RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 SLC25A39Q9BZJ4 359 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-243ENST00000556671 ARV1Q9H2C2 271 aa3.42□□□□□ -1.86
ATXN3-243ENST00000556671 NRN1Q9NPD7 142 aa3.42□□□□□ -1.86
ATXN3-243ENST00000556671 LYRM2Q9NU23 88 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-243ENST00000556671 MED9Q9NWA0 146 aa3.42□□□□□ -1.86
ATXN3-243ENST00000556671 CLEC5AQ9NY25 188 aa3.42□□□□□ -1.86
ATXN3-243ENST00000556671 FXYD6-FXYD2A0A087WZ82 144 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 FNDC10F2Z333 226 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 C17orf112F2Z3M2 114 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 DEFB4AO15263 64 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 PRSS1P07477 247 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 ZNF705DP0CH99 300 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-243ENST00000556671 ZNF705BP0CI00 300 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-243ENST00000556671 RPL7P18124 248 aaKnown RBP3.41□□□□□ -1.86
ATXN3-243ENST00000556671 NKX2-5P52952 324 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-243ENST00000556671 RAB14P61106 215 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 B2MP61769 119 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 IL15RAQ13261 267 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 UBE2V1Q13404 147 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 CLLU1Q5K131 121 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 C1orf194Q5T5A4 169 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 PATE2Q6UY27 113 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 Q75L30 129 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 ZNF546Q86UE3 836 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 RNF182Q8N6D2 247 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 INO80EQ8NBZ0 244 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-243ENST00000556671 ZNF738Q8NE65 137 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 OR11H7Q8NGC8 314 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 OR1L4Q8NGR5 311 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 OR11H2Q8NH07 326 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 SUN5Q8TC36 379 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 BLNKQ8WV28 456 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 RARRES2Q99969 163 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 TM2D3Q9BRN9 247 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 RPRMQ9NS64 109 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 SLC39A9Q9NUM3 307 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 MBD2Q9UBB5 411 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 XCL2Q9UBD3 114 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 TIMM9Q9Y5J7 89 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 PXMP4Q9Y6I8 212 aa3.41□□□□□ -1.86
ATXN3-243ENST00000556671 TRAV2A0A0B4J234 112 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 A0A1B0GVY2 172 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 A0A1W2PPV4 95 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 ZNF705FA8MVS1 300 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-243ENST00000556671 F6UB75 175 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 SMLR1H3BR10 107 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 MPDU1O75352 247 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 HTN1P15515 57 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 HLA-DMBP28068 263 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 MEOX2P50222 304 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 EMP1P54849 157 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 NUTF2P61970 127 aaKnown RBP3.4□□□□□ -1.87
ATXN3-243ENST00000556671 SNRPEP62304 92 aaKnown RBP3.4□□□□□ -1.87
ATXN3-243ENST00000556671 GAGE5Q13069 117 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 GAGE6Q13070 117 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 FFAR4Q5NUL3 377 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 FAM78BQ5VT40 261 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 TEX261Q6UWH6 196 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 LINC00322Q6ZN03 302 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-243ENST00000556671 BPIFA4PQ86YQ2 179 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 C9orf62Q8N4C0 152 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 OCC1Q8TAD7 63 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 DCANP1Q8TF63 244 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 TMEM37Q8WXS4 190 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 C17orf77Q96MU5 243 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 GPR82Q96P67 336 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 PFDN5Q99471 154 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 LITAFQ99732 161 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 ATP5SQ99766 215 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 OVOL2Q9BRP0 275 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 SHANK2-AS3Q9BTD1 123 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 TMEM208Q9BTX3 173 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 C11orf1Q9H5F2 150 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 RNF24Q9Y225 148 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 WDR83OSQ9Y284 106 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 HSPB11Q9Y547 144 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 RFNGQ9Y644 331 aa3.4□□□□□ -1.87
ATXN3-243ENST00000556671 KIR2DL5BA0A0G2JN68 375 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 KIR2DL5BA0A0G2JPC4 375 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 A0A0J9YWU9 116 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 HMSDA8MTL9 139 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 H3BRN7 92 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 ISLRO14498 428 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 HMGB3O15347 200 aaKnown RBP3.39□□□□□ -1.87
ATXN3-243ENST00000556671 OR7C2O60412 319 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 EIF3GO75821 320 aaKnown RBP eCLIP3.39□□□□□ -1.87
ATXN3-243ENST00000556671 GIPP09681 153 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-243ENST00000556671 OR10J4P0C629 311 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 SPP1P10451 314 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 RPL29P47914 159 aaKnown RBP3.39□□□□□ -1.87
ATXN3-243ENST00000556671 PSMB3P49720 205 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 PSG9Q00887 426 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 HIST1H1AQ02539 215 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-243ENST00000556671 OPCMLQ14982 345 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 PSG3Q16557 428 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 Q5BKY6 102 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 GCSAMLQ5JQS6 135 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 GDF5OSQ5U4N7 250 aa3.39□□□□□ -1.87
ATXN3-243ENST00000556671 MORN3Q6PF18 240 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-243ENST00000556671 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms