RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 APLNQ9ULZ1 77 aa4.83□□□□□ -1.64
PSEN1-216ENST00000556066 CELA1Q9UNI1 258 aa4.83□□□□□ -1.64
PSEN1-216ENST00000556066 IGHV4-4A0A075B6R2 117 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 IGKV1D-37A0A075B6S9 117 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 DEFB131BA0A096LNP1 70 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 PIGBOS1A0A0B4J2F0 54 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 A0A1W2PPV4 95 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 TMEM218A2RU14 115 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 AGPAT2O15120 278 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 APOC3P02656 99 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 HLA-DRB4P13762 266 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 BTN1A1Q13410 526 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 C12orf74Q32Q52 190 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 OR8G2PQ6IF36 304 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 UQCC3Q6UW78 93 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 OR8I2Q8N0Y5 310 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.82□□□□□ -1.64
PSEN1-216ENST00000556066 OR4C5Q8NGB2 326 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 SLC25A22Q9H936 323 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 HLA-DRB4X5D2U9 266 aa4.82□□□□□ -1.64
PSEN1-216ENST00000556066 C9JQL5 133 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 MBP02144 154 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 METTL15P1P0C7V9 234 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 GYPEP15421 78 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 ADCYAP1P18509 176 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 PSMB3P49720 205 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 SULT1A1P50225 295 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 PTTG1IPP53801 180 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 BAXQ07812 192 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 RNF151Q2KHN1 245 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 SPANXN5Q5MJ07 72 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 C10orf91Q5T1B1 145 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 EBLN2Q6P2I7 272 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 FOXI2Q6ZQN5 318 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 SYT8Q8NBV8 401 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 OR2G3Q8NGZ4 309 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 LYPD6BQ8NI32 183 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 FAM213BQ8TBF2 198 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 CIB3Q96Q77 187 aaPredicted RBP4.81□□□□□ -1.64
PSEN1-216ENST00000556066 TRGV9Q99603 122 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 ATP5SQ99766 215 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 SCRT1Q9BWW7 348 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 SAV1Q9H4B6 383 aaPredicted RBP4.81□□□□□ -1.64
PSEN1-216ENST00000556066 GEMIN7Q9H840 131 aaKnown RBP4.81□□□□□ -1.64
PSEN1-216ENST00000556066 SLC45A2Q9UMX9 530 aa4.81□□□□□ -1.64
PSEN1-216ENST00000556066 PKHD1P08F94 4074 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 IGKV1OR2-108A0A075B7D4 117 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 A0A1B0GV50 99 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 SMCO3A2RU48 225 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 PMS2P5A8MQ11 134 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 F6UB75 175 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 F8W036 122 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 IFNA5P01569 189 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 SPART-AS1P0CW21 52 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 ORM2P19652 201 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 M6PRP20645 277 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 GATA2P23769 480 aaPredicted RBP4.8□□□□□ -1.64
PSEN1-216ENST00000556066 GALR1P47211 349 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 PPT1P50897 306 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 TAS2R30P59541 319 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 ZNF266Q14584 549 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 C1orf194Q5T5A4 169 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 FAM78BQ5VT40 261 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 TMEM14EPQ6UXP3 125 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 THAP8Q8NA92 274 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 OR1B1Q8NGR6 318 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 RSG1Q9BU20 258 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 NDUFAF3Q9BU61 184 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 SLC35B3Q9H1N7 401 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 UQCC1Q9NVA1 299 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 RNF24Q9Y225 148 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 VPS13DQ5THJ4 4388 aa4.8□□□□□ -1.64
PSEN1-216ENST00000556066 TMEM189A5PLL7 270 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 SMIM9A6NGZ8 99 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 ZNF98A6NK75 572 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 FAM74A7A6NL05 159 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 ZNF705FA8MVS1 300 aaPredicted RBP4.79□□□□□ -1.64
PSEN1-216ENST00000556066 ISLRO14498 428 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 SOCS3O14543 225 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 AMBPP02760 352 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 SFTA3P0C7M3 94 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 ZNF705DP0CH99 300 aaPredicted RBP4.79□□□□□ -1.64
PSEN1-216ENST00000556066 ZNF705BP0CI00 300 aaPredicted RBP4.79□□□□□ -1.64
PSEN1-216ENST00000556066 HTN3P15516 51 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 MEOX2P50222 304 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 RAB5CP51148 216 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 CCL20P78556 96 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 PSG9Q00887 426 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 SLC38A11Q08AI6 406 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 GUK1Q16774 197 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 GAGE13Q4V321 117 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 FAM74A3Q4VXF1 159 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 ZNF705AQ6ZN79 300 aaPredicted RBP4.79□□□□□ -1.64
PSEN1-216ENST00000556066 ZNF709Q8N972 641 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 SCGB1C1Q8TD33 95 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 GNPNAT1Q96EK6 184 aaPredicted RBP4.79□□□□□ -1.64
PSEN1-216ENST00000556066 ATG101Q9BSB4 218 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 TMEM208Q9BTX3 173 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 TMEM147Q9BVK8 224 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 SEC11CQ9BY50 192 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms