RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 A8MWL6 223 aa13.16□□□□□ -0.3
PCNX1-209ENST00000554879 K7EMI3 77 aa13.16□□□□□ -0.3
PCNX1-209ENST00000554879 KALRNO60229 2985 aa13.16□□□□□ -0.3
PCNX1-209ENST00000554879 ANKRD17O75179 2603 aaKnown RBP13.16□□□□□ -0.3
PCNX1-209ENST00000554879 C8orf31Q8N9H6 132 aa13.16□□□□□ -0.3
PCNX1-209ENST00000554879 H3BMG7 143 aa13.15□□□□□ -0.3
PCNX1-209ENST00000554879 K7ERJ3 54 aa13.15□□□□□ -0.3
PCNX1-209ENST00000554879 TRGV3P03979 118 aa13.15□□□□□ -0.3
PCNX1-209ENST00000554879 WFDC2Q14508 124 aa13.15□□□□□ -0.3
PCNX1-209ENST00000554879 CLEC19AQ6UXS0 136 aa13.15□□□□□ -0.3
PCNX1-209ENST00000554879 HIST1H4GQ99525 98 aa13.15□□□□□ -0.3
PCNX1-209ENST00000554879 RNF5Q99942 180 aa13.15□□□□□ -0.3
PCNX1-209ENST00000554879 IGSF10Q6WRI0 2623 aa13.15□□□□□ -0.3
PCNX1-209ENST00000554879 TRBV20-1A0A075B6N2 111 aa13.15□□□□□ -0.3
PCNX1-209ENST00000554879 PMS2P5A8MQ11 134 aa13.15□□□□□ -0.3
PCNX1-209ENST00000554879 P01737 135 aa13.15□□□□□ -0.3
PCNX1-209ENST00000554879 RABAC1Q9UI14 185 aa13.15□□□□□ -0.3
PCNX1-209ENST00000554879 SSBP2P81877 361 aaPredicted RBP13.15□□□□□ -0.3
PCNX1-209ENST00000554879 OR11H6Q8NGC7 330 aa13.15□□□□□ -0.3
PCNX1-209ENST00000554879 TRAV9-1A0A075B6T8 112 aa13.14□□□□□ -0.31
PCNX1-209ENST00000554879 A0A1W2PPM0 123 aa13.14□□□□□ -0.31
PCNX1-209ENST00000554879 APOHP02749 345 aaPredicted RBP13.14□□□□□ -0.31
PCNX1-209ENST00000554879 C3orf56Q8N813 242 aa13.14□□□□□ -0.31
PCNX1-209ENST00000554879 ZNF479Q96JC4 524 aa13.14□□□□□ -0.31
PCNX1-209ENST00000554879 OOSP1A8MZH6 123 aa13.14□□□□□ -0.31
PCNX1-209ENST00000554879 TMEM249Q2WGJ8 235 aa13.14□□□□□ -0.31
PCNX1-209ENST00000554879 RNF183Q96D59 192 aa13.14□□□□□ -0.31
PCNX1-209ENST00000554879 RAI1Q7Z5J4 1906 aaPredicted RBP13.14□□□□□ -0.31
PCNX1-209ENST00000554879 MTORP42345 2549 aa13.14□□□□□ -0.31
PCNX1-209ENST00000554879 IZUMO1RA6ND01 250 aa13.14□□□□□ -0.31
PCNX1-209ENST00000554879 H3BRM9 83 aa13.14□□□□□ -0.31
PCNX1-209ENST00000554879 ZFAND6Q6FIF0 208 aa13.14□□□□□ -0.31
PCNX1-209ENST00000554879 WNK1Q9H4A3 2382 aa13.13□□□□□ -0.31
PCNX1-209ENST00000554879 LMO4P61968 165 aa13.13□□□□□ -0.31
PCNX1-209ENST00000554879 MRPL32Q9BYC8 188 aaKnown RBP13.13□□□□□ -0.31
PCNX1-209ENST00000554879 G3V318 75 aa13.13□□□□□ -0.31
PCNX1-209ENST00000554879 CT45A10P0DMU9 189 aa13.13□□□□□ -0.31
PCNX1-209ENST00000554879 PSMB11A5LHX3 300 aa13.13□□□□□ -0.31
PCNX1-209ENST00000554879 TXNDC17Q9BRA2 123 aa13.13□□□□□ -0.31
PCNX1-209ENST00000554879 IGLV2-23P01705 113 aa13.12□□□□□ -0.31
PCNX1-209ENST00000554879 DSCR9P59020 149 aa13.12□□□□□ -0.31
PCNX1-209ENST00000554879 CACNG7P62955 275 aa13.12□□□□□ -0.31
PCNX1-209ENST00000554879 ACANP16112 2415 aa13.12□□□□□ -0.31
PCNX1-209ENST00000554879 IGHV1-69DA0A0B4J2H0 117 aa13.12□□□□□ -0.31
PCNX1-209ENST00000554879 TNFRSF13BO14836 293 aaPredicted RBP13.12□□□□□ -0.31
PCNX1-209ENST00000554879 SNCGO76070 127 aa13.12□□□□□ -0.31
PCNX1-209ENST00000554879 IGHV1-69P01742 117 aa13.12□□□□□ -0.31
PCNX1-209ENST00000554879 PSMB2P49721 201 aa13.12□□□□□ -0.31
PCNX1-209ENST00000554879 ZNF562Q6V9R5 426 aa13.12□□□□□ -0.31
PCNX1-209ENST00000554879 C10orf105Q8TEF2 133 aa13.12□□□□□ -0.31
PCNX1-209ENST00000554879 GAGE5Q13069 117 aa13.12□□□□□ -0.31
PCNX1-209ENST00000554879 GAGE6Q13070 117 aa13.12□□□□□ -0.31
PCNX1-209ENST00000554879 C15orf32Q32M92 178 aa13.12□□□□□ -0.31
PCNX1-209ENST00000554879 HIST2H2BCQ6DN03 193 aa13.12□□□□□ -0.31
PCNX1-209ENST00000554879 MRPL27Q9P0M9 148 aaKnown RBP13.12□□□□□ -0.31
PCNX1-209ENST00000554879 TRBV20OR9-2A0A075B6H5 130 aa13.11□□□□□ -0.31
PCNX1-209ENST00000554879 C1orf122Q6ZSJ8 110 aa13.11□□□□□ -0.31
PCNX1-209ENST00000554879 C8orf46Q8TAG6 207 aa13.11□□□□□ -0.31
PCNX1-209ENST00000554879 H7C2G1 150 aa13.11□□□□□ -0.31
PCNX1-209ENST00000554879 J3QKU1 62 aa13.11□□□□□ -0.31
PCNX1-209ENST00000554879 IGHV4-38-2P0DP08 117 aa13.11□□□□□ -0.31
PCNX1-209ENST00000554879 SCGB1A1P11684 91 aa13.11□□□□□ -0.31
PCNX1-209ENST00000554879 GNG5P63218 68 aa13.11□□□□□ -0.31
PCNX1-209ENST00000554879 SPATA12Q7Z6I5 190 aa13.11□□□□□ -0.31
PCNX1-209ENST00000554879 PRNTQ86SH4 94 aa13.11□□□□□ -0.31
PCNX1-209ENST00000554879 DYNAPQ8N1N2 210 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 LINC00479Q96M42 142 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 ATP6V0E1O15342 81 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 SLC25A16P16260 332 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 LINC00310P59036 64 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 HBBP68871 147 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 LY6G5BQ8NDX9 201 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 RNF125Q96EQ8 232 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 FLNCQ14315 2725 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 SRSF9Q13242 221 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCNX1-209ENST00000554879 MOB4Q9Y3A3 225 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 COL12A1Q99715 3063 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 CENPVL3A0A0U1RRI6 287 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 CGB1A6NKQ9 187 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 EMP1P54849 157 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 Q96MF0 132 aa13.1□□□□□ -0.31
PCNX1-209ENST00000554879 ZFHX4Q86UP3 3567 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 ZNF414Q96IQ9 312 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 MS4A6AQ9H2W1 248 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 J3KRW8 73 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 K7EN84 100 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 Q1RN00 199 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 ZNF329Q86UD4 541 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 HIVEP2P31629 2446 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 SMIM17P0DL12 118 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 GAGE2BQ13066 116 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 GAGE2EQ4V326 116 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 SCGB1D4Q6XE38 83 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 GOLT1AQ6ZVE7 132 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 LINC01356Q8N9X3 169 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 EEF1AKMT3Q96AZ1 226 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 GAGE2DQ9UEU5 116 aa13.09□□□□□ -0.31
PCNX1-209ENST00000554879 SIVA1O15304 175 aa13.08□□□□□ -0.31
PCNX1-209ENST00000554879 IGKV1OR2-108A0A075B7D4 117 aa13.08□□□□□ -0.32
PCNX1-209ENST00000554879 MRPL36Q9P0J6 103 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms