RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SAPCD1Q5SSQ6 148 aa3.42□□□□□ -1.86
SRP54-212ENST00000556992 CLEC19AQ6UXS0 136 aa3.42□□□□□ -1.86
SRP54-212ENST00000556992 FAM231DQ6ZW35 169 aa3.42□□□□□ -1.86
SRP54-212ENST00000556992 ZFP82Q8N141 532 aa3.42□□□□□ -1.86
SRP54-212ENST00000556992 GRAMD2BQ96HH9 432 aa3.42□□□□□ -1.86
SRP54-212ENST00000556992 IGF2BP2-AS1Q96M15 143 aa3.42□□□□□ -1.86
SRP54-212ENST00000556992 LINC00479Q96M42 142 aa3.42□□□□□ -1.86
SRP54-212ENST00000556992 METTL26Q96S19 204 aa3.42□□□□□ -1.86
SRP54-212ENST00000556992 SAV1Q9H4B6 383 aaPredicted RBP3.42□□□□□ -1.86
SRP54-212ENST00000556992 GNB4Q9HAV0 340 aa3.42□□□□□ -1.86
SRP54-212ENST00000556992 CLEC5AQ9NY25 188 aa3.42□□□□□ -1.86
SRP54-212ENST00000556992 SOX21Q9Y651 276 aaPredicted RBP3.42□□□□□ -1.86
SRP54-212ENST00000556992 S4R3C0 116 aa3.42□□□□□ -1.86
SRP54-212ENST00000556992 COL6A5A8TX70 2615 aa3.42□□□□□ -1.86
SRP54-212ENST00000556992 USF3Q68DE3 2245 aa3.42□□□□□ -1.86
SRP54-212ENST00000556992 KIAA2026Q5HYC2 2103 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 DSCAMO60469 2012 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.41□□□□□ -1.86
SRP54-212ENST00000556992 TRAV34A0A0B4J273 112 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 A0A1W2PPQ1 181 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 SMIM27A0A1W2PRY6 76 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 A0A1W2PS18 150 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 FAM231BA6NCW3 169 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 PGPEP1LA6NFU8 196 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 ZNF705GA8MUZ8 300 aaPredicted RBP3.41□□□□□ -1.86
SRP54-212ENST00000556992 NDUFA4O00483 81 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 MRPS12O15235 138 aaKnown RBP3.41□□□□□ -1.86
SRP54-212ENST00000556992 BUB3O43684 328 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 GATCO43716 136 aaKnown RBP3.41□□□□□ -1.86
SRP54-212ENST00000556992 LTAP01374 205 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 IGLV2-8P01709 118 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 IGHV4-59P01825 116 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 SNRPCP09234 159 aaKnown RBP3.41□□□□□ -1.86
SRP54-212ENST00000556992 HNF1AP20823 631 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 ARL3P36405 182 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 NDUFA6P56556 154 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 TPPP2P59282 170 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 SLC35B1P78383 322 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 OR5I1Q13606 314 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 FAM106AQ4KMX7 169 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 IBA57Q5T440 356 aaKnown RBP3.41□□□□□ -1.86
SRP54-212ENST00000556992 WDR73Q6P4I2 378 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 SIGLEC15Q6ZMC9 328 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 TMEM183AQ8IXX5 376 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 OR4X2Q8NGF9 303 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 NPFFR1Q9GZQ6 430 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 ZNF492Q9P255 531 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 VPREB3Q9UKI3 123 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 TRAPPC1Q9Y5R8 145 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 V9GYV3 84 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 ARFGEF3Q5TH69 2177 aa3.41□□□□□ -1.86
SRP54-212ENST00000556992 DIDO1Q9BTC0 2240 aaKnown RBP3.4□□□□□ -1.86
SRP54-212ENST00000556992 A0A087X0K7 114 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 IZUMO1RA6ND01 250 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 A8MWL6 223 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 H3BTX0 84 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 K7EMT4 169 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 SLC17A3O00476 420 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 UBE2CO00762 179 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 HIST1H2BKO60814 126 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 P01737 135 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 IGHG4P01861 327 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 MT-ND6P03923 174 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 S100A8P05109 93 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 HIST1H2BJP06899 126 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 TRGC1P0CF51 173 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 HIST1H2BOP23527 126 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 HIST1H2BBP33778 126 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 CDX1P47902 265 aaPredicted RBP3.4□□□□□ -1.87
SRP54-212ENST00000556992 HIST1H2BDP58876 126 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 HILS1P60008 231 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 HIST1H2BCP62807 126 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 GNG5P63218 68 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 FABP9Q0Z7S8 132 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 SCGB2A2Q13296 93 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 PSG3Q16557 428 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 HIST2H2BEQ16778 126 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.4□□□□□ -1.87
SRP54-212ENST00000556992 LCN12Q6JVE5 192 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 RASL11AQ6T310 242 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 GOLT1AQ6ZVE7 132 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 PRNTQ86SH4 94 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 EXOC3-AS1Q8N2X6 119 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 TMEM86BQ8N661 226 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 TMEM75Q8N9X5 138 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 MAPK1IP1LQ8NDC0 245 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 OR4B1Q8NGF8 309 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 TSKUQ8WUA8 353 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 FRZBQ92765 325 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 HIST1H2BHQ93079 126 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 C17orf77Q96MU5 243 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 NOL4LQ96MY1 436 aaPredicted RBP3.4□□□□□ -1.87
SRP54-212ENST00000556992 HIST1H2BNQ99877 126 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 HIST1H2BMQ99879 126 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 FOXC2Q99958 501 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 SLC50A1Q9BRV3 221 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 GNB1LQ9BYB4 327 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 GFRA4Q9GZZ7 299 aa3.4□□□□□ -1.87
SRP54-212ENST00000556992 RNASE7Q9H1E1 156 aaKnown RBP3.4□□□□□ -1.87
SRP54-212ENST00000556992 ZNF331Q9NQX6 463 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms