RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 ZNF705BP0CI00 300 aaPredicted RBP7.19□□□□□ -1.26
TMEM260-213ENST00000556929 AKR1C3P42330 323 aa7.19□□□□□ -1.26
TMEM260-213ENST00000556929 CNN1P51911 297 aaKnown RBP7.19□□□□□ -1.26
TMEM260-213ENST00000556929 NUTF2P61970 127 aaKnown RBP7.19□□□□□ -1.26
TMEM260-213ENST00000556929 UBE2G1P62253 170 aa7.19□□□□□ -1.26
TMEM260-213ENST00000556929 PEA15Q15121 130 aa7.19□□□□□ -1.26
TMEM260-213ENST00000556929 MORN3Q6PF18 240 aaPredicted RBP7.19□□□□□ -1.26
TMEM260-213ENST00000556929 TRPT1Q86TN4 253 aaKnown RBP7.19□□□□□ -1.26
TMEM260-213ENST00000556929 TMEM75Q8N9X5 138 aa7.19□□□□□ -1.26
TMEM260-213ENST00000556929 CLUHP3Q96NS8 147 aa7.19□□□□□ -1.26
TMEM260-213ENST00000556929 CITED4Q96RK1 184 aa7.19□□□□□ -1.26
TMEM260-213ENST00000556929 RARRES2Q99969 163 aa7.19□□□□□ -1.26
TMEM260-213ENST00000556929 SMDT1Q9H4I9 107 aa7.19□□□□□ -1.26
TMEM260-213ENST00000556929 SCO2A0A1W2PP80 73 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 RAB19A4D1S5 217 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 TMEM250H0YL14 139 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 IGKV3-20P01619 116 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 IGHV4-30-4P0DP06 118 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 PRB4P10163 310 aaPredicted RBP7.18□□□□□ -1.26
TMEM260-213ENST00000556929 ZNF138P52744 262 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 FLI1Q01543 452 aaPredicted RBP7.18□□□□□ -1.26
TMEM260-213ENST00000556929 ERCC8Q13216 396 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 DEFB121Q5J5C9 76 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 FMC1Q96HJ9 113 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 NDFIP1Q9BT67 221 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 AGPAT4-IT1Q9H0P7 198 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 MED9Q9NWA0 146 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 ZNF492Q9P255 531 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 LENEPQ9Y5L5 61 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 AGRNO00468 2067 aa7.18□□□□□ -1.26
TMEM260-213ENST00000556929 A8MTW9 85 aa7.17□□□□□ -1.26
TMEM260-213ENST00000556929 K7EIL1 84 aa7.17□□□□□ -1.26
TMEM260-213ENST00000556929 AMBPP02760 352 aa7.17□□□□□ -1.26
TMEM260-213ENST00000556929 PRB2P02812 416 aaPredicted RBP7.17□□□□□ -1.26
TMEM260-213ENST00000556929 RPL35AP18077 110 aaKnown RBP7.17□□□□□ -1.26
TMEM260-213ENST00000556929 TSPOP30536 169 aa7.17□□□□□ -1.26
TMEM260-213ENST00000556929 LEPP41159 167 aa7.17□□□□□ -1.26
TMEM260-213ENST00000556929 APOC4P55056 127 aa7.17□□□□□ -1.26
TMEM260-213ENST00000556929 C11orf52Q96A22 123 aa7.17□□□□□ -1.26
TMEM260-213ENST00000556929 ODF3Q96PU9 254 aa7.17□□□□□ -1.26
TMEM260-213ENST00000556929 VGLL1Q99990 258 aa7.17□□□□□ -1.26
TMEM260-213ENST00000556929 C1QTNF4Q9BXJ3 329 aa7.17□□□□□ -1.26
TMEM260-213ENST00000556929 PSG8Q9UQ74 426 aa7.17□□□□□ -1.26
TMEM260-213ENST00000556929 TRAV8-1A0A0A6YYK1 113 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 TRBV7-9A0A0J9YWB2 115 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 TRBV6-1A0A0K0K1D8 114 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 SRP19P09132 144 aaKnown RBP7.16□□□□□ -1.26
TMEM260-213ENST00000556929 CT45A10P0DMU9 189 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 CDKN1BP46527 198 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 TAS2R60P59551 318 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 TMEM183BQ1AE95 376 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 SAPCD1Q5SSQ6 148 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 PRNTQ86SH4 94 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 MRAPQ8TCY5 172 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 C2CD4CQ8TF44 421 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 SGK494Q96LW2 274 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 LINC00479Q96M42 142 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 CSTL1Q9H114 145 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 TREM1Q9NP99 234 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 KLF12Q9Y4X4 402 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 NOTCH3Q9UM47 2321 aa7.16□□□□□ -1.26
TMEM260-213ENST00000556929 TRAV34A0A0B4J273 112 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 KIR2DL5BA0A0G2JN68 375 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 KIR2DL5BA0A0G2JPC4 375 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 LINC00862A6NCI5 91 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 UBE2CO00762 179 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 GPX1P07203 203 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 FRMD6-AS1P0C7T7 363 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 RPL35P42766 123 aaKnown RBP7.15□□□□□ -1.26
TMEM260-213ENST00000556929 CEBPGP53567 150 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 UQCC3Q6UW78 93 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 AMTNQ6UX39 209 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 LINC00322Q6ZN03 302 aaPredicted RBP7.15□□□□□ -1.26
TMEM260-213ENST00000556929 KIR2DL5AQ8N109 375 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 KIR2DL5BQ8NHK3 375 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 Q8TAT8 98 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 SLC35B3Q9H1N7 401 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 ZFP30Q9Y2G7 519 aa7.15□□□□□ -1.26
TMEM260-213ENST00000556929 RBMY1BA6NDE4 496 aaKnown RBP7.14□□□□□ -1.27
TMEM260-213ENST00000556929 RBMY1EA6NEQ0 496 aaKnown RBP7.14□□□□□ -1.27
TMEM260-213ENST00000556929 CA1P00915 261 aaPredicted RBP7.14□□□□□ -1.27
TMEM260-213ENST00000556929 IGLV2-11P01706 119 aa7.14□□□□□ -1.27
TMEM260-213ENST00000556929 RBMY1DP0C7P1 496 aaKnown RBP7.14□□□□□ -1.27
TMEM260-213ENST00000556929 CRISP2P16562 243 aa7.14□□□□□ -1.27
TMEM260-213ENST00000556929 GNG4P50150 75 aa7.14□□□□□ -1.27
TMEM260-213ENST00000556929 FXYD7P58549 80 aa7.14□□□□□ -1.27
TMEM260-213ENST00000556929 SRSF3P84103 164 aaKnown RBP7.14□□□□□ -1.27
TMEM260-213ENST00000556929 DEFA6Q01524 100 aa7.14□□□□□ -1.27
TMEM260-213ENST00000556929 SPINK13Q1W4C9 94 aa7.14□□□□□ -1.27
TMEM260-213ENST00000556929 ZNF674Q2M3X9 581 aa7.14□□□□□ -1.27
TMEM260-213ENST00000556929 Q86TA4 180 aa7.14□□□□□ -1.27
TMEM260-213ENST00000556929 COMMD7Q86VX2 200 aa7.14□□□□□ -1.27
TMEM260-213ENST00000556929 FAM19A4Q96LR4 140 aa7.14□□□□□ -1.27
TMEM260-213ENST00000556929 PARLQ9H300 379 aa7.14□□□□□ -1.27
TMEM260-213ENST00000556929 C9JCJ5 164 aa7.13□□□□□ -1.27
TMEM260-213ENST00000556929 J3KRW8 73 aa7.13□□□□□ -1.27
TMEM260-213ENST00000556929 M0R2Z0 102 aa7.13□□□□□ -1.27
TMEM260-213ENST00000556929 INSP01308 110 aa7.13□□□□□ -1.27
TMEM260-213ENST00000556929 LTAP01374 205 aa7.13□□□□□ -1.27
TMEM260-213ENST00000556929 FAM74A3Q4VXF1 159 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms