RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 PRR9Q5T870 116 aa9.69□□□□□ -0.86
SNX6-203ENST00000555416 RPL7L1Q6DKI1 246 aaKnown RBP9.69□□□□□ -0.86
SNX6-203ENST00000555416 LGALS9CQ6DKI2 356 aa9.69□□□□□ -0.86
SNX6-203ENST00000555416 C9orf47Q6ZRZ4 202 aa9.69□□□□□ -0.86
SNX6-203ENST00000555416 TMEM256Q8N2U0 113 aa9.69□□□□□ -0.86
SNX6-203ENST00000555416 OR10G4Q8NGN3 311 aa9.69□□□□□ -0.86
SNX6-203ENST00000555416 OR10G9Q8NGN4 311 aa9.69□□□□□ -0.86
SNX6-203ENST00000555416 OR10G7Q8NGN6 311 aa9.69□□□□□ -0.86
SNX6-203ENST00000555416 RNASE8Q8TDE3 154 aaKnown RBP9.69□□□□□ -0.86
SNX6-203ENST00000555416 KLLNB2CW77 178 aa9.68□□□□□ -0.86
SNX6-203ENST00000555416 H7BYZ3 331 aa9.68□□□□□ -0.86
SNX6-203ENST00000555416 HTN3P15516 51 aa9.68□□□□□ -0.86
SNX6-203ENST00000555416 DAD1P61803 113 aa9.68□□□□□ -0.86
SNX6-203ENST00000555416 BTN1A1Q13410 526 aa9.68□□□□□ -0.86
SNX6-203ENST00000555416 ZNF266Q14584 549 aa9.68□□□□□ -0.86
SNX6-203ENST00000555416 ZFAND2AQ8N6M9 145 aa9.68□□□□□ -0.86
SNX6-203ENST00000555416 OR2G3Q8NGZ4 309 aa9.68□□□□□ -0.86
SNX6-203ENST00000555416 Q8TAT8 98 aa9.68□□□□□ -0.86
SNX6-203ENST00000555416 LINC00477Q96M19 166 aa9.68□□□□□ -0.86
SNX6-203ENST00000555416 TEX48A0A1B0GUV7 120 aa9.67□□□□□ -0.86
SNX6-203ENST00000555416 C7orf71A4D174 169 aa9.67□□□□□ -0.86
SNX6-203ENST00000555416 ZNF324O75467 553 aaPredicted RBP9.67□□□□□ -0.86
SNX6-203ENST00000555416 DEFB130BP0DP73 79 aa9.67□□□□□ -0.86
SNX6-203ENST00000555416 DEFB130AP0DP74 79 aa9.67□□□□□ -0.86
SNX6-203ENST00000555416 TAS2R45P59539 299 aa9.67□□□□□ -0.86
SNX6-203ENST00000555416 SSX7Q7RTT5 188 aa9.67□□□□□ -0.86
SNX6-203ENST00000555416 INO80EQ8NBZ0 244 aaPredicted RBP9.67□□□□□ -0.86
SNX6-203ENST00000555416 C20orf144Q9BQM9 153 aa9.67□□□□□ -0.86
SNX6-203ENST00000555416 PSMG3Q9BT73 122 aaPredicted RBP9.67□□□□□ -0.86
SNX6-203ENST00000555416 ZNF492Q9P255 531 aa9.67□□□□□ -0.86
SNX6-203ENST00000555416 VPS13DQ5THJ4 4388 aa9.67□□□□□ -0.86
SNX6-203ENST00000555416 A0A1W2PPV4 95 aa9.66□□□□□ -0.86
SNX6-203ENST00000555416 LYRM9A8MSI8 78 aa9.66□□□□□ -0.86
SNX6-203ENST00000555416 ARL14EPLP0DKL9 152 aa9.66□□□□□ -0.86
SNX6-203ENST00000555416 CRISP2P16562 243 aa9.66□□□□□ -0.86
SNX6-203ENST00000555416 RNASE4P34096 147 aaKnown RBP9.66□□□□□ -0.86
SNX6-203ENST00000555416 TCTAP57738 103 aa9.66□□□□□ -0.86
SNX6-203ENST00000555416 LYPD1Q8N2G4 141 aa9.66□□□□□ -0.86
SNX6-203ENST00000555416 RAB24Q969Q5 203 aa9.66□□□□□ -0.86
SNX6-203ENST00000555416 HYLS1Q96M11 299 aa9.66□□□□□ -0.86
SNX6-203ENST00000555416 NOP10Q9NPE3 64 aaKnown RBP9.66□□□□□ -0.86
SNX6-203ENST00000555416 CYTL1Q9NRR1 136 aa9.66□□□□□ -0.86
SNX6-203ENST00000555416 PGPA6NDG6 321 aa9.65□□□□□ -0.86
SNX6-203ENST00000555416 DIRC3C9JPN6 131 aa9.65□□□□□ -0.86
SNX6-203ENST00000555416 ARPC5O15511 151 aa9.65□□□□□ -0.86
SNX6-203ENST00000555416 SLC25A5P05141 298 aaKnown RBP9.65□□□□□ -0.86
SNX6-203ENST00000555416 CDC34P49427 236 aaPredicted RBP9.65□□□□□ -0.86
SNX6-203ENST00000555416 PQLC2Q6ZP29 291 aa9.65□□□□□ -0.86
SNX6-203ENST00000555416 OR11H4Q8NGC9 324 aa9.65□□□□□ -0.86
SNX6-203ENST00000555416 TMEM263Q8WUH6 116 aaKnown RBP9.65□□□□□ -0.86
SNX6-203ENST00000555416 C16orf74Q96GX8 76 aa9.65□□□□□ -0.86
SNX6-203ENST00000555416 EPPK1P58107 5090 aaKnown RBP9.65□□□□□ -0.86
SNX6-203ENST00000555416 STAG3L2P0CL84 134 aa9.64□□□□□ -0.87
SNX6-203ENST00000555416 STAG3L3P0CL85 134 aa9.64□□□□□ -0.87
SNX6-203ENST00000555416 ZNF138P52744 262 aa9.64□□□□□ -0.87
SNX6-203ENST00000555416 GNG5P63218 68 aa9.64□□□□□ -0.87
SNX6-203ENST00000555416 ZNF726P1Q15940 193 aa9.64□□□□□ -0.87
SNX6-203ENST00000555416 TMEM78Q5T7P6 136 aa9.64□□□□□ -0.87
SNX6-203ENST00000555416 ZNF493Q6ZR52 646 aa9.64□□□□□ -0.87
SNX6-203ENST00000555416 NDUFAF3Q9BU61 184 aa9.64□□□□□ -0.87
SNX6-203ENST00000555416 OTORQ9NRC9 128 aa9.64□□□□□ -0.87
SNX6-203ENST00000555416 TIMM8BQ9Y5J9 83 aaPredicted RBP9.64□□□□□ -0.87
SNX6-203ENST00000555416 RBAKDNA6NC62 111 aa9.63□□□□□ -0.87
SNX6-203ENST00000555416 GPX1P07203 203 aa9.63□□□□□ -0.87
SNX6-203ENST00000555416 GCHFRP30047 84 aa9.63□□□□□ -0.87
SNX6-203ENST00000555416 CSN1S1P47710 185 aa9.63□□□□□ -0.87
SNX6-203ENST00000555416 SERF2P84101 59 aa9.63□□□□□ -0.87
SNX6-203ENST00000555416 TMEM88Q6PEY1 159 aa9.63□□□□□ -0.87
SNX6-203ENST00000555416 C11orf72Q8NBR9 251 aa9.63□□□□□ -0.87
SNX6-203ENST00000555416 SUN5Q8TC36 379 aa9.63□□□□□ -0.87
SNX6-203ENST00000555416 PYGO2Q9BRQ0 406 aa9.63□□□□□ -0.87
SNX6-203ENST00000555416 TP53TG3Q9ULZ0 132 aa9.63□□□□□ -0.87
SNX6-203ENST00000555416 RPH3ALQ9UNE2 315 aa9.63□□□□□ -0.87
SNX6-203ENST00000555416 TRAV8-1A0A0A6YYK1 113 aa9.62□□□□□ -0.87
SNX6-203ENST00000555416 BORCS7-ASMTA0A0B4J1R7 106 aa9.62□□□□□ -0.87
SNX6-203ENST00000555416 GOLT1AQ6ZVE7 132 aa9.62□□□□□ -0.87
SNX6-203ENST00000555416 CCDC28AQ8IWP9 274 aa9.62□□□□□ -0.87
SNX6-203ENST00000555416 LINC00612Q8N6U2 182 aa9.62□□□□□ -0.87
SNX6-203ENST00000555416 GNPNAT1Q96EK6 184 aaPredicted RBP9.62□□□□□ -0.87
SNX6-203ENST00000555416 TVP23CQ96ET8 276 aa9.62□□□□□ -0.87
SNX6-203ENST00000555416 GSN-AS1Q9NRJ2 163 aa9.62□□□□□ -0.87
SNX6-203ENST00000555416 CBY3A6NI87 242 aa9.61□□□□□ -0.87
SNX6-203ENST00000555416 NMBP08949 121 aa9.61□□□□□ -0.87
SNX6-203ENST00000555416 RXFP4Q8TDU9 374 aa9.61□□□□□ -0.87
SNX6-203ENST00000555416 LINC00467Q9BRT7 94 aa9.61□□□□□ -0.87
SNX6-203ENST00000555416 KLF12Q9Y4X4 402 aa9.61□□□□□ -0.87
SNX6-203ENST00000555416 GAGE12BA1L429 117 aa9.6□□□□□ -0.87
SNX6-203ENST00000555416 GGTLC3B5MD39 225 aa9.6□□□□□ -0.87
SNX6-203ENST00000555416 F5H768 121 aa9.6□□□□□ -0.87
SNX6-203ENST00000555416 GAGE7O76087 117 aa9.6□□□□□ -0.87
SNX6-203ENST00000555416 MBP02144 154 aa9.6□□□□□ -0.87
SNX6-203ENST00000555416 GAGE12FP0CL80 117 aa9.6□□□□□ -0.87
SNX6-203ENST00000555416 GAGE12GP0CL81 117 aa9.6□□□□□ -0.87
SNX6-203ENST00000555416 GAGE12IP0CL82 117 aa9.6□□□□□ -0.87
SNX6-203ENST00000555416 Q6ZTI0 123 aa9.6□□□□□ -0.87
SNX6-203ENST00000555416 KCNRGQ8N5I3 272 aa9.6□□□□□ -0.87
SNX6-203ENST00000555416 FAM210BQ96KR6 192 aa9.6□□□□□ -0.87
SNX6-203ENST00000555416 SGK494Q96LW2 274 aa9.6□□□□□ -0.87
SNX6-203ENST00000555416 ACTR3CQ9C0K3 210 aaPredicted RBP9.6□□□□□ -0.87
SNX6-203ENST00000555416 TMPRSS5Q9H3S3 457 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms