RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 TRAV3A0A0B4J244 114 aa1.3□□□□□ -2.2
CDKN3-210ENST00000556305 AIPO00170 330 aa1.3□□□□□ -2.2
CDKN3-210ENST00000556305 LYZL6O75951 148 aa1.3□□□□□ -2.2
CDKN3-210ENST00000556305 NDUFC2O95298 119 aa1.3□□□□□ -2.2
CDKN3-210ENST00000556305 HOXA6P31267 233 aa1.3□□□□□ -2.2
CDKN3-210ENST00000556305 SERPINB9P50453 376 aa1.3□□□□□ -2.2
CDKN3-210ENST00000556305 FAM19A2Q8N3H0 131 aa1.3□□□□□ -2.2
CDKN3-210ENST00000556305 C3orf56Q8N813 242 aa1.3□□□□□ -2.2
CDKN3-210ENST00000556305 LINC00526Q96FQ7 95 aa1.3□□□□□ -2.2
CDKN3-210ENST00000556305 PSTPIP2Q9H939 334 aa1.3□□□□□ -2.2
CDKN3-210ENST00000556305 PYCARDQ9ULZ3 195 aa1.3□□□□□ -2.2
CDKN3-210ENST00000556305 SCN10AQ9Y5Y9 1956 aa1.3□□□□□ -2.2
CDKN3-210ENST00000556305 ABCA9Q8IUA7 1624 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 ABCA6Q8N139 1617 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.29□□□□□ -2.2
CDKN3-210ENST00000556305 KIF1BO60333 1816 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 SBF1O95248 1867 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 LOC110117498A0A087WWA1 95 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 TRBV6-8A0A0A6YYG3 113 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 IGKV1-9A0A0C4DH69 117 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 CST8O60676 142 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 GGCTO75223 188 aaKnown RBP1.29□□□□□ -2.2
CDKN3-210ENST00000556305 PRB4P10163 310 aaPredicted RBP1.29□□□□□ -2.2
CDKN3-210ENST00000556305 SRIP30626 198 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 ATP5G3P48201 142 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 TAF1AQ15573 450 aaPredicted RBP1.29□□□□□ -2.2
CDKN3-210ENST00000556305 C22orf39Q6P5X5 142 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 Q8N814 137 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 PXT1Q8NFP0 134 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 TMEM254Q8TBM7 123 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 ZNF418Q8TF45 676 aaPredicted RBP1.29□□□□□ -2.2
CDKN3-210ENST00000556305 STOML2Q9UJZ1 356 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 ALPK2Q86TB3 2170 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 AKAP9Q99996 3911 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 PRKDCP78527 4128 aaKnown RBP1.29□□□□□ -2.2
CDKN3-210ENST00000556305 TAF1LQ8IZX4 1826 aa1.29□□□□□ -2.2
CDKN3-210ENST00000556305 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.2
CDKN3-210ENST00000556305 A8MWV9 139 aa1.28□□□□□ -2.2
CDKN3-210ENST00000556305 DYNLT1P63172 113 aa1.28□□□□□ -2.2
CDKN3-210ENST00000556305 SCGB2B2Q4G0G5 96 aa1.28□□□□□ -2.2
CDKN3-210ENST00000556305 C1orf137Q5JT78 98 aa1.28□□□□□ -2.2
CDKN3-210ENST00000556305 TEX261Q6UWH6 196 aa1.28□□□□□ -2.2
CDKN3-210ENST00000556305 OR2T35Q8NGX2 323 aa1.28□□□□□ -2.2
CDKN3-210ENST00000556305 CANT1Q8WVQ1 401 aa1.28□□□□□ -2.2
CDKN3-210ENST00000556305 GPER1Q99527 375 aa1.28□□□□□ -2.2
CDKN3-210ENST00000556305 U3KQ87 197 aa1.28□□□□□ -2.2
CDKN3-210ENST00000556305 ANKRD26Q9UPS8 1709 aa1.28□□□□□ -2.2
CDKN3-210ENST00000556305 AHCTF1Q8WYP5 2266 aa1.28□□□□□ -2.2
CDKN3-210ENST00000556305 COL6A6A6NMZ7 2263 aa1.27□□□□□ -2.21
CDKN3-210ENST00000556305 ALPK3Q96L96 1907 aa1.27□□□□□ -2.21
CDKN3-210ENST00000556305 PLCH1Q4KWH8 1693 aa1.27□□□□□ -2.21
CDKN3-210ENST00000556305 NCOA2Q15596 1464 aa1.27□□□□□ -2.21
CDKN3-210ENST00000556305 C1orf167Q5SNV9 1468 aa1.27□□□□□ -2.21
CDKN3-210ENST00000556305 PLEKHH2Q8IVE3 1493 aa1.27□□□□□ -2.21
CDKN3-210ENST00000556305 KDM6AO15550 1401 aaPredicted RBP1.27□□□□□ -2.21
CDKN3-210ENST00000556305 G3V2T6 193 aa1.27□□□□□ -2.21
CDKN3-210ENST00000556305 TAX1BP3O14907 124 aa1.27□□□□□ -2.21
CDKN3-210ENST00000556305 NDUFB3O43676 98 aa1.27□□□□□ -2.21
CDKN3-210ENST00000556305 TIMM17BO60830 172 aa1.27□□□□□ -2.21
CDKN3-210ENST00000556305 GADD45GO95257 159 aa1.27□□□□□ -2.21
CDKN3-210ENST00000556305 DHFRP00374 187 aa1.27□□□□□ -2.21
CDKN3-210ENST00000556305 RNASE4P34096 147 aaKnown RBP1.27□□□□□ -2.21
CDKN3-210ENST00000556305 TMEM70Q9BUB7 260 aa1.27□□□□□ -2.21
CDKN3-210ENST00000556305 CNTRLQ7Z7A1 2325 aa1.27□□□□□ -2.21
CDKN3-210ENST00000556305 DIDO1Q9BTC0 2240 aaKnown RBP1.27□□□□□ -2.21
CDKN3-210ENST00000556305 KIAA1551Q9HCM1 1747 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 NWD2Q9ULI1 1742 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 QRICH2Q9H0J4 1663 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 PXDNQ92626 1479 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 CCDC160A6NGH7 325 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 M0R2N4 97 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 ATG12O94817 140 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 CYBAP13498 195 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 NCALDP61601 193 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 UBE2BP63146 152 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 KRTAP20-1Q3LI63 56 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 AKR1C8PQ5T2L2 129 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 HACD4Q5VWC8 232 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 EIF5AL1Q6IS14 154 aaKnown RBP1.26□□□□□ -2.21
CDKN3-210ENST00000556305 DHRS4L2Q6PKH6 230 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 C2orf82Q6UX34 121 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 TMED4Q7Z7H5 227 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 S100A7AQ86SG5 101 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 PDZD9Q8IXQ8 264 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 CLECL1Q8IZS7 167 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 STAG3L4Q8TBR4 150 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 TEX37Q96LM6 180 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 SLC25A21Q9BQT8 299 aaPredicted RBP1.26□□□□□ -2.21
CDKN3-210ENST00000556305 TMEM126AQ9H061 195 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 LY96Q9Y6Y9 160 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 DENND4CQ5VZ89 1909 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 ITSN1Q15811 1721 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 KNDC1Q76NI1 1749 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 NRAPQ86VF7 1730 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 CLTCQ00610 1675 aaKnown RBP1.26□□□□□ -2.21
CDKN3-210ENST00000556305 LAMC1P11047 1609 aa1.26□□□□□ -2.21
CDKN3-210ENST00000556305 FCGBPQ9Y6R7 5405 aaPredicted RBP1.25□□□□□ -2.21
CDKN3-210ENST00000556305 ZNF736B4DX44 427 aaPredicted RBP1.25□□□□□ -2.21
CDKN3-210ENST00000556305 BANF1O75531 89 aa1.25□□□□□ -2.21
CDKN3-210ENST00000556305 APOA2P02652 100 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms