RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	TMEM75	Q8N9X5	138 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	ZNF738	Q8NE65	137 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	OR10G8	Q8NGN5	311 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	OR9G4	Q8NGQ1	327 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	OR10J6P	Q8NGY7	276 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	OCC1	Q8TAD7	63 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	C2CD4C	Q8TF44	421 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	GLMP	Q8WWB7	406 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	MRPL53	Q96EL3	112 aa	Known RBP	4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	BTF3L4	Q96K17	158 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	C17orf77	Q96MU5	243 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	CITED2	Q99967	270 aa	Predicted RBP	4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	DERL1	Q9BUN8	251 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	TMEM242	Q9NWH2	141 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	PPP1R14D	Q9NXH3	145 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	MLX	Q9UH92	298 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	ZFP30	Q9Y2G7	519 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	SMAD5-AS1	Q9Y6J3	95 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	TLN2	Q9Y4G6	2542 aa		4.22	□□□□□ -1.73
ATL1-208	ENST00000556067	ACAN	P16112	2415 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	ZAN	Q9Y493	2812 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	TRAV34	A0A0B4J273	112 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	TRBV6-1	A0A0K0K1D8	114 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	GAGE12B	A1L429	117 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	TMEM213	A2RRL7	107 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	RBAKDN	A6NC62	111 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	GAGE12H	A6NDE8	117 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	SLC17A3	O00476	420 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	GATC	O43716	136 aa	Known RBP	4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	PROK1	P58294	105 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	BEAN1	Q3B7T3	259 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	RNF212	Q495C1	297 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	IBA57	Q5T440	356 aa	Known RBP	4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	ATRAID	Q6UW56	229 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	NDUFA11	Q86Y39	141 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	GBGT1	Q8N5D6	347 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	SFRP2	Q96HF1	295 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	TUBA4B	Q9H853	241 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	PSG8	Q9UQ74	426 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	KLF12	Q9Y4X4	402 aa		4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	SON	P18583	2426 aa	Known RBP	4.21	□□□□□ -1.74
ATL1-208	ENST00000556067	NBPF19	A0A087WUL8	3843 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	FLNB	O75369	2602 aa	Known RBP	4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	TRAV25	A0A0B4J276	109 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	PGPEP1L	A6NFU8	196 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	OR4C46	A6NHA9	309 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.2	□□□□□ -1.74
ATL1-208	ENST00000556067		M0R3E3	92 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	GCG	P01275	180 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	LTA	P01374	205 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067		P01737	135 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	TFPI2	P48307	235 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	CMC4	P56277	68 aa	Predicted RBP	4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	PRR27	Q6MZM9	219 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	EBLN2	Q6P2I7	272 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	TMEM88	Q6PEY1	159 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	C18orf65	Q6ZTR6	163 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067		Q86TA4	180 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	CBLN2	Q8IUK8	224 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	TMEM183A	Q8IXX5	376 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	RNF182	Q8N6D2	247 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	NHLRC2	Q8NBF2	726 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	WIPF2	Q8TF74	440 aa	Predicted RBP	4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	DLX4	Q92988	240 aa	Predicted RBP	4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	ISOC2	Q96AB3	205 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	SGK494	Q96LW2	274 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	IGF2BP2-AS1	Q96M15	143 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	LINC00477	Q96M19	166 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	LINC00479	Q96M42	142 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	DUX3	Q96PT4	197 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	IMMP2L	Q96T52	175 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	MS4A6A	Q9H2W1	248 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	OSTC	Q9NRP0	149 aa		4.2	□□□□□ -1.74
ATL1-208	ENST00000556067	CSMD2	Q7Z408	3487 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	VPS13C	Q709C8	3753 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	TRBV20OR9-2	A0A075B6H5	130 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	TRAV2	A0A0B4J234	112 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	TRAV8-2	A0A0B4J237	113 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	XKRY2	A2RUG3	117 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	SAP30	O75446	220 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	DUSP14	O95147	198 aa	Known RBP	4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	IGKV2D-40	P01614	121 aa	Predicted RBP	4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	HLA-DMB	P28068	263 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	ZNF138	P52744	262 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	HIST1H1A	Q02539	215 aa	Predicted RBP	4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	OR5I1	Q13606	314 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	FHL3	Q13643	280 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	ODF1	Q14990	250 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	SMUG1	Q53HV7	270 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	FAM231D	Q6ZW35	169 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	BORCS7	Q96B45	105 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	ASCL2	Q99929	193 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	ZNF492	Q9P255	531 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	C11orf21	Q9P2W6	132 aa		4.19	□□□□□ -1.74
ATL1-208	ENST00000556067	TRAV9-1	A0A075B6T8	112 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms