RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 SPATA12Q7Z6I5 190 aa4.81□□□□□ -1.64
CPSF2-205ENST00000556622 LRRC75A-AS1Q8N1F1 130 aa4.81□□□□□ -1.64
CPSF2-205ENST00000556622 GATD1Q8NB37 220 aa4.81□□□□□ -1.64
CPSF2-205ENST00000556622 LY6G5BQ8NDX9 201 aa4.81□□□□□ -1.64
CPSF2-205ENST00000556622 OR1N2Q8NGR9 330 aa4.81□□□□□ -1.64
CPSF2-205ENST00000556622 OR10AG1Q8NH19 301 aa4.81□□□□□ -1.64
CPSF2-205ENST00000556622 PRSS3P2Q8NHM4 247 aa4.81□□□□□ -1.64
CPSF2-205ENST00000556622 RNF125Q96EQ8 232 aa4.81□□□□□ -1.64
CPSF2-205ENST00000556622 KLK15Q9H2R5 256 aa4.81□□□□□ -1.64
CPSF2-205ENST00000556622 HIF1ANQ9NWT6 349 aa4.81□□□□□ -1.64
CPSF2-205ENST00000556622 PLCE1Q9P212 2302 aa4.81□□□□□ -1.64
CPSF2-205ENST00000556622 ITPR3Q14573 2671 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 LOC105371242A0A075B767 164 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 LINC01549A6NIU2 74 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 I3L2K1 104 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 NDUFA3O95167 84 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 CDKN1AP38936 164 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 CTRLP40313 264 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 Q5PR19 223 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 HCP5Q6MZN7 132 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 SLC25A34Q6PIV7 304 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 PRSS57Q6UWY2 283 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 ZNF493Q6ZR52 646 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 TCF24Q7RTU0 167 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 Q86TA4 180 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 TTC9CQ8N5M4 171 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 WFDC11Q8NEX6 87 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 SLC50A1Q9BRV3 221 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 NPFFR1Q9GZQ6 430 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 LPAR2Q9HBW0 351 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 ONECUT1Q9UBC0 465 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 RABAC1Q9UI14 185 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 TP53TG3Q9ULZ0 132 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 F8P00451 2351 aa4.8□□□□□ -1.64
CPSF2-205ENST00000556622 MAP1AP78559 2803 aaPredicted RBP4.8□□□□□ -1.64
CPSF2-205ENST00000556622 WI2-2373I1.2A0A1W2PRP0 233 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 TMEM189A5PLL7 270 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 RBAKDNA6NC62 111 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 CGB1A6NKQ9 187 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 LY6LH3BQJ8 138 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 H3BRN7 92 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 SYS1-DBNDD2H3BUS1 97 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 NUPR1O60356 82 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 SNRPCP09234 159 aaKnown RBP4.79□□□□□ -1.64
CPSF2-205ENST00000556622 TSPOP30536 169 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 SLC35B1P78383 322 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 SLAQ13239 276 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 KIAA1644Q3SXP7 199 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 SPRNQ5BIV9 151 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 SAMD13Q5VXD3 122 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 DUX4L9Q6RFH8 374 aaPredicted RBP4.79□□□□□ -1.64
CPSF2-205ENST00000556622 LYPD2Q6UXB3 125 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 PRNTQ86SH4 94 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 ORMDL3Q8N138 153 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 MRPL53Q96EL3 112 aaKnown RBP4.79□□□□□ -1.64
CPSF2-205ENST00000556622 PGLYRP4Q96LB8 373 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 AP1S3Q96PC3 154 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 ASCL2Q99929 193 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 TMEM208Q9BTX3 173 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 C21orf62Q9NYP8 219 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 CTSZQ9UBR2 303 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 SMPXQ9UHP9 88 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 PSG8Q9UQ74 426 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 ACANP16112 2415 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 DSCAML1Q8TD84 2053 aa4.79□□□□□ -1.64
CPSF2-205ENST00000556622 TEP1Q99973 2627 aaKnown RBP4.78□□□□□ -1.64
CPSF2-205ENST00000556622 CSMD1Q96PZ7 3565 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 CSMD2Q7Z408 3487 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 HRNRQ86YZ3 2850 aaPredicted RBP4.78□□□□□ -1.64
CPSF2-205ENST00000556622 TRAV34A0A0B4J273 112 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 A6NDN8 102 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 OR4C46A6NHA9 309 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 TEX22C9J3V5 150 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 SIVA1O15304 175 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 NDUFS7O75251 213 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 PPP1R17O96001 155 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 IL4P05112 153 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 MYOD1P15172 320 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 SEC11AP67812 179 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 HOXA4Q00056 320 aaPredicted RBP4.78□□□□□ -1.64
CPSF2-205ENST00000556622 HIST1H1AQ02539 215 aaPredicted RBP4.78□□□□□ -1.64
CPSF2-205ENST00000556622 RELQ04864 619 aaPredicted RBP4.78□□□□□ -1.64
CPSF2-205ENST00000556622 EBI3Q14213 229 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 HES1Q14469 280 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 BATFQ16520 125 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 C5orf64Q2M2E5 130 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 Q56UQ5 140 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 C16orf54Q6UWD8 224 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 GOLT1AQ6ZVE7 132 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 C11orf42Q8N5U0 333 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 ZNF491Q8N8L2 437 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 ARPC1AQ92747 370 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 FBXL15Q9H469 300 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 NXT2Q9NPJ8 142 aaKnown RBP4.78□□□□□ -1.64
CPSF2-205ENST00000556622 RPH3ALQ9UNE2 315 aa4.78□□□□□ -1.64
CPSF2-205ENST00000556622 RAI1Q7Z5J4 1906 aaPredicted RBP4.78□□□□□ -1.64
CPSF2-205ENST00000556622 TRBV7-1A0A0A6YYK4 115 aa4.77□□□□□ -1.65
CPSF2-205ENST00000556622 C2orf70A6NJV1 201 aa4.77□□□□□ -1.65
CPSF2-205ENST00000556622 FABP5P3A8MUU1 101 aa4.77□□□□□ -1.65
CPSF2-205ENST00000556622 K7EMI3 77 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms