RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 RPL7P18124 248 aaKnown RBP9.52□□□□□ -0.89
SHMT2-211ENST00000554310 TAS2R45P59539 299 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 TMEM241Q24JQ0 296 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 RNF212Q495C1 297 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 FAM78BQ5VT40 261 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 SPATA31B1PQ5VZV4 182 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 OR1L4Q8NGR5 311 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 YPEL4Q96NS1 127 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 PFDN5Q99471 154 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 LYSTQ99698 3801 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 SMIM7Q9BQ49 75 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 PARLQ9H300 379 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 SAV1Q9H4B6 383 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-211ENST00000554310 TMEM167BQ9NRX6 74 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 TMEM242Q9NWH2 141 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 PRELID1Q9Y255 219 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 RYR2Q92736 4967 aa9.51□□□□□ -0.89
SHMT2-211ENST00000554310 FLI1Q01543 452 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-211ENST00000554310 PQLC2Q6ZP29 291 aa9.51□□□□□ -0.89
SHMT2-211ENST00000554310 MIR17HGQ75NE6 70 aa9.51□□□□□ -0.89
SHMT2-211ENST00000554310 HIST1H2BAQ96A08 127 aa9.51□□□□□ -0.89
SHMT2-211ENST00000554310 C16orf92Q96LL3 132 aa9.51□□□□□ -0.89
SHMT2-211ENST00000554310 CLUHP3Q96NS8 147 aa9.51□□□□□ -0.89
SHMT2-211ENST00000554310 CTDSP1Q9GZU7 261 aa9.51□□□□□ -0.89
SHMT2-211ENST00000554310 MIFP14174 115 aa9.5□□□□□ -0.89
SHMT2-211ENST00000554310 ATP5G3P48201 142 aa9.5□□□□□ -0.89
SHMT2-211ENST00000554310 GDF5OSQ5U4N7 250 aa9.5□□□□□ -0.89
SHMT2-211ENST00000554310 CST9LP1Q5W188 147 aa9.5□□□□□ -0.89
SHMT2-211ENST00000554310 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.5□□□□□ -0.89
SHMT2-211ENST00000554310 CSNK1G2-AS1Q8NCQ2 148 aa9.5□□□□□ -0.89
SHMT2-211ENST00000554310 RPUSD4Q96CM3 377 aaKnown RBP9.5□□□□□ -0.89
SHMT2-211ENST00000554310 UHRF2Q96PU4 802 aa9.5□□□□□ -0.89
SHMT2-211ENST00000554310 DNAJC4Q9NNZ3 241 aa9.5□□□□□ -0.89
SHMT2-211ENST00000554310 UBE2G2P60604 165 aa9.49□□□□□ -0.89
SHMT2-211ENST00000554310 RPL23P62829 140 aaKnown RBP9.49□□□□□ -0.89
SHMT2-211ENST00000554310 EBLN2Q6P2I7 272 aa9.49□□□□□ -0.89
SHMT2-211ENST00000554310 Q8NAQ8 132 aa9.49□□□□□ -0.89
SHMT2-211ENST00000554310 TMEM37Q8WXS4 190 aa9.49□□□□□ -0.89
SHMT2-211ENST00000554310 C11orf52Q96A22 123 aa9.49□□□□□ -0.89
SHMT2-211ENST00000554310 ISOC2Q96AB3 205 aa9.49□□□□□ -0.89
SHMT2-211ENST00000554310 C17orf77Q96MU5 243 aa9.49□□□□□ -0.89
SHMT2-211ENST00000554310 CLEC5AQ9NY25 188 aa9.49□□□□□ -0.89
SHMT2-211ENST00000554310 ELOA3CA0A087WX78 387 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-211ENST00000554310 A0A087X0K7 114 aa9.48□□□□□ -0.89
SHMT2-211ENST00000554310 IGHV4-28A0A0C4DH34 117 aa9.48□□□□□ -0.89
SHMT2-211ENST00000554310 A0A0J9YX75 114 aa9.48□□□□□ -0.89
SHMT2-211ENST00000554310 COX7A2P2O60397 106 aa9.48□□□□□ -0.89
SHMT2-211ENST00000554310 RAB5AP20339 215 aa9.48□□□□□ -0.89
SHMT2-211ENST00000554310 DEFB1P60022 68 aa9.48□□□□□ -0.89
SHMT2-211ENST00000554310 ZNF674Q2M3X9 581 aa9.48□□□□□ -0.89
SHMT2-211ENST00000554310 C10orf113Q5VZT2 155 aa9.48□□□□□ -0.89
SHMT2-211ENST00000554310 C11orf45Q8TAV5 145 aa9.48□□□□□ -0.89
SHMT2-211ENST00000554310 ZNF503Q96F45 646 aa9.48□□□□□ -0.89
SHMT2-211ENST00000554310 XCL2Q9UBD3 114 aa9.48□□□□□ -0.89
SHMT2-211ENST00000554310 YTHDF2Q9Y5A9 579 aaKnown RBP9.48□□□□□ -0.89
SHMT2-211ENST00000554310 X6R8D5 127 aa9.48□□□□□ -0.89
SHMT2-211ENST00000554310 SACSQ9NZJ4 4579 aa9.48□□□□□ -0.89
SHMT2-211ENST00000554310 ALMS1Q8TCU4 4167 aa9.47□□□□□ -0.89
SHMT2-211ENST00000554310 ADIRFQ15847 76 aa9.47□□□□□ -0.89
SHMT2-211ENST00000554310 CEMP1Q6PRD7 247 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-211ENST00000554310 PATE2Q6UY27 113 aa9.47□□□□□ -0.89
SHMT2-211ENST00000554310 LINC00305Q7Z4B0 112 aa9.47□□□□□ -0.89
SHMT2-211ENST00000554310 OR4B1Q8NGF8 309 aa9.47□□□□□ -0.89
SHMT2-211ENST00000554310 FAM167A-AS1Q96KT0 104 aa9.47□□□□□ -0.89
SHMT2-211ENST00000554310 C20orf173Q96LM9 149 aa9.47□□□□□ -0.89
SHMT2-211ENST00000554310 SLC25A2Q9BXI2 301 aa9.47□□□□□ -0.89
SHMT2-211ENST00000554310 KLK5Q9Y337 293 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-211ENST00000554310 TRAV8-2A0A0B4J237 113 aa9.46□□□□□ -0.9
SHMT2-211ENST00000554310 A0A1W2PRE2 83 aa9.46□□□□□ -0.9
SHMT2-211ENST00000554310 A8MTW9 85 aa9.46□□□□□ -0.9
SHMT2-211ENST00000554310 C1orf196B1AJZ1 125 aa9.46□□□□□ -0.9
SHMT2-211ENST00000554310 F6UB75 175 aa9.46□□□□□ -0.9
SHMT2-211ENST00000554310 MRPS12O15235 138 aaKnown RBP9.46□□□□□ -0.9
SHMT2-211ENST00000554310 DEFB4AO15263 64 aa9.46□□□□□ -0.9
SHMT2-211ENST00000554310 OR7C2O60412 319 aa9.46□□□□□ -0.9
SHMT2-211ENST00000554310 NDUFB4O95168 129 aa9.46□□□□□ -0.9
SHMT2-211ENST00000554310 IGKV3-20P01619 116 aa9.46□□□□□ -0.9
SHMT2-211ENST00000554310 ELOBQ15370 118 aa9.46□□□□□ -0.9
SHMT2-211ENST00000554310 ANAPC16Q96DE5 110 aa9.46□□□□□ -0.9
SHMT2-211ENST00000554310 C9JCJ5 164 aa9.45□□□□□ -0.9
SHMT2-211ENST00000554310 RBMY1A1P0DJD3 496 aaKnown RBP9.45□□□□□ -0.9
SHMT2-211ENST00000554310 RBMY1CP0DJD4 496 aa9.45□□□□□ -0.9
SHMT2-211ENST00000554310 NANOS2P60321 138 aaKnown RBP9.45□□□□□ -0.9
SHMT2-211ENST00000554310 RAB5BP61020 215 aa9.45□□□□□ -0.9
SHMT2-211ENST00000554310 PSG9Q00887 426 aa9.45□□□□□ -0.9
SHMT2-211ENST00000554310 RBMY1FQ15415 496 aaKnown RBP9.45□□□□□ -0.9
SHMT2-211ENST00000554310 ZNF705AQ6ZN79 300 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-211ENST00000554310 BPIFA4PQ86YQ2 179 aa9.45□□□□□ -0.9
SHMT2-211ENST00000554310 RNF182Q8N6D2 247 aa9.45□□□□□ -0.9
SHMT2-211ENST00000554310 ZNF738Q8NE65 137 aa9.45□□□□□ -0.9
SHMT2-211ENST00000554310 PHLDA1Q8WV24 401 aaPredicted RBP9.45□□□□□ -0.9
SHMT2-211ENST00000554310 NEU1Q99519 415 aa9.45□□□□□ -0.9
SHMT2-211ENST00000554310 LY96Q9Y6Y9 160 aa9.45□□□□□ -0.9
SHMT2-211ENST00000554310 DNAH1Q9P2D7 4330 aa9.45□□□□□ -0.9
SHMT2-211ENST00000554310 SCO2A0A1W2PP80 73 aa9.44□□□□□ -0.9
SHMT2-211ENST00000554310 ZNF705FA8MVS1 300 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-211ENST00000554310 DUSP14O95147 198 aaKnown RBP9.44□□□□□ -0.9
SHMT2-211ENST00000554310 ZNF705DP0CH99 300 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-211ENST00000554310 ZNF705BP0CI00 300 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-211ENST00000554310 UBE2L3P68036 154 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 181.3 ms