RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 PSG8Q9UQ74 426 aa10.71□□□□□ -0.69
SHOX2-206ENST00000554685 LENEPQ9Y5L5 61 aa10.71□□□□□ -0.69
SHOX2-206ENST00000554685 LY96Q9Y6Y9 160 aa10.71□□□□□ -0.69
SHOX2-206ENST00000554685 TRAV34A0A0B4J273 112 aa10.7□□□□□ -0.7
SHOX2-206ENST00000554685 TRBV7-9A0A0J9YWB2 115 aa10.7□□□□□ -0.7
SHOX2-206ENST00000554685 A0A0J9YX75 114 aa10.7□□□□□ -0.7
SHOX2-206ENST00000554685 ZNF138P52744 262 aa10.7□□□□□ -0.7
SHOX2-206ENST00000554685 PNRC1Q12796 327 aaPredicted RBP10.7□□□□□ -0.7
SHOX2-206ENST00000554685 TMEM241Q24JQ0 296 aa10.7□□□□□ -0.7
SHOX2-206ENST00000554685 ODF3L2Q3SX64 289 aa10.7□□□□□ -0.7
SHOX2-206ENST00000554685 CENPWQ5EE01 88 aa10.7□□□□□ -0.7
SHOX2-206ENST00000554685 BAGE2Q86Y30 109 aa10.7□□□□□ -0.7
SHOX2-206ENST00000554685 LINC00479Q96M42 142 aa10.7□□□□□ -0.7
SHOX2-206ENST00000554685 BIN3Q9NQY0 253 aa10.7□□□□□ -0.7
SHOX2-206ENST00000554685 PPP1R14DQ9NXH3 145 aa10.7□□□□□ -0.7
SHOX2-206ENST00000554685 CARHSP1Q9Y2V2 147 aaKnown RBP10.7□□□□□ -0.7
SHOX2-206ENST00000554685 TRAV8-1A0A0A6YYK1 113 aa10.69□□□□□ -0.7
SHOX2-206ENST00000554685 LTAP01374 205 aa10.69□□□□□ -0.7
SHOX2-206ENST00000554685 S100A1P23297 94 aa10.69□□□□□ -0.7
SHOX2-206ENST00000554685 C10orf91Q5T1B1 145 aa10.69□□□□□ -0.7
SHOX2-206ENST00000554685 PRNTQ86SH4 94 aa10.69□□□□□ -0.7
SHOX2-206ENST00000554685 IGF2BP2-AS1Q96M15 143 aa10.69□□□□□ -0.7
SHOX2-206ENST00000554685 ODF3Q96PU9 254 aa10.69□□□□□ -0.7
SHOX2-206ENST00000554685 VGLL1Q99990 258 aa10.69□□□□□ -0.7
SHOX2-206ENST00000554685 ATP6V1G1O75348 118 aa10.68□□□□□ -0.7
SHOX2-206ENST00000554685 IGLV2-11P01706 119 aa10.68□□□□□ -0.7
SHOX2-206ENST00000554685 HLA-DRB4P13762 266 aa10.68□□□□□ -0.7
SHOX2-206ENST00000554685 ADCYAP1P18509 176 aa10.68□□□□□ -0.7
SHOX2-206ENST00000554685 ERCC8Q13216 396 aa10.68□□□□□ -0.7
SHOX2-206ENST00000554685 AGPAT4-IT1Q9H0P7 198 aa10.68□□□□□ -0.7
SHOX2-206ENST00000554685 ZNF492Q9P255 531 aa10.68□□□□□ -0.7
SHOX2-206ENST00000554685 HLA-DRB4X5D2U9 266 aa10.68□□□□□ -0.7
SHOX2-206ENST00000554685 STAB1Q9NY15 2570 aa10.67□□□□□ -0.7
SHOX2-206ENST00000554685 F6UB75 175 aa10.67□□□□□ -0.7
SHOX2-206ENST00000554685 J3QL48 77 aa10.67□□□□□ -0.7
SHOX2-206ENST00000554685 CD7P09564 240 aa10.67□□□□□ -0.7
SHOX2-206ENST00000554685 ACTL10Q5JWF8 245 aa10.67□□□□□ -0.7
SHOX2-206ENST00000554685 STHQ8IWL8 128 aa10.67□□□□□ -0.7
SHOX2-206ENST00000554685 TMEM183AQ8IXX5 376 aa10.67□□□□□ -0.7
SHOX2-206ENST00000554685 SVBPQ8N300 66 aa10.67□□□□□ -0.7
SHOX2-206ENST00000554685 TVP23CQ96ET8 276 aa10.67□□□□□ -0.7
SHOX2-206ENST00000554685 SGK494Q96LW2 274 aa10.67□□□□□ -0.7
SHOX2-206ENST00000554685 CLUHP3Q96NS8 147 aa10.67□□□□□ -0.7
SHOX2-206ENST00000554685 PRR25Q96S07 402 aa10.67□□□□□ -0.7
SHOX2-206ENST00000554685 SDF2L1Q9HCN8 221 aa10.67□□□□□ -0.7
SHOX2-206ENST00000554685 TRBV20OR9-2A0A075B6H5 130 aa10.66□□□□□ -0.7
SHOX2-206ENST00000554685 KNCNA6PVL3 124 aa10.66□□□□□ -0.7
SHOX2-206ENST00000554685 H3BMM0 161 aa10.66□□□□□ -0.7
SHOX2-206ENST00000554685 ZNF705DP0CH99 300 aaPredicted RBP10.66□□□□□ -0.7
SHOX2-206ENST00000554685 ZNF705BP0CI00 300 aaPredicted RBP10.66□□□□□ -0.7
SHOX2-206ENST00000554685 CT45A10P0DMU9 189 aa10.66□□□□□ -0.7
SHOX2-206ENST00000554685 TSPOP30536 169 aa10.66□□□□□ -0.7
SHOX2-206ENST00000554685 LEPP41159 167 aa10.66□□□□□ -0.7
SHOX2-206ENST00000554685 EGFEM1PQ0D2K5 195 aa10.66□□□□□ -0.7
SHOX2-206ENST00000554685 OXLD1Q5BKU9 147 aa10.66□□□□□ -0.7
SHOX2-206ENST00000554685 APRG1Q8IVJ8 170 aa10.66□□□□□ -0.7
SHOX2-206ENST00000554685 OR4B1Q8NGF8 309 aa10.66□□□□□ -0.7
SHOX2-206ENST00000554685 Q8TAT8 98 aa10.66□□□□□ -0.7
SHOX2-206ENST00000554685 A8MTW9 85 aa10.65□□□□□ -0.7
SHOX2-206ENST00000554685 APOC3P02656 99 aa10.65□□□□□ -0.7
SHOX2-206ENST00000554685 PRB4P10163 310 aaPredicted RBP10.65□□□□□ -0.7
SHOX2-206ENST00000554685 MGST1P10620 155 aaKnown RBP10.65□□□□□ -0.7
SHOX2-206ENST00000554685 DEFB1P60022 68 aa10.65□□□□□ -0.7
SHOX2-206ENST00000554685 ADIRFQ15847 76 aa10.65□□□□□ -0.7
SHOX2-206ENST00000554685 SMUG1Q53HV7 270 aa10.65□□□□□ -0.7
SHOX2-206ENST00000554685 GDF5OSQ5U4N7 250 aa10.65□□□□□ -0.7
SHOX2-206ENST00000554685 COX8CQ7Z4L0 72 aa10.65□□□□□ -0.7
SHOX2-206ENST00000554685 LINC01551Q86U37 167 aa10.65□□□□□ -0.7
SHOX2-206ENST00000554685 OCC1Q8TAD7 63 aa10.65□□□□□ -0.7
SHOX2-206ENST00000554685 MLST8Q9BVC4 326 aa10.65□□□□□ -0.7
SHOX2-206ENST00000554685 C19orf73Q9NVV2 129 aa10.65□□□□□ -0.7
SHOX2-206ENST00000554685 B4DEV8 164 aa10.64□□□□□ -0.71
SHOX2-206ENST00000554685 M0R036 132 aa10.64□□□□□ -0.71
SHOX2-206ENST00000554685 SNAPINO95295 136 aa10.64□□□□□ -0.71
SHOX2-206ENST00000554685 AMBPP02760 352 aa10.64□□□□□ -0.71
SHOX2-206ENST00000554685 CRISP2P16562 243 aa10.64□□□□□ -0.71
SHOX2-206ENST00000554685 NUTF2P61970 127 aaKnown RBP10.64□□□□□ -0.71
SHOX2-206ENST00000554685 RPL23P62829 140 aaKnown RBP10.64□□□□□ -0.71
SHOX2-206ENST00000554685 PGPEP1LA6NFU8 196 aa10.63□□□□□ -0.71
SHOX2-206ENST00000554685 GCGP01275 180 aa10.63□□□□□ -0.71
SHOX2-206ENST00000554685 IGLV2-8P01709 118 aa10.63□□□□□ -0.71
SHOX2-206ENST00000554685 SAMD5Q5TGI4 173 aa10.63□□□□□ -0.71
SHOX2-206ENST00000554685 FAM19A4Q96LR4 140 aa10.63□□□□□ -0.71
SHOX2-206ENST00000554685 ANK2Q01484 3957 aa10.63□□□□□ -0.71
SHOX2-206ENST00000554685 VWFP04275 2813 aa10.63□□□□□ -0.71
SHOX2-206ENST00000554685 IGKV3-20P01619 116 aa10.62□□□□□ -0.71
SHOX2-206ENST00000554685 CDKN1BP46527 198 aa10.62□□□□□ -0.71
SHOX2-206ENST00000554685 ZNF124Q15973 351 aa10.62□□□□□ -0.71
SHOX2-206ENST00000554685 TRPT1Q86TN4 253 aaKnown RBP10.62□□□□□ -0.71
SHOX2-206ENST00000554685 C15orf54Q8N8G6 183 aa10.62□□□□□ -0.71
SHOX2-206ENST00000554685 NHLRC2Q8NBF2 726 aa10.62□□□□□ -0.71
SHOX2-206ENST00000554685 DAZAP1Q96EP5 407 aaKnown RBP10.62□□□□□ -0.71
SHOX2-206ENST00000554685 ASCL2Q99929 193 aa10.62□□□□□ -0.71
SHOX2-206ENST00000554685 PPP1R2P9O14990 202 aa10.61□□□□□ -0.71
SHOX2-206ENST00000554685 GPX1P07203 203 aa10.61□□□□□ -0.71
SHOX2-206ENST00000554685 RHEBQ15382 184 aa10.61□□□□□ -0.71
SHOX2-206ENST00000554685 FAM162BQ5T6X4 162 aa10.61□□□□□ -0.71
SHOX2-206ENST00000554685 MORN3Q6PF18 240 aaPredicted RBP10.61□□□□□ -0.71
SHOX2-206ENST00000554685 AMTNQ6UX39 209 aa10.61□□□□□ -0.71
SHOX2-206ENST00000554685 CLRN3Q8NCR9 226 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms