RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ERCC8Q13216 396 aa13□□□□□ -0.33
CDKN3-209ENST00000556102 PDE6HQ13956 83 aa13□□□□□ -0.33
CDKN3-209ENST00000556102 STX12Q86Y82 276 aa13□□□□□ -0.33
CDKN3-209ENST00000556102 TMEM252Q8N6L7 170 aa13□□□□□ -0.33
CDKN3-209ENST00000556102 LINC00467Q9BRT7 94 aa13□□□□□ -0.33
CDKN3-209ENST00000556102 TRGV2A0A075B6R0 118 aa12.99□□□□□ -0.33
CDKN3-209ENST00000556102 NDUFB4O95168 129 aa12.99□□□□□ -0.33
CDKN3-209ENST00000556102 FGF7P21781 194 aa12.99□□□□□ -0.33
CDKN3-209ENST00000556102 ATP6V1FQ16864 119 aa12.99□□□□□ -0.33
CDKN3-209ENST00000556102 EIF4E3Q8N5X7 224 aaKnown RBP12.99□□□□□ -0.33
CDKN3-209ENST00000556102 C11orf72Q8NBR9 251 aa12.99□□□□□ -0.33
CDKN3-209ENST00000556102 VSIG2Q96IQ7 327 aa12.99□□□□□ -0.33
CDKN3-209ENST00000556102 FAM19A4Q96LR4 140 aa12.99□□□□□ -0.33
CDKN3-209ENST00000556102 LINC00477Q96M19 166 aa12.99□□□□□ -0.33
CDKN3-209ENST00000556102 GSN-AS1Q9NRJ2 163 aa12.99□□□□□ -0.33
CDKN3-209ENST00000556102 TIMM9Q9Y5J7 89 aa12.99□□□□□ -0.33
CDKN3-209ENST00000556102 A0A096LPF7 62 aa12.98□□□□□ -0.33
CDKN3-209ENST00000556102 ZNF324O75467 553 aaPredicted RBP12.98□□□□□ -0.33
CDKN3-209ENST00000556102 IL15RAQ13261 267 aa12.98□□□□□ -0.33
CDKN3-209ENST00000556102 BTN1A1Q13410 526 aa12.98□□□□□ -0.33
CDKN3-209ENST00000556102 RAB32Q13637 225 aa12.98□□□□□ -0.33
CDKN3-209ENST00000556102 ANXA2RQ3ZCQ2 193 aa12.98□□□□□ -0.33
CDKN3-209ENST00000556102 AGPAT4-IT1Q9H0P7 198 aa12.98□□□□□ -0.33
CDKN3-209ENST00000556102 TRGV1A0A0A0MS02 117 aa12.97□□□□□ -0.33
CDKN3-209ENST00000556102 MPDU1O75352 247 aa12.97□□□□□ -0.33
CDKN3-209ENST00000556102 PYYP10082 97 aa12.97□□□□□ -0.33
CDKN3-209ENST00000556102 CD300CQ08708 224 aa12.97□□□□□ -0.33
CDKN3-209ENST00000556102 AAMDCQ9H7C9 122 aa12.97□□□□□ -0.33
CDKN3-209ENST00000556102 FUT9Q9Y231 359 aa12.97□□□□□ -0.33
CDKN3-209ENST00000556102 H2AFB2P0C5Z0 115 aa12.96□□□□□ -0.33
CDKN3-209ENST00000556102 CRISP2P16562 243 aa12.96□□□□□ -0.33
CDKN3-209ENST00000556102 RNASE4P34096 147 aaKnown RBP12.96□□□□□ -0.33
CDKN3-209ENST00000556102 C9orf47Q6ZRZ4 202 aa12.96□□□□□ -0.33
CDKN3-209ENST00000556102 EXOC3-AS1Q8N2X6 119 aa12.96□□□□□ -0.33
CDKN3-209ENST00000556102 BLNKQ8WV28 456 aa12.96□□□□□ -0.33
CDKN3-209ENST00000556102 GPN1Q9HCN4 374 aaPredicted RBP12.96□□□□□ -0.33
CDKN3-209ENST00000556102 SPINK4O60575 86 aa12.95□□□□□ -0.34
CDKN3-209ENST00000556102 GPX1P07203 203 aa12.95□□□□□ -0.34
CDKN3-209ENST00000556102 NMBP08949 121 aa12.95□□□□□ -0.34
CDKN3-209ENST00000556102 TCL1AP56279 114 aa12.95□□□□□ -0.34
CDKN3-209ENST00000556102 KRTAP10-2P60368 255 aa12.95□□□□□ -0.34
CDKN3-209ENST00000556102 GCSAMLQ5JQS6 135 aa12.95□□□□□ -0.34
CDKN3-209ENST00000556102 NPCDR1Q9BY65 106 aa12.95□□□□□ -0.34
CDKN3-209ENST00000556102 KLF12Q9Y4X4 402 aa12.95□□□□□ -0.34
CDKN3-209ENST00000556102 ICAM4Q14773 271 aa12.94□□□□□ -0.34
CDKN3-209ENST00000556102 IBA57Q5T440 356 aaKnown RBP12.94□□□□□ -0.34
CDKN3-209ENST00000556102 TMEM78Q5T7P6 136 aa12.94□□□□□ -0.34
CDKN3-209ENST00000556102 Q8N1X5 172 aa12.94□□□□□ -0.34
CDKN3-209ENST00000556102 CCDC32Q9BV29 185 aa12.94□□□□□ -0.34
CDKN3-209ENST00000556102 SLC25A2Q9BXI2 301 aa12.94□□□□□ -0.34
CDKN3-209ENST00000556102 IGKV2-40A0A087WW87 121 aaPredicted RBP12.93□□□□□ -0.34
CDKN3-209ENST00000556102 IGKV2D-40P01614 121 aaPredicted RBP12.93□□□□□ -0.34
CDKN3-209ENST00000556102 LINC00315P59091 139 aa12.93□□□□□ -0.34
CDKN3-209ENST00000556102 ZFAND2AQ8N6M9 145 aa12.93□□□□□ -0.34
CDKN3-209ENST00000556102 ST6GAL2Q96JF0 529 aa12.93□□□□□ -0.34
CDKN3-209ENST00000556102 FAM167A-AS1Q96KT0 104 aa12.93□□□□□ -0.34
CDKN3-209ENST00000556102 FAM240BA0A1B0GVZ2 78 aa12.92□□□□□ -0.34
CDKN3-209ENST00000556102 RGS13O14921 159 aa12.92□□□□□ -0.34
CDKN3-209ENST00000556102 SIVA1O15304 175 aa12.92□□□□□ -0.34
CDKN3-209ENST00000556102 PRR9Q5T870 116 aa12.92□□□□□ -0.34
CDKN3-209ENST00000556102 FAM122CQ6P4D5 195 aa12.92□□□□□ -0.34
CDKN3-209ENST00000556102 MIR17HGQ75NE6 70 aa12.92□□□□□ -0.34
CDKN3-209ENST00000556102 VGLL1Q99990 258 aa12.92□□□□□ -0.34
CDKN3-209ENST00000556102 ZNF492Q9P255 531 aa12.92□□□□□ -0.34
CDKN3-209ENST00000556102 ICOSQ9Y6W8 199 aa12.92□□□□□ -0.34
CDKN3-209ENST00000556102 IGHV1OR15-1A0A075B7D0 117 aa12.91□□□□□ -0.34
CDKN3-209ENST00000556102 PAX4O43316 350 aa12.91□□□□□ -0.34
CDKN3-209ENST00000556102 NBEAP1P0C6P0 100 aa12.91□□□□□ -0.34
CDKN3-209ENST00000556102 NHLH2Q02577 135 aa12.91□□□□□ -0.34
CDKN3-209ENST00000556102 Q6ZRN7 208 aaPredicted RBP12.91□□□□□ -0.34
CDKN3-209ENST00000556102 OR5C1Q8NGR4 320 aa12.91□□□□□ -0.34
CDKN3-209ENST00000556102 THAP6Q8TBB0 222 aa12.91□□□□□ -0.34
CDKN3-209ENST00000556102 OR51M1Q9H341 326 aa12.91□□□□□ -0.34
CDKN3-209ENST00000556102 TP53TG3Q9ULZ0 132 aa12.91□□□□□ -0.34
CDKN3-209ENST00000556102 ARPC5LQ9BPX5 153 aa12.9□□□□□ -0.34
CDKN3-209ENST00000556102 SCRT2Q9NQ03 307 aa12.9□□□□□ -0.34
CDKN3-209ENST00000556102 MRPL16Q9NX20 251 aaKnown RBP12.9□□□□□ -0.34
CDKN3-209ENST00000556102 NDUFA13Q9P0J0 144 aa12.9□□□□□ -0.34
CDKN3-209ENST00000556102 PRO0255Q9UI72 69 aa12.9□□□□□ -0.34
CDKN3-209ENST00000556102 TRBV7-9A0A0J9YWB2 115 aa12.89□□□□□ -0.35
CDKN3-209ENST00000556102 NXPH4O95158 308 aa12.89□□□□□ -0.35
CDKN3-209ENST00000556102 IGHV3-53P01767 116 aa12.89□□□□□ -0.35
CDKN3-209ENST00000556102 ZNF138P52744 262 aa12.89□□□□□ -0.35
CDKN3-209ENST00000556102 SLAQ13239 276 aa12.89□□□□□ -0.35
CDKN3-209ENST00000556102 MZT2BQ6NZ67 158 aa12.89□□□□□ -0.35
CDKN3-209ENST00000556102 Q6ZQT7 251 aa12.89□□□□□ -0.35
CDKN3-209ENST00000556102 MRPL32Q9BYC8 188 aaKnown RBP12.89□□□□□ -0.35
CDKN3-209ENST00000556102 SLC25A31Q9H0C2 315 aa12.89□□□□□ -0.35
CDKN3-209ENST00000556102 KCNIP2Q9NS61 270 aa12.89□□□□□ -0.35
CDKN3-209ENST00000556102 E5RGE8 158 aa12.88□□□□□ -0.35
CDKN3-209ENST00000556102 ZNF415Q09FC8 603 aa12.88□□□□□ -0.35
CDKN3-209ENST00000556102 FXYD5Q96DB9 178 aa12.88□□□□□ -0.35
CDKN3-209ENST00000556102 PAXXQ9BUH6 204 aa12.88□□□□□ -0.35
CDKN3-209ENST00000556102 OR10J4P0C629 311 aa12.87□□□□□ -0.35
CDKN3-209ENST00000556102 CRYBA4P53673 196 aa12.87□□□□□ -0.35
CDKN3-209ENST00000556102 Q8TAT8 98 aa12.87□□□□□ -0.35
CDKN3-209ENST00000556102 PHYHIPLQ96FC7 376 aa12.87□□□□□ -0.35
CDKN3-209ENST00000556102 WDR61Q9GZS3 305 aaKnown RBP12.87□□□□□ -0.35
CDKN3-209ENST00000556102 HHLA3Q9XRX5 114 aa12.87□□□□□ -0.35
CDKN3-209ENST00000556102 SIX6O95475 246 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms