RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PRSS22Q9GZN4 317 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 Q9H3A6 140 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 OTORQ9NRC9 128 aa5.25□□□□□ -1.57
SLIRP-204ENST00000555890 K7EQM0 130 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 NPSP0C0P6 89 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 RPS10P46783 165 aaKnown RBP5.24□□□□□ -1.57
SLIRP-204ENST00000555890 HILS1P60008 231 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 BLCAPP62952 87 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 PSG9Q00887 426 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 PDE6HQ13956 83 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 TMEM183BQ1AE95 376 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 CENPWQ5EE01 88 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 TOMM20LQ6UXN7 152 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 OR8I2Q8N0Y5 310 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 SFRP2Q96HF1 295 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 FAM210BQ96KR6 192 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 GPR82Q96P67 336 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 ATG101Q9BSB4 218 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 AAMDCQ9H7C9 122 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 ESM1Q9NQ30 184 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 BIN3Q9NQY0 253 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 AURKAIP1Q9NWT8 199 aaPredicted RBP5.24□□□□□ -1.57
SLIRP-204ENST00000555890 ZNF586Q9NXT0 402 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 LINC00527Q9UJ94 153 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 VPREB3Q9UKI3 123 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 URGCP-MRPS24S4R325 110 aa5.24□□□□□ -1.57
SLIRP-204ENST00000555890 TRBV20OR9-2A0A075B6H5 130 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 TRBV19A0A075B6N1 114 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 TRBV24-1A0A075B6N3 115 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 TGIF2-C20orf24A0A0A6YYL0 155 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 M0QZ24 198 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 GCGP01275 180 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 TCRAP04437 139 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 PFN1P07737 140 aaKnown RBP5.23□□□□□ -1.57
SLIRP-204ENST00000555890 SNRPCP09234 159 aaKnown RBP5.23□□□□□ -1.57
SLIRP-204ENST00000555890 IGLC2P0DOY2 106 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 MGST1P10620 155 aaKnown RBP5.23□□□□□ -1.57
SLIRP-204ENST00000555890 CSN1S1P47710 185 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 CAMPP49913 170 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 ERVFC1-1P60608 527 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 SLC35B1P78383 322 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 RPL19P84098 196 aaKnown RBP5.23□□□□□ -1.57
SLIRP-204ENST00000555890 C1orf194Q5T5A4 169 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 TEX38Q6PEX7 206 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 BAGE2Q86Y30 109 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 MUC7Q8TAX7 377 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 SMIM12Q96EX1 92 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 FMC1Q96HJ9 113 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 ZNF414Q96IQ9 312 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 NOL4LQ96MY1 436 aaPredicted RBP5.23□□□□□ -1.57
SLIRP-204ENST00000555890 METTL26Q96S19 204 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 NPFFR1Q9GZQ6 430 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 SERTAD4Q9NUC0 356 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 RPH3ALQ9UNE2 315 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 KLF12Q9Y4X4 402 aa5.23□□□□□ -1.57
SLIRP-204ENST00000555890 TRAV9-1A0A075B6T8 112 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.22□□□□□ -1.57
SLIRP-204ENST00000555890 LOC105371267A0A1B0GV96 52 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 SERTM2A0A1B0GWG4 89 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 PPP5D1E7EU14 171 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 H3BTX0 84 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 ISLRO14498 428 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 MRPS12O15235 138 aaKnown RBP5.22□□□□□ -1.57
SLIRP-204ENST00000555890 IGHG4P01861 327 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 S100A6P06703 90 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 CXCL1P09341 107 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 MEOX2P50222 304 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 GNG5P63218 68 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 SCGB2A2Q13296 93 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 RPEL1Q2QD12 228 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 TMEM86BQ8N661 226 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 ARL6IP6Q8N6S5 226 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 SYT8Q8NBV8 401 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 OR4X2Q8NGF9 303 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 GRAMD2BQ96HH9 432 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 IGF2BP2-AS1Q96M15 143 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 PYGO2Q9BRQ0 406 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 OSTCQ9NRP0 149 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 IL36BQ9NZH7 164 aa5.22□□□□□ -1.57
SLIRP-204ENST00000555890 SRRM2Q9UQ35 2752 aaKnown RBP5.22□□□□□ -1.57
SLIRP-204ENST00000555890 TRAV34A0A0B4J273 112 aa5.21□□□□□ -1.58
SLIRP-204ENST00000555890 IGHV3-35A0A0C4DH35 117 aa5.21□□□□□ -1.58
SLIRP-204ENST00000555890 TRBV6-1A0A0K0K1D8 114 aa5.21□□□□□ -1.58
SLIRP-204ENST00000555890 A0A1W2PPQ1 181 aa5.21□□□□□ -1.58
SLIRP-204ENST00000555890 FBLL1A6NHQ2 334 aaKnown RBP5.21□□□□□ -1.58
SLIRP-204ENST00000555890 K7EN84 100 aa5.21□□□□□ -1.58
SLIRP-204ENST00000555890 NDUFA4O00483 81 aa5.21□□□□□ -1.58
SLIRP-204ENST00000555890 GGCTO75223 188 aaKnown RBP5.21□□□□□ -1.58
SLIRP-204ENST00000555890 ZNF253O75346 499 aa5.21□□□□□ -1.58
SLIRP-204ENST00000555890 OR5I1Q13606 314 aa5.21□□□□□ -1.58
SLIRP-204ENST00000555890 IBA57Q5T440 356 aaKnown RBP5.21□□□□□ -1.58
SLIRP-204ENST00000555890 SIGLEC15Q6ZMC9 328 aa5.21□□□□□ -1.58
SLIRP-204ENST00000555890 FAM231DQ6ZW35 169 aa5.21□□□□□ -1.58
SLIRP-204ENST00000555890 EXOC3-AS1Q8N2X6 119 aa5.21□□□□□ -1.58
SLIRP-204ENST00000555890 SIGLECL1Q8N7X8 197 aa5.21□□□□□ -1.58
SLIRP-204ENST00000555890 ZNF418Q8TF45 676 aaPredicted RBP5.21□□□□□ -1.58
SLIRP-204ENST00000555890 LINC00479Q96M42 142 aa5.21□□□□□ -1.58
SLIRP-204ENST00000555890 SRD5A3Q9H8P0 318 aa5.21□□□□□ -1.58
SLIRP-204ENST00000555890 IGHV3OR16-8A0A075B7F1 116 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 A0A087X0K7 114 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms