RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 TRAV8-6A0A0B4J262 113 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 A0A0J9YXV3 536 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 C9JCJ5 164 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 GABARAPH6UMI1 98 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 LECT2O14960 151 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 GABARAPO95166 117 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 IGHV3-53P01767 116 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 AKR1C2P52895 323 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 TCL1AP56279 114 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 TSPAN5P62079 268 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 CD300CQ08708 224 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 FGL1Q08830 312 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 FFAR4Q5NUL3 377 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 CST9LP1Q5W188 147 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 THAP8Q8NA92 274 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 OR5H2Q8NGV7 314 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 PCNPQ8WW12 178 aaKnown RBP3□□□□□ -1.93
SCFD1-223ENST00000557076 BAALCQ8WXS3 180 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 SLC25A31Q9H0C2 315 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 DUSP21Q9H596 190 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 SLC25A22Q9H936 323 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 S100A14Q9HCY8 104 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 IFT46Q9NQC8 304 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 C8orf4Q9NR00 106 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 SCN3BQ9NY72 215 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 KLF12Q9Y4X4 402 aa3□□□□□ -1.93
SCFD1-223ENST00000557076 A0A087X0K7 114 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 TRAV12-3A0A0B4J271 114 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 TRGV4A0A0C4DH28 118 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 A0A0G2JRQ6 117 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 C3orf85A0A1B0GTC6 90 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 CEBPZOSA8MTT3 80 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 B3GALNT1O75752 331 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 CDS2O95674 445 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 PFN1P07737 140 aaKnown RBP2.99□□□□□ -1.93
SCFD1-223ENST00000557076 CT45A10P0DMU9 189 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 RPL7P18124 248 aaKnown RBP2.99□□□□□ -1.93
SCFD1-223ENST00000557076 GATA2P23769 480 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-223ENST00000557076 HRH1P35367 487 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 ZNF846Q147U1 533 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 VWC2Q2TAL6 325 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 TRIM16LQ309B1 348 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 IBA57Q5T440 356 aaKnown RBP2.99□□□□□ -1.93
SCFD1-223ENST00000557076 GPR107Q5VW38 600 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 Q75L30 129 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 PACRGLQ8N7B6 248 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 LRRC20Q8TCA0 184 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 RASL10AQ92737 203 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 SLC25A38Q96DW6 304 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 ZNF486Q96H40 463 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-223ENST00000557076 ODF3Q96PU9 254 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 TP53RKQ96S44 253 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 FXYD6Q9H0Q3 95 aa2.99□□□□□ -1.93
SCFD1-223ENST00000557076 IGKV1OR2-108A0A075B7D4 117 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 TRAV8-1A0A0A6YYK1 113 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 MEIS3P1A6NDR6 274 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 IGHV3-30P01768 117 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 IGHV3-33P01772 117 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 SLC25A5P05141 298 aaKnown RBP2.98□□□□□ -1.93
SCFD1-223ENST00000557076 CFC1BP0CG36 223 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 CFC1P0CG37 223 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 IGHV3-30-3P0DP02 117 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 IGHV3-30-5P0DP03 117 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 ORM2P19652 201 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 CXCL2P19875 107 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 HLA-DMAP28067 261 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 LEPP41159 167 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 PIGPP57054 158 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 C22orf42Q6IC83 251 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 LGI3Q8N145 548 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 ARRDC1Q8N5I2 433 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 EIF4E3Q8N5X7 224 aaKnown RBP2.98□□□□□ -1.93
SCFD1-223ENST00000557076 OR10G4Q8NGN3 311 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 OR5H6Q8NGV6 325 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 ATP6V0E2Q8NHE4 81 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 SLC35E1Q96K37 410 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 SHANK2-AS3Q9BTD1 123 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 TMEM147Q9BVK8 224 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 NDUFB11Q9NX14 153 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 TPRKBQ9Y3C4 175 aa2.98□□□□□ -1.93
SCFD1-223ENST00000557076 TRAV34A0A0B4J273 112 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 SMIM30A4D0T7 59 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 CRYM-AS1A6NIL9 109 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 KLLNB2CW77 178 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 CCNKO75909 580 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 NMBP08949 121 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 SFTA3P0C7M3 94 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 PGAM2P15259 253 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 PRSS3P35030 304 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 RCVRNP35243 200 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 MEF2DQ14814 521 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 SP6Q3SY56 376 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 C14orf177Q52M58 125 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 OR10J3Q5JRS4 329 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 SDIM1Q6ZPB5 146 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 PRSS48Q7RTY5 328 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 S100A7AQ86SG5 101 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 BPIFCQ8NFQ6 507 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 OR1S1Q8NH92 325 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 RNASE11Q8TAA1 199 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms