGALS9CQ6DKI2 356 aa11.27□□□□□ -0.61
TUBB3-214ENST00000557490 Q6ZNX1 250 aa11.27□□□□□ -0.61
TUBB3-214ENST00000557490 GOLT1AQ6ZVE7 132 aa11.27□□□□□ -0.61
TUBB3-214ENST00000557490 SSX7Q7RTT5 188 aa11.27□□□□□ -0.61
TUBB3-214ENST00000557490 TMED6Q8WW62 240 aa11.27□□□□□ -0.61
TUBB3-214ENST00000557490 NOP10Q9NPE3 64 aaKnown RBP11.27□□□□□ -0.61
TUBB3-214ENST00000557490 LENEPQ9Y5L5 61 aa11.27□□□□□ -0.61
TUBB3-214ENST00000557490 CBY3A6NI87 242 aa11.26□□□□□ -0.61
TUBB3-214ENST00000557490 SNURFLB1AK76 121 aa11.26□□□□□ -0.61
TUBB3-214ENST00000557490 RGS13O14921 159 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms