RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 HBE1P02100 147 aa7.71□□□□□ -1.18
TMEM260-206ENST00000555046 SLC25A5P05141 298 aaKnown RBP7.71□□□□□ -1.18
TMEM260-206ENST00000555046 ZNF705DP0CH99 300 aaPredicted RBP7.71□□□□□ -1.18
TMEM260-206ENST00000555046 ZNF705BP0CI00 300 aaPredicted RBP7.71□□□□□ -1.18
TMEM260-206ENST00000555046 ARL14EPLP0DKL9 152 aa7.71□□□□□ -1.18
TMEM260-206ENST00000555046 GCHFRP30047 84 aa7.71□□□□□ -1.18
TMEM260-206ENST00000555046 DEFB1P60022 68 aa7.71□□□□□ -1.18
TMEM260-206ENST00000555046 AMTNQ6UX39 209 aa7.71□□□□□ -1.18
TMEM260-206ENST00000555046 SLC51BQ86UW2 128 aa7.71□□□□□ -1.18
TMEM260-206ENST00000555046 SUN5Q8TC36 379 aa7.71□□□□□ -1.18
TMEM260-206ENST00000555046 C20orf144Q9BQM9 153 aa7.71□□□□□ -1.18
TMEM260-206ENST00000555046 SLC35B3Q9H1N7 401 aa7.71□□□□□ -1.18
TMEM260-206ENST00000555046 EDA2RQ9HAV5 297 aa7.71□□□□□ -1.18
TMEM260-206ENST00000555046 NPIPB6E9PJ23 425 aa7.7□□□□□ -1.18
TMEM260-206ENST00000555046 TEX46H3BTG2 121 aa7.7□□□□□ -1.18
TMEM260-206ENST00000555046 M0R3E3 92 aa7.7□□□□□ -1.18
TMEM260-206ENST00000555046 HMGB3O15347 200 aaKnown RBP7.7□□□□□ -1.18
TMEM260-206ENST00000555046 FXYD7P58549 80 aa7.7□□□□□ -1.18
TMEM260-206ENST00000555046 SPINK13Q1W4C9 94 aa7.7□□□□□ -1.18
TMEM260-206ENST00000555046 ZNF705AQ6ZN79 300 aaPredicted RBP7.7□□□□□ -1.18
TMEM260-206ENST00000555046 C9orf47Q6ZRZ4 202 aa7.7□□□□□ -1.18
TMEM260-206ENST00000555046 IQCF2Q8IXL9 164 aa7.7□□□□□ -1.18
TMEM260-206ENST00000555046 MUC7Q8TAX7 377 aa7.7□□□□□ -1.18
TMEM260-206ENST00000555046 PHYHIPLQ96FC7 376 aa7.7□□□□□ -1.18
TMEM260-206ENST00000555046 C11orf68Q9H3H3 251 aaKnown RBP7.7□□□□□ -1.18
TMEM260-206ENST00000555046 HERC1Q15751 4861 aa7.7□□□□□ -1.18
TMEM260-206ENST00000555046 PLECQ15149 4684 aaKnown RBP7.69□□□□□ -1.18
TMEM260-206ENST00000555046 HUWE1Q7Z6Z7 4374 aaKnown RBP7.69□□□□□ -1.18
TMEM260-206ENST00000555046 A0A0J9YWU9 116 aa7.69□□□□□ -1.18
TMEM260-206ENST00000555046 A0A1W2PRE2 83 aa7.69□□□□□ -1.18
TMEM260-206ENST00000555046 FBLL1A6NHQ2 334 aaKnown RBP7.69□□□□□ -1.18
TMEM260-206ENST00000555046 PRAC2D3DTV9 90 aa7.69□□□□□ -1.18
TMEM260-206ENST00000555046 PPT1P50897 306 aa7.69□□□□□ -1.18
TMEM260-206ENST00000555046 RRN3P1Q2M238 152 aa7.69□□□□□ -1.18
TMEM260-206ENST00000555046 TMED6Q8WW62 240 aa7.69□□□□□ -1.18
TMEM260-206ENST00000555046 LINC01587Q99440 93 aa7.69□□□□□ -1.18
TMEM260-206ENST00000555046 LENEPQ9Y5L5 61 aa7.69□□□□□ -1.18
TMEM260-206ENST00000555046 IGHV3OR16-12A0A075B7B8 117 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 TEX48A0A1B0GUV7 120 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 MAP1LC3B2A6NCE7 125 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 DIRC3C9JPN6 131 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 F6UZH7 168 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 H7BYZ3 331 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 M0R2Z0 102 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 H2AFB1P0C5Y9 115 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 CT45A10P0DMU9 189 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 ZNF138P52744 262 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 TAS2R60P59551 318 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 SUMO1P63165 101 aaKnown RBP7.68□□□□□ -1.18
TMEM260-206ENST00000555046 LCE2CQ5TA81 110 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 CCDC28AQ8IWP9 274 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 C5orf17Q8NAS9 161 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 SFT2D1Q8WV19 159 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 MBD3L1Q8WWY6 194 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 NIPSNAP3BQ9BS92 247 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 MAP1LC3BQ9GZQ8 125 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 AGPAT4-IT1Q9H0P7 198 aa7.68□□□□□ -1.18
TMEM260-206ENST00000555046 ALMS1Q8TCU4 4167 aa7.67□□□□□ -1.18
TMEM260-206ENST00000555046 CXorf65A6NEN9 183 aa7.67□□□□□ -1.18
TMEM260-206ENST00000555046 GPX1P07203 203 aa7.67□□□□□ -1.18
TMEM260-206ENST00000555046 ZNF493Q6ZR52 646 aa7.67□□□□□ -1.18
TMEM260-206ENST00000555046 C11orf45Q8TAV5 145 aa7.67□□□□□ -1.18
TMEM260-206ENST00000555046 FAM213BQ8TBF2 198 aa7.67□□□□□ -1.18
TMEM260-206ENST00000555046 TCEAL7Q9BRU2 100 aa7.67□□□□□ -1.18
TMEM260-206ENST00000555046 ZNF492Q9P255 531 aa7.67□□□□□ -1.18
TMEM260-206ENST00000555046 ARL2-SNX15V9GYD0 113 aa7.67□□□□□ -1.18
TMEM260-206ENST00000555046 X6R8D5 127 aa7.67□□□□□ -1.18
TMEM260-206ENST00000555046 TRAV12-2A0A075B6T6 113 aa7.66□□□□□ -1.18
TMEM260-206ENST00000555046 IGHV4-28A0A0C4DH34 117 aa7.66□□□□□ -1.18
TMEM260-206ENST00000555046 A0A1B0GVG6 124 aa7.66□□□□□ -1.18
TMEM260-206ENST00000555046 CRXO43186 299 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-206ENST00000555046 IFNA7P01567 189 aa7.66□□□□□ -1.18
TMEM260-206ENST00000555046 SPART-AS1P0CW21 52 aa7.66□□□□□ -1.18
TMEM260-206ENST00000555046 CRISP2P16562 243 aa7.66□□□□□ -1.18
TMEM260-206ENST00000555046 FHITP49789 147 aa7.66□□□□□ -1.18
TMEM260-206ENST00000555046 ERCC8Q13216 396 aa7.66□□□□□ -1.18
TMEM260-206ENST00000555046 ZNF726P1Q15940 193 aa7.66□□□□□ -1.18
TMEM260-206ENST00000555046 C1orf158Q8N1D5 194 aa7.66□□□□□ -1.18
TMEM260-206ENST00000555046 Q8NAQ8 132 aa7.66□□□□□ -1.18
TMEM260-206ENST00000555046 PYGO2Q9BRQ0 406 aa7.66□□□□□ -1.18
TMEM260-206ENST00000555046 NDFIP1Q9BT67 221 aa7.66□□□□□ -1.18
TMEM260-206ENST00000555046 EPDR1Q9UM22 224 aa7.66□□□□□ -1.18
TMEM260-206ENST00000555046 IGKV2-40A0A087WW87 121 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-206ENST00000555046 TRAV1-1A0A0B4J248 108 aa7.65□□□□□ -1.18
TMEM260-206ENST00000555046 C7orf71A4D174 169 aa7.65□□□□□ -1.18
TMEM260-206ENST00000555046 AGRNO00468 2067 aa7.65□□□□□ -1.18
TMEM260-206ENST00000555046 EIF3GO75821 320 aaKnown RBP eCLIP7.65□□□□□ -1.18
TMEM260-206ENST00000555046 IGKV2D-40P01614 121 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-206ENST00000555046 RNASE4P34096 147 aaKnown RBP7.65□□□□□ -1.18
TMEM260-206ENST00000555046 SULT1A2P50226 295 aa7.65□□□□□ -1.18
TMEM260-206ENST00000555046 SAPCD1Q5SSQ6 148 aa7.65□□□□□ -1.18
TMEM260-206ENST00000555046 GOLT1AQ6ZVE7 132 aa7.65□□□□□ -1.18
TMEM260-206ENST00000555046 C9orf62Q8N4C0 152 aa7.65□□□□□ -1.18
TMEM260-206ENST00000555046 HIST1H2BAQ96A08 127 aa7.65□□□□□ -1.18
TMEM260-206ENST00000555046 FAM19A4Q96LR4 140 aa7.65□□□□□ -1.18
TMEM260-206ENST00000555046 VGLL1Q99990 258 aa7.65□□□□□ -1.18
TMEM260-206ENST00000555046 LOC102723971A0A1B0GUV8 181 aa7.64□□□□□ -1.19
TMEM260-206ENST00000555046 KLLNB2CW77 178 aa7.64□□□□□ -1.19
TMEM260-206ENST00000555046 C11orf94C9JXX5 98 aa7.64□□□□□ -1.19
TMEM260-206ENST00000555046 TCRAP04437 139 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms