RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SEC22CQ9BRL7 303 aa10.11□□□□□ -0.79
CHD8-211ENST00000556833 GGACTQ9BVM4 153 aa10.11□□□□□ -0.79
CHD8-211ENST00000556833 SLC39A9Q9NUM3 307 aa10.11□□□□□ -0.79
CHD8-211ENST00000556833 UQCC1Q9NVA1 299 aa10.11□□□□□ -0.79
CHD8-211ENST00000556833 ICOSQ9Y6W8 199 aa10.11□□□□□ -0.79
CHD8-211ENST00000556833 TRBV19A0A075B6N1 114 aa10.1□□□□□ -0.79
CHD8-211ENST00000556833 TRAV6A0A075B6T7 132 aa10.1□□□□□ -0.79
CHD8-211ENST00000556833 NDUFB4O95168 129 aa10.1□□□□□ -0.79
CHD8-211ENST00000556833 ERVFC1-1P60608 527 aa10.1□□□□□ -0.79
CHD8-211ENST00000556833 GUK1Q16774 197 aa10.1□□□□□ -0.79
CHD8-211ENST00000556833 GCSAMLQ5JQS6 135 aa10.1□□□□□ -0.79
CHD8-211ENST00000556833 FAM122CQ6P4D5 195 aa10.1□□□□□ -0.79
CHD8-211ENST00000556833 EIF4E3Q8N5X7 224 aaKnown RBP10.1□□□□□ -0.79
CHD8-211ENST00000556833 C8orf49Q96NF6 230 aa10.1□□□□□ -0.79
CHD8-211ENST00000556833 AGPAT4-IT1Q9H0P7 198 aa10.1□□□□□ -0.79
CHD8-211ENST00000556833 C20orf85Q9H1P6 137 aa10.1□□□□□ -0.79
CHD8-211ENST00000556833 WDR83OSQ9Y284 106 aa10.1□□□□□ -0.79
CHD8-211ENST00000556833 TIMM9Q9Y5J7 89 aa10.1□□□□□ -0.79
CHD8-211ENST00000556833 IGSF23A1L1A6 192 aa10.09□□□□□ -0.79
CHD8-211ENST00000556833 CENPXA8MT69 81 aa10.09□□□□□ -0.79
CHD8-211ENST00000556833 RGS13O14921 159 aa10.09□□□□□ -0.79
CHD8-211ENST00000556833 ZNF324O75467 553 aaPredicted RBP10.09□□□□□ -0.79
CHD8-211ENST00000556833 GPX1P07203 203 aa10.09□□□□□ -0.79
CHD8-211ENST00000556833 FGF7P21781 194 aa10.09□□□□□ -0.79
CHD8-211ENST00000556833 Q8TAT8 98 aa10.09□□□□□ -0.79
CHD8-211ENST00000556833 PFDN5Q99471 154 aa10.09□□□□□ -0.79
CHD8-211ENST00000556833 VGLL1Q99990 258 aa10.09□□□□□ -0.79
CHD8-211ENST00000556833 KLLNB2CW77 178 aa10.08□□□□□ -0.8
CHD8-211ENST00000556833 EREGO14944 169 aa10.08□□□□□ -0.8
CHD8-211ENST00000556833 SPINK4O60575 86 aa10.08□□□□□ -0.8
CHD8-211ENST00000556833 PRAF2O60831 178 aa10.08□□□□□ -0.8
CHD8-211ENST00000556833 MPDU1O75352 247 aa10.08□□□□□ -0.8
CHD8-211ENST00000556833 INAFM2P0DMQ5 153 aa10.08□□□□□ -0.8
CHD8-211ENST00000556833 IL7P13232 177 aa10.08□□□□□ -0.8
CHD8-211ENST00000556833 TCL1AP56279 114 aa10.08□□□□□ -0.8
CHD8-211ENST00000556833 ICAM4Q14773 271 aa10.08□□□□□ -0.8
CHD8-211ENST00000556833 RBM38Q9H0Z9 239 aaKnown RBP10.08□□□□□ -0.8
CHD8-211ENST00000556833 FAT1Q14517 4588 aa10.07□□□□□ -0.8
CHD8-211ENST00000556833 E5RGE8 158 aa10.07□□□□□ -0.8
CHD8-211ENST00000556833 SMR3BP02814 79 aaPredicted RBP10.07□□□□□ -0.8
CHD8-211ENST00000556833 SFTA3P0C7M3 94 aa10.07□□□□□ -0.8
CHD8-211ENST00000556833 XGP55808 180 aa10.07□□□□□ -0.8
CHD8-211ENST00000556833 KRTAP10-1P60331 282 aa10.07□□□□□ -0.8
CHD8-211ENST00000556833 MUC21Q5SSG8 566 aa10.07□□□□□ -0.8
CHD8-211ENST00000556833 Q5VSD8 79 aa10.07□□□□□ -0.8
CHD8-211ENST00000556833 ST6GAL2Q96JF0 529 aa10.07□□□□□ -0.8
CHD8-211ENST00000556833 FAM19A4Q96LR4 140 aa10.07□□□□□ -0.8
CHD8-211ENST00000556833 ARPC5LQ9BPX5 153 aa10.07□□□□□ -0.8
CHD8-211ENST00000556833 C11orf1Q9H5F2 150 aa10.07□□□□□ -0.8
CHD8-211ENST00000556833 PTTG2Q9NZH5 202 aa10.07□□□□□ -0.8
CHD8-211ENST00000556833 FLG2Q5D862 2391 aaPredicted RBP10.07□□□□□ -0.8
CHD8-211ENST00000556833 ZNF253O75346 499 aa10.06□□□□□ -0.8
CHD8-211ENST00000556833 HIST1H1EP10412 219 aaKnown RBP10.06□□□□□ -0.8
CHD8-211ENST00000556833 RPL29P47914 159 aaKnown RBP10.06□□□□□ -0.8
CHD8-211ENST00000556833 ANXA2RQ3ZCQ2 193 aa10.06□□□□□ -0.8
CHD8-211ENST00000556833 WFDC10BQ8IUB3 73 aa10.06□□□□□ -0.8
CHD8-211ENST00000556833 LYPD1Q8N2G4 141 aa10.06□□□□□ -0.8
CHD8-211ENST00000556833 ZFAND2AQ8N6M9 145 aa10.06□□□□□ -0.8
CHD8-211ENST00000556833 THAP6Q8TBB0 222 aa10.06□□□□□ -0.8
CHD8-211ENST00000556833 MRPL53Q96EL3 112 aaKnown RBP10.06□□□□□ -0.8
CHD8-211ENST00000556833 LINC00477Q96M19 166 aa10.06□□□□□ -0.8
CHD8-211ENST00000556833 SLC25A2Q9BXI2 301 aa10.06□□□□□ -0.8
CHD8-211ENST00000556833 GPN1Q9HCN4 374 aaPredicted RBP10.06□□□□□ -0.8
CHD8-211ENST00000556833 IGHV1OR15-1A0A075B7D0 117 aa10.05□□□□□ -0.8
CHD8-211ENST00000556833 OR10J4P0C629 311 aa10.05□□□□□ -0.8
CHD8-211ENST00000556833 SULT1A1P50225 295 aa10.05□□□□□ -0.8
CHD8-211ENST00000556833 CRYBA4P53673 196 aa10.05□□□□□ -0.8
CHD8-211ENST00000556833 RAB32Q13637 225 aa10.05□□□□□ -0.8
CHD8-211ENST00000556833 TMEM78Q5T7P6 136 aa10.05□□□□□ -0.8
CHD8-211ENST00000556833 LYPD5Q6UWN5 251 aa10.05□□□□□ -0.8
CHD8-211ENST00000556833 MIR17HGQ75NE6 70 aa10.05□□□□□ -0.8
CHD8-211ENST00000556833 C12orf45Q8N5I9 185 aaPredicted RBP10.05□□□□□ -0.8
CHD8-211ENST00000556833 AAMDCQ9H7C9 122 aa10.05□□□□□ -0.8
CHD8-211ENST00000556833 PGPEP1Q9NXJ5 209 aa10.05□□□□□ -0.8
CHD8-211ENST00000556833 MDFICQ9P1T7 246 aa10.05□□□□□ -0.8
CHD8-211ENST00000556833 PRO0255Q9UI72 69 aa10.05□□□□□ -0.8
CHD8-211ENST00000556833 HHLA3Q9XRX5 114 aa10.05□□□□□ -0.8
CHD8-211ENST00000556833 A0A087WTM6 91 aa10.04□□□□□ -0.8
CHD8-211ENST00000556833 TRGV4A0A0C4DH28 118 aa10.04□□□□□ -0.8
CHD8-211ENST00000556833 PLA2G10O15496 165 aa10.04□□□□□ -0.8
CHD8-211ENST00000556833 LYRM1O43325 122 aa10.04□□□□□ -0.8
CHD8-211ENST00000556833 PVALBP20472 110 aaPredicted RBP10.04□□□□□ -0.8
CHD8-211ENST00000556833 FHL2Q14192 279 aa10.04□□□□□ -0.8
CHD8-211ENST00000556833 VWC2Q2TAL6 325 aa10.04□□□□□ -0.8
CHD8-211ENST00000556833 STX12Q86Y82 276 aa10.04□□□□□ -0.8
CHD8-211ENST00000556833 TMEM252Q8N6L7 170 aa10.04□□□□□ -0.8
CHD8-211ENST00000556833 C2orf50Q96LR7 162 aa10.04□□□□□ -0.8
CHD8-211ENST00000556833 C18orf15Q96N68 181 aa10.04□□□□□ -0.8
CHD8-211ENST00000556833 LINC00467Q9BRT7 94 aa10.04□□□□□ -0.8
CHD8-211ENST00000556833 LYRM2Q9NU23 88 aaPredicted RBP10.04□□□□□ -0.8
CHD8-211ENST00000556833 NUDT15Q9NV35 164 aa10.04□□□□□ -0.8
CHD8-211ENST00000556833 TMEM14CQ9P0S9 112 aa10.04□□□□□ -0.8
CHD8-211ENST00000556833 PRELID1Q9Y255 219 aa10.04□□□□□ -0.8
CHD8-211ENST00000556833 IFNA5P01569 189 aa10.03□□□□□ -0.8
CHD8-211ENST00000556833 TCRBP04435 133 aa10.03□□□□□ -0.8
CHD8-211ENST00000556833 CRISP2P16562 243 aa10.03□□□□□ -0.8
CHD8-211ENST00000556833 S100A11P31949 105 aa10.03□□□□□ -0.8
CHD8-211ENST00000556833 ZNF415Q09FC8 603 aa10.03□□□□□ -0.8
CHD8-211ENST00000556833 IBA57Q5T440 356 aaKnown RBP10.03□□□□□ -0.8
CHD8-211ENST00000556833 C9orf47Q6ZRZ4 202 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms