RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 ERCC8Q13216 396 aa8.49□□□□□ -1.05
SYNE2-226ENST00000557084 RGS21Q2M5E4 152 aa8.49□□□□□ -1.05
SYNE2-226ENST00000557084 ACOT6Q3I5F7 207 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-226ENST00000557084 LINC00477Q96M19 166 aa8.49□□□□□ -1.05
SYNE2-226ENST00000557084 TIMM8BQ9Y5J9 83 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-226ENST00000557084 KMT2AQ03164 3969 aa8.48□□□□□ -1.05
SYNE2-226ENST00000557084 SLC25A5P05141 298 aaKnown RBP8.48□□□□□ -1.05
SYNE2-226ENST00000557084 RANP62826 216 aaKnown RBP8.48□□□□□ -1.05
SYNE2-226ENST00000557084 ZNF266Q14584 549 aa8.48□□□□□ -1.05
SYNE2-226ENST00000557084 KIR3DS1Q14943 382 aa8.48□□□□□ -1.05
SYNE2-226ENST00000557084 UBE2DNLQ8IWF7 75 aa8.48□□□□□ -1.05
SYNE2-226ENST00000557084 INO80EQ8NBZ0 244 aaPredicted RBP8.48□□□□□ -1.05
SYNE2-226ENST00000557084 TMEM263Q8WUH6 116 aaKnown RBP8.48□□□□□ -1.05
SYNE2-226ENST00000557084 ASB13Q8WXK3 278 aa8.48□□□□□ -1.05
SYNE2-226ENST00000557084 FXYD5Q96DB9 178 aa8.48□□□□□ -1.05
SYNE2-226ENST00000557084 WFDC1Q9HC57 220 aa8.48□□□□□ -1.05
SYNE2-226ENST00000557084 NOP10Q9NPE3 64 aaKnown RBP8.48□□□□□ -1.05
SYNE2-226ENST00000557084 IGKV2-40A0A087WW87 121 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-226ENST00000557084 SNURFLB1AK76 121 aa8.47□□□□□ -1.05
SYNE2-226ENST00000557084 F5H768 121 aa8.47□□□□□ -1.05
SYNE2-226ENST00000557084 IGKV2D-40P01614 121 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-226ENST00000557084 GPX1P07203 203 aa8.47□□□□□ -1.05
SYNE2-226ENST00000557084 GIPP09681 153 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-226ENST00000557084 M6PRP20645 277 aa8.47□□□□□ -1.05
SYNE2-226ENST00000557084 RNASE4P34096 147 aaKnown RBP8.47□□□□□ -1.05
SYNE2-226ENST00000557084 LYPD1Q8N2G4 141 aa8.47□□□□□ -1.05
SYNE2-226ENST00000557084 PHYHIPLQ96FC7 376 aa8.47□□□□□ -1.05
SYNE2-226ENST00000557084 AGPAT4-IT1Q9H0P7 198 aa8.47□□□□□ -1.05
SYNE2-226ENST00000557084 VPS13DQ5THJ4 4388 aa8.47□□□□□ -1.05
SYNE2-226ENST00000557084 BIRC6Q9NR09 4857 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 FXYD6-FXYD2A0A087WZ82 144 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 C7orf71A4D174 169 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 ATP5G1P05496 136 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 ATP5G3P48201 142 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 FAM74A1Q5RGS3 127 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 TMEM88Q6PEY1 159 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 C9orf47Q6ZRZ4 202 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 HSD17B11Q8NBQ5 300 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 OR10G4Q8NGN3 311 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 OR10G9Q8NGN4 311 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 OR10G7Q8NGN6 311 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 CMTM2Q8TAZ6 248 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 RNASE8Q8TDE3 154 aaKnown RBP8.46□□□□□ -1.06
SYNE2-226ENST00000557084 HYLS1Q96M11 299 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 AQP10Q96PS8 301 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 PYGO2Q9BRQ0 406 aa8.46□□□□□ -1.06
SYNE2-226ENST00000557084 CBY3A6NI87 242 aa8.45□□□□□ -1.06
SYNE2-226ENST00000557084 ZNF138P52744 262 aa8.45□□□□□ -1.06
SYNE2-226ENST00000557084 RAB2AP61019 212 aa8.45□□□□□ -1.06
SYNE2-226ENST00000557084 PQLC2Q6ZP29 291 aa8.45□□□□□ -1.06
SYNE2-226ENST00000557084 POM121L12Q8N7R1 296 aa8.45□□□□□ -1.06
SYNE2-226ENST00000557084 RXFP4Q8TDU9 374 aa8.45□□□□□ -1.06
SYNE2-226ENST00000557084 VGLL1Q99990 258 aa8.45□□□□□ -1.06
SYNE2-226ENST00000557084 Q9H3A6 140 aa8.45□□□□□ -1.06
SYNE2-226ENST00000557084 BORCS7-ASMTA0A0B4J1R7 106 aa8.44□□□□□ -1.06
SYNE2-226ENST00000557084 PLAC8L1A1L4L8 177 aa8.44□□□□□ -1.06
SYNE2-226ENST00000557084 RGS13O14921 159 aa8.44□□□□□ -1.06
SYNE2-226ENST00000557084 MBP02144 154 aa8.44□□□□□ -1.06
SYNE2-226ENST00000557084 NMBP08949 121 aa8.44□□□□□ -1.06
SYNE2-226ENST00000557084 CD300CQ08708 224 aa8.44□□□□□ -1.06
SYNE2-226ENST00000557084 BTN1A1Q13410 526 aa8.44□□□□□ -1.06
SYNE2-226ENST00000557084 C15orf53Q8NAA6 179 aa8.44□□□□□ -1.06
SYNE2-226ENST00000557084 ZNF680Q8NEM1 530 aa8.44□□□□□ -1.06
SYNE2-226ENST00000557084 OR2T35Q8NGX2 323 aa8.44□□□□□ -1.06
SYNE2-226ENST00000557084 ZNF492Q9P255 531 aa8.44□□□□□ -1.06
SYNE2-226ENST00000557084 GAGE12BA1L429 117 aa8.43□□□□□ -1.06
SYNE2-226ENST00000557084 KLLNB2CW77 178 aa8.43□□□□□ -1.06
SYNE2-226ENST00000557084 HMGB3O15347 200 aaKnown RBP8.43□□□□□ -1.06
SYNE2-226ENST00000557084 EIF3GO75821 320 aaKnown RBP eCLIP8.43□□□□□ -1.06
SYNE2-226ENST00000557084 GAGE7O76087 117 aa8.43□□□□□ -1.06
SYNE2-226ENST00000557084 GAGE12FP0CL80 117 aa8.43□□□□□ -1.06
SYNE2-226ENST00000557084 GAGE12GP0CL81 117 aa8.43□□□□□ -1.06
SYNE2-226ENST00000557084 GAGE12IP0CL82 117 aa8.43□□□□□ -1.06
SYNE2-226ENST00000557084 CRISP2P16562 243 aa8.43□□□□□ -1.06
SYNE2-226ENST00000557084 Q5BKY6 102 aa8.43□□□□□ -1.06
SYNE2-226ENST00000557084 EIF4E3Q8N5X7 224 aaKnown RBP8.43□□□□□ -1.06
SYNE2-226ENST00000557084 Q8TAT8 98 aa8.43□□□□□ -1.06
SYNE2-226ENST00000557084 ZNF503Q96F45 646 aa8.43□□□□□ -1.06
SYNE2-226ENST00000557084 ATG101Q9BSB4 218 aa8.43□□□□□ -1.06
SYNE2-226ENST00000557084 OTORQ9NRC9 128 aa8.43□□□□□ -1.06
SYNE2-226ENST00000557084 RPH3ALQ9UNE2 315 aa8.43□□□□□ -1.06
SYNE2-226ENST00000557084 TRGV2A0A075B6R0 118 aa8.42□□□□□ -1.06
SYNE2-226ENST00000557084 RBAKDNA6NC62 111 aa8.42□□□□□ -1.06
SYNE2-226ENST00000557084 PGPA6NDG6 321 aa8.42□□□□□ -1.06
SYNE2-226ENST00000557084 NUDT3O95989 172 aa8.42□□□□□ -1.06
SYNE2-226ENST00000557084 ATP6V0CP27449 155 aa8.42□□□□□ -1.06
SYNE2-226ENST00000557084 CDC34P49427 236 aaPredicted RBP8.42□□□□□ -1.06
SYNE2-226ENST00000557084 SERF2P84101 59 aa8.42□□□□□ -1.06
SYNE2-226ENST00000557084 OR5I1Q13606 314 aa8.42□□□□□ -1.06
SYNE2-226ENST00000557084 OR2G3Q8NGZ4 309 aa8.42□□□□□ -1.06
SYNE2-226ENST00000557084 FAM19A4Q96LR4 140 aa8.42□□□□□ -1.06
SYNE2-226ENST00000557084 ARPC5LQ9BPX5 153 aa8.42□□□□□ -1.06
SYNE2-226ENST00000557084 PSMG3Q9BT73 122 aaPredicted RBP8.42□□□□□ -1.06
SYNE2-226ENST00000557084 TRBV7-9A0A0J9YWB2 115 aa8.41□□□□□ -1.06
SYNE2-226ENST00000557084 DIRC3C9JPN6 131 aa8.41□□□□□ -1.06
SYNE2-226ENST00000557084 ZNF324O75467 553 aaPredicted RBP8.41□□□□□ -1.06
SYNE2-226ENST00000557084 ARL14EPLP0DKL9 152 aa8.41□□□□□ -1.06
SYNE2-226ENST00000557084 DAZ2Q13117 558 aaKnown RBP8.41□□□□□ -1.06
SYNE2-226ENST00000557084 RNF212Q495C1 297 aa8.41□□□□□ -1.06
SYNE2-226ENST00000557084 IQCF2Q8IXL9 164 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms