RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SAV1Q9H4B6 383 aaPredicted RBP6.88□□□□□ -1.31
ACTN1-218ENST00000556343 MAP6D1Q9H9H5 199 aa6.88□□□□□ -1.31
ACTN1-218ENST00000556343 STAB1Q9NY15 2570 aa6.88□□□□□ -1.31
ACTN1-218ENST00000556343 TRRAPQ9Y4A5 3859 aa6.87□□□□□ -1.31
ACTN1-218ENST00000556343 IGKV2-40A0A087WW87 121 aaPredicted RBP6.87□□□□□ -1.31
ACTN1-218ENST00000556343 TRAV34A0A0B4J273 112 aa6.87□□□□□ -1.31
ACTN1-218ENST00000556343 A0A0J9YX75 114 aa6.87□□□□□ -1.31
ACTN1-218ENST00000556343 PRAC2D3DTV9 90 aa6.87□□□□□ -1.31
ACTN1-218ENST00000556343 NPIPB6E9PJ23 425 aa6.87□□□□□ -1.31
ACTN1-218ENST00000556343 IGKV2D-40P01614 121 aaPredicted RBP6.87□□□□□ -1.31
ACTN1-218ENST00000556343 LEPP41159 167 aa6.87□□□□□ -1.31
ACTN1-218ENST00000556343 NUTF2P61970 127 aaKnown RBP6.87□□□□□ -1.31
ACTN1-218ENST00000556343 PNRC1Q12796 327 aaPredicted RBP6.87□□□□□ -1.31
ACTN1-218ENST00000556343 ERCC8Q13216 396 aa6.87□□□□□ -1.31
ACTN1-218ENST00000556343 ACTL10Q5JWF8 245 aa6.87□□□□□ -1.31
ACTN1-218ENST00000556343 FAM24BQ8N5W8 94 aa6.87□□□□□ -1.31
ACTN1-218ENST00000556343 OR4B1Q8NGF8 309 aa6.87□□□□□ -1.31
ACTN1-218ENST00000556343 DAZAP1Q96EP5 407 aaKnown RBP6.87□□□□□ -1.31
ACTN1-218ENST00000556343 TVP23CQ96ET8 276 aa6.87□□□□□ -1.31
ACTN1-218ENST00000556343 ODF3Q96PU9 254 aa6.87□□□□□ -1.31
ACTN1-218ENST00000556343 ZNF492Q9P255 531 aa6.87□□□□□ -1.31
ACTN1-218ENST00000556343 LTAP01374 205 aa6.86□□□□□ -1.31
ACTN1-218ENST00000556343 AMBPP02760 352 aa6.86□□□□□ -1.31
ACTN1-218ENST00000556343 MGST1P10620 155 aaKnown RBP6.86□□□□□ -1.31
ACTN1-218ENST00000556343 HLA-DRB4P13762 266 aa6.86□□□□□ -1.31
ACTN1-218ENST00000556343 SMUG1Q53HV7 270 aa6.86□□□□□ -1.31
ACTN1-218ENST00000556343 CENPWQ5EE01 88 aa6.86□□□□□ -1.31
ACTN1-218ENST00000556343 TMEM183AQ8IXX5 376 aa6.86□□□□□ -1.31
ACTN1-218ENST00000556343 SVBPQ8N300 66 aa6.86□□□□□ -1.31
ACTN1-218ENST00000556343 SGK494Q96LW2 274 aa6.86□□□□□ -1.31
ACTN1-218ENST00000556343 LINC00479Q96M42 142 aa6.86□□□□□ -1.31
ACTN1-218ENST00000556343 CLUHP3Q96NS8 147 aa6.86□□□□□ -1.31
ACTN1-218ENST00000556343 VGLL1Q99990 258 aa6.86□□□□□ -1.31
ACTN1-218ENST00000556343 AGPAT4-IT1Q9H0P7 198 aa6.86□□□□□ -1.31
ACTN1-218ENST00000556343 HLA-DRB4X5D2U9 266 aa6.86□□□□□ -1.31
ACTN1-218ENST00000556343 NOTCH3Q9UM47 2321 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 TRAV8-1A0A0A6YYK1 113 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 KNCNA6PVL3 124 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 B4DEV8 164 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 F6UB75 175 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 H3BMM0 161 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 M0R036 132 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 SNAPINO95295 136 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 APOC3P02656 99 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 CD7P09564 240 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 ODF3L2Q3SX64 289 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 OXLD1Q5BKU9 147 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 C10orf91Q5T1B1 145 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 MORN3Q6PF18 240 aaPredicted RBP6.85□□□□□ -1.31
ACTN1-218ENST00000556343 Q86TA4 180 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 APRG1Q8IVJ8 170 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 OCC1Q8TAD7 63 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 PRR25Q96S07 402 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 ASCL2Q99929 193 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 TUBA4BQ9H853 241 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 SDF2L1Q9HCN8 221 aa6.85□□□□□ -1.31
ACTN1-218ENST00000556343 CARHSP1Q9Y2V2 147 aaKnown RBP6.85□□□□□ -1.31
ACTN1-218ENST00000556343 PPP1R2P9O14990 202 aa6.84□□□□□ -1.31
ACTN1-218ENST00000556343 IGLV2-11P01706 119 aa6.84□□□□□ -1.31
ACTN1-218ENST00000556343 GPX1P07203 203 aa6.84□□□□□ -1.31
ACTN1-218ENST00000556343 ZNF705DP0CH99 300 aaPredicted RBP6.84□□□□□ -1.31
ACTN1-218ENST00000556343 ZNF705BP0CI00 300 aaPredicted RBP6.84□□□□□ -1.31
ACTN1-218ENST00000556343 EGFEM1PQ0D2K5 195 aa6.84□□□□□ -1.31
ACTN1-218ENST00000556343 ADIRFQ15847 76 aa6.84□□□□□ -1.31
ACTN1-218ENST00000556343 COX8CQ7Z4L0 72 aa6.84□□□□□ -1.31
ACTN1-218ENST00000556343 C15orf54Q8N8G6 183 aa6.84□□□□□ -1.31
ACTN1-218ENST00000556343 IGF2BP2-AS1Q96M15 143 aa6.84□□□□□ -1.31
ACTN1-218ENST00000556343 DERL1Q9BUN8 251 aa6.84□□□□□ -1.31
ACTN1-218ENST00000556343 FABP5P3A8MUU1 101 aa6.83□□□□□ -1.32
ACTN1-218ENST00000556343 GCGP01275 180 aa6.83□□□□□ -1.32
ACTN1-218ENST00000556343 IGKV3-20P01619 116 aa6.83□□□□□ -1.32
ACTN1-218ENST00000556343 MT-ND4LP03901 98 aa6.83□□□□□ -1.32
ACTN1-218ENST00000556343 CRISP2P16562 243 aa6.83□□□□□ -1.32
ACTN1-218ENST00000556343 CDKN1BP46527 198 aa6.83□□□□□ -1.32
ACTN1-218ENST00000556343 ERVFC1-1P60608 527 aa6.83□□□□□ -1.32
ACTN1-218ENST00000556343 RPL23P62829 140 aaKnown RBP6.83□□□□□ -1.32
ACTN1-218ENST00000556343 FAM162BQ5T6X4 162 aa6.83□□□□□ -1.32
ACTN1-218ENST00000556343 SAMD5Q5TGI4 173 aa6.83□□□□□ -1.32
ACTN1-218ENST00000556343 LINC01551Q86U37 167 aa6.83□□□□□ -1.32
ACTN1-218ENST00000556343 C1QTNF4Q9BXJ3 329 aa6.83□□□□□ -1.32
ACTN1-218ENST00000556343 SRD5A3Q9H8P0 318 aa6.83□□□□□ -1.32
ACTN1-218ENST00000556343 SORL1Q92673 2214 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 CMYA5Q8N3K9 4069 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 LOC102724200A0A096LPH7 203 aaPredicted RBP6.82□□□□□ -1.32
ACTN1-218ENST00000556343 TRAV21A0A0B4J279 112 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 XKRY2A2RUG3 117 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 G3V4G9 280 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 ATP6V1G1O75348 118 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 P01737 135 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 RNASE4P34096 147 aaKnown RBP6.82□□□□□ -1.32
ACTN1-218ENST00000556343 DEFB1P60022 68 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 GDF5OSQ5U4N7 250 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 PRR27Q6MZM9 219 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 TRPT1Q86TN4 253 aaKnown RBP6.82□□□□□ -1.32
ACTN1-218ENST00000556343 DEFB125Q8N687 156 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 NHLRC2Q8NBF2 726 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 Q8TAT8 98 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 ANAPC16Q96DE5 110 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 FAM19A4Q96LR4 140 aa6.82□□□□□ -1.32
ACTN1-218ENST00000556343 C20orf144Q9BQM9 153 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms