RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 LYRM9A8MSI8 78 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 ZNF253O75346 499 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 SEC11BP0C7V7 166 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 P0DMU3 169 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 FAM231AP0DMU4 169 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 FAM231CP0DMU5 169 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 HIST1H1EP10412 219 aaKnown RBP6.22□□□□□ -1.41
ACTN1-213ENST00000554508 TSPOP30536 169 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 CDKN1BP46527 198 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 UBE2L3P68036 154 aaKnown RBP6.22□□□□□ -1.41
ACTN1-213ENST00000554508 SLC51BQ86UW2 128 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 OR10J6PQ8NGY7 276 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 STOML3Q8TAV4 291 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 RNF141Q8WVD5 230 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 TMED6Q8WW62 240 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 RAB24Q969Q5 203 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 FAM167A-AS1Q96KT0 104 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 ZNF586Q9NXT0 402 aa6.22□□□□□ -1.41
ACTN1-213ENST00000554508 TRBV19A0A075B6N1 114 aa6.21□□□□□ -1.42
ACTN1-213ENST00000554508 TRAV12-2A0A075B6T6 113 aa6.21□□□□□ -1.42
ACTN1-213ENST00000554508 ZNF705GA8MUZ8 300 aaPredicted RBP6.21□□□□□ -1.42
ACTN1-213ENST00000554508 SLC17A3O00476 420 aa6.21□□□□□ -1.42
ACTN1-213ENST00000554508 NBEAP1P0C6P0 100 aa6.21□□□□□ -1.42
ACTN1-213ENST00000554508 TAS2R60P59551 318 aa6.21□□□□□ -1.42
ACTN1-213ENST00000554508 DAD1P61803 113 aa6.21□□□□□ -1.42
ACTN1-213ENST00000554508 EIF5AL1Q6IS14 154 aaKnown RBP6.21□□□□□ -1.42
ACTN1-213ENST00000554508 IQCF2Q8IXL9 164 aa6.21□□□□□ -1.42
ACTN1-213ENST00000554508 FXYD5Q96DB9 178 aa6.21□□□□□ -1.42
ACTN1-213ENST00000554508 LINC01587Q99440 93 aa6.21□□□□□ -1.42
ACTN1-213ENST00000554508 C20orf144Q9BQM9 153 aa6.21□□□□□ -1.42
ACTN1-213ENST00000554508 BIRC6Q9NR09 4857 aa6.21□□□□□ -1.42
ACTN1-213ENST00000554508 CTXND1A0A1B0GTU2 59 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 UMAD1C9J7I0 102 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 H7BYZ3 331 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 CXorf1O96002 111 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 STAG3L2P0CL84 134 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 STAG3L3P0CL85 134 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 ARL14EPLP0DKL9 152 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 PRB4P10163 310 aaPredicted RBP6.2□□□□□ -1.42
ACTN1-213ENST00000554508 FHITP49789 147 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 RANP62826 216 aaKnown RBP6.2□□□□□ -1.42
ACTN1-213ENST00000554508 PDE6HQ13956 83 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 PQLC2Q6ZP29 291 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 ZNF493Q6ZR52 646 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 SSX7Q7RTT5 188 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 FAM213BQ8TBF2 198 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 MRPL53Q96EL3 112 aaKnown RBP6.2□□□□□ -1.42
ACTN1-213ENST00000554508 ZNF503Q96F45 646 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 ODF3Q96PU9 254 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 AAMDCQ9H7C9 122 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 PLA2G2EQ9NZK7 142 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 PRELID1Q9Y255 219 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 BOLA1Q9Y3E2 137 aa6.2□□□□□ -1.42
ACTN1-213ENST00000554508 DNAH17Q9UFH2 4485 aa6.19□□□□□ -1.42
ACTN1-213ENST00000554508 PRAC2D3DTV9 90 aa6.19□□□□□ -1.42
ACTN1-213ENST00000554508 NDUFB4O95168 129 aa6.19□□□□□ -1.42
ACTN1-213ENST00000554508 AZU1P20160 251 aa6.19□□□□□ -1.42
ACTN1-213ENST00000554508 GCHFRP30047 84 aa6.19□□□□□ -1.42
ACTN1-213ENST00000554508 LEPP41159 167 aa6.19□□□□□ -1.42
ACTN1-213ENST00000554508 FGF8P55075 233 aaPredicted RBP6.19□□□□□ -1.42
ACTN1-213ENST00000554508 ICAM4Q14773 271 aa6.19□□□□□ -1.42
ACTN1-213ENST00000554508 ZNF726P1Q15940 193 aa6.19□□□□□ -1.42
ACTN1-213ENST00000554508 EXOC3-AS1Q8N2X6 119 aa6.19□□□□□ -1.42
ACTN1-213ENST00000554508 POM121L12Q8N7R1 296 aa6.19□□□□□ -1.42
ACTN1-213ENST00000554508 PHYHIPLQ96FC7 376 aa6.19□□□□□ -1.42
ACTN1-213ENST00000554508 C16orf74Q96GX8 76 aa6.19□□□□□ -1.42
ACTN1-213ENST00000554508 DNAH2Q9P225 4427 aa6.19□□□□□ -1.42
ACTN1-213ENST00000554508 NACAE9PAV3 2078 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 A0A1B0GV50 99 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 MAP1LC3B2A6NCE7 125 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 NPIPB6E9PJ23 425 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 PRM2P04554 102 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 CT45A10P0DMU9 189 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 HTN1P15515 57 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 HTN3P15516 51 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 DPPA3Q6W0C5 159 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 CCDC28AQ8IWP9 274 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 C15orf53Q8NAA6 179 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 TMEM263Q8WUH6 116 aaKnown RBP6.18□□□□□ -1.42
ACTN1-213ENST00000554508 SFT2D1Q8WV19 159 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 LINC00477Q96M19 166 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 MAP1LC3BQ9GZQ8 125 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 TMEM167BQ9NRX6 74 aa6.18□□□□□ -1.42
ACTN1-213ENST00000554508 TIMM8BQ9Y5J9 83 aaPredicted RBP6.18□□□□□ -1.42
ACTN1-213ENST00000554508 PLAC8L1A1L4L8 177 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 CBY3A6NI87 242 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 M0R3E3 92 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 SLC25A5P05141 298 aaKnown RBP6.17□□□□□ -1.42
ACTN1-213ENST00000554508 ATP5G1P05496 136 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 H2AFB1P0C5Y9 115 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 DEFB130BP0DP73 79 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 DEFB130AP0DP74 79 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 CSN1S1P47710 185 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 ATP5G3P48201 142 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 RAB5CP51148 216 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 RNF212Q495C1 297 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 FAM74A1Q5RGS3 127 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 GFI1BQ5VTD9 330 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 ALKAL2Q6UX46 152 aa6.17□□□□□ -1.42
ACTN1-213ENST00000554508 LYPD1Q8N2G4 141 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms