RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 ZNF546Q86UE3 836 aa7.28□□□□□ -1.24
SYNE2-221ENST00000556342 TOMM5Q8N4H5 51 aa7.28□□□□□ -1.24
SYNE2-221ENST00000556342 C11orf72Q8NBR9 251 aa7.28□□□□□ -1.24
SYNE2-221ENST00000556342 SAT2Q96F10 170 aaPredicted RBP7.28□□□□□ -1.24
SYNE2-221ENST00000556342 SMIM8Q96KF7 97 aa7.28□□□□□ -1.24
SYNE2-221ENST00000556342 MGAT4CQ9UBM8 478 aa7.28□□□□□ -1.24
SYNE2-221ENST00000556342 ICOSQ9Y6W8 199 aa7.28□□□□□ -1.24
SYNE2-221ENST00000556342 H3BQ15 152 aa7.27□□□□□ -1.25
SYNE2-221ENST00000556342 GOSR2O14653 212 aa7.27□□□□□ -1.25
SYNE2-221ENST00000556342 AGPAT2O15120 278 aa7.27□□□□□ -1.25
SYNE2-221ENST00000556342 COX7A2P2O60397 106 aa7.27□□□□□ -1.25
SYNE2-221ENST00000556342 ZNF324O75467 553 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-221ENST00000556342 SMR3BP02814 79 aaPredicted RBP7.27□□□□□ -1.25
SYNE2-221ENST00000556342 OPCMLQ14982 345 aa7.27□□□□□ -1.25
SYNE2-221ENST00000556342 OR10P1Q8NGE3 313 aa7.27□□□□□ -1.25
SYNE2-221ENST00000556342 TMEM37Q8WXS4 190 aa7.27□□□□□ -1.25
SYNE2-221ENST00000556342 SLIRPQ9GZT3 109 aaKnown RBP7.27□□□□□ -1.25
SYNE2-221ENST00000556342 C7orf71A4D174 169 aa7.26□□□□□ -1.25
SYNE2-221ENST00000556342 SPINK4O60575 86 aa7.26□□□□□ -1.25
SYNE2-221ENST00000556342 IGHV3-53P01767 116 aa7.26□□□□□ -1.25
SYNE2-221ENST00000556342 SLC25A5P05141 298 aaKnown RBP7.26□□□□□ -1.25
SYNE2-221ENST00000556342 GCSHP23434 173 aa7.26□□□□□ -1.25
SYNE2-221ENST00000556342 TCL1AP56279 114 aa7.26□□□□□ -1.25
SYNE2-221ENST00000556342 ANXA2RQ3ZCQ2 193 aa7.26□□□□□ -1.25
SYNE2-221ENST00000556342 RAB2BQ8WUD1 216 aa7.26□□□□□ -1.25
SYNE2-221ENST00000556342 ST6GAL2Q96JF0 529 aa7.26□□□□□ -1.25
SYNE2-221ENST00000556342 LINC00467Q9BRT7 94 aa7.26□□□□□ -1.25
SYNE2-221ENST00000556342 MRPS26Q9BYN8 205 aaKnown RBP7.26□□□□□ -1.25
SYNE2-221ENST00000556342 PRO0255Q9UI72 69 aa7.26□□□□□ -1.25
SYNE2-221ENST00000556342 KLF12Q9Y4X4 402 aa7.26□□□□□ -1.25
SYNE2-221ENST00000556342 TRAV9-2A0A087WT02 112 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 C9orf170A2RU37 121 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 KLLNB2CW77 178 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 TSC22D2O75157 780 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 TAS2R30P59541 319 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 UBE2MP61081 183 aaKnown RBP7.25□□□□□ -1.25
SYNE2-221ENST00000556342 HAMPP81172 84 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 ARL16Q0P5N6 197 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 GUK1Q16774 197 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 RNF151Q2KHN1 245 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 PYDC2Q56P42 97 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 C10orf113Q5VZT2 155 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 LYPD5Q6UWN5 251 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 Q6ZSN1 163 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 EIF4E3Q8N5X7 224 aaKnown RBP7.25□□□□□ -1.25
SYNE2-221ENST00000556342 DEDD2Q8WXF8 326 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 MGST2Q99735 147 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 BCL7BQ9BQE9 202 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 MSRB1Q9NZV6 116 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 LY96Q9Y6Y9 160 aa7.25□□□□□ -1.25
SYNE2-221ENST00000556342 TRAV5A0A0B4J249 113 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 M0R3E3 92 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 SCGB1D2O95969 90 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 OR4E1P0C645 316 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 CRYBA4P53673 196 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 TMBIM6P55061 237 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 CD300CQ08708 224 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 ERCC8Q13216 396 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 SLAQ13239 276 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 BTN1A1Q13410 526 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 MRPL23Q16540 153 aaKnown RBP7.24□□□□□ -1.25
SYNE2-221ENST00000556342 IBA57Q5T440 356 aaKnown RBP7.24□□□□□ -1.25
SYNE2-221ENST00000556342 MRPL53Q96EL3 112 aaKnown RBP7.24□□□□□ -1.25
SYNE2-221ENST00000556342 FAM19A4Q96LR4 140 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 VGLL1Q99990 258 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 GGACTQ9BVM4 153 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 DNAJC4Q9NNZ3 241 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 MRPL16Q9NX20 251 aaKnown RBP7.24□□□□□ -1.25
SYNE2-221ENST00000556342 V9GYH0 126 aa7.24□□□□□ -1.25
SYNE2-221ENST00000556342 K7EP13 123 aa7.23□□□□□ -1.25
SYNE2-221ENST00000556342 PRAF2O60831 178 aa7.23□□□□□ -1.25
SYNE2-221ENST00000556342 ZNF253O75346 499 aa7.23□□□□□ -1.25
SYNE2-221ENST00000556342 FHL2Q14192 279 aa7.23□□□□□ -1.25
SYNE2-221ENST00000556342 NEGR1Q7Z3B1 354 aa7.23□□□□□ -1.25
SYNE2-221ENST00000556342 WFDC10BQ8IUB3 73 aa7.23□□□□□ -1.25
SYNE2-221ENST00000556342 LINC00477Q96M19 166 aa7.23□□□□□ -1.25
SYNE2-221ENST00000556342 TMEM70Q9BUB7 260 aa7.23□□□□□ -1.25
SYNE2-221ENST00000556342 TP53TG3Q9ULZ0 132 aa7.23□□□□□ -1.25
SYNE2-221ENST00000556342 HHLA3Q9XRX5 114 aa7.23□□□□□ -1.25
SYNE2-221ENST00000556342 RCL1Q9Y2P8 373 aaKnown RBP7.23□□□□□ -1.25
SYNE2-221ENST00000556342 MPDU1O75352 247 aa7.22□□□□□ -1.25
SYNE2-221ENST00000556342 CRISP2P16562 243 aa7.22□□□□□ -1.25
SYNE2-221ENST00000556342 EVI2AP22794 236 aa7.22□□□□□ -1.25
SYNE2-221ENST00000556342 RNASE4P34096 147 aaKnown RBP7.22□□□□□ -1.25
SYNE2-221ENST00000556342 CAMLGP49069 296 aa7.22□□□□□ -1.25
SYNE2-221ENST00000556342 IAH1Q2TAA2 248 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-221ENST00000556342 Q6ZRG5 221 aa7.22□□□□□ -1.25
SYNE2-221ENST00000556342 AGPAT4-IT1Q9H0P7 198 aa7.22□□□□□ -1.25
SYNE2-221ENST00000556342 TRBV19A0A075B6N1 114 aa7.21□□□□□ -1.26
SYNE2-221ENST00000556342 IGLV5-52A0A0A0MRZ9 124 aa7.21□□□□□ -1.26
SYNE2-221ENST00000556342 C7orf66A4D0T2 115 aa7.21□□□□□ -1.26
SYNE2-221ENST00000556342 K7EQD1 137 aa7.21□□□□□ -1.26
SYNE2-221ENST00000556342 NMBP08949 121 aa7.21□□□□□ -1.26
SYNE2-221ENST00000556342 SRIP30626 198 aa7.21□□□□□ -1.26
SYNE2-221ENST00000556342 MIC13Q5XKP0 118 aa7.21□□□□□ -1.26
SYNE2-221ENST00000556342 NRARPQ7Z6K4 114 aa7.21□□□□□ -1.26
SYNE2-221ENST00000556342 ZFAND2AQ8N6M9 145 aa7.21□□□□□ -1.26
SYNE2-221ENST00000556342 OR1L4Q8NGR5 311 aa7.21□□□□□ -1.26
SYNE2-221ENST00000556342 PFDN5Q99471 154 aa7.21□□□□□ -1.26
SYNE2-221ENST00000556342 MRPL32Q9BYC8 188 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms