RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 KIAA1644Q3SXP7 199 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 Q56UQ5 140 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 FAM120AOSQ5T036 256 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 LINC00305Q7Z4B0 112 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 TMEM75Q8N9X5 138 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 ZNRF1Q8ND25 227 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 OR10AG1Q8NH19 301 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 OR9G1Q8NH87 305 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 C8orf46Q8TAG6 207 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 C10orf105Q8TEF2 133 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 ITLN1Q8WWA0 313 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 H1FXQ92522 213 aaKnown RBP4.66□□□□□ -1.66
VPS33B-203ENST00000554264 DCTN5Q9BTE1 182 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 TM2D2Q9BX73 214 aa4.66□□□□□ -1.66
VPS33B-203ENST00000554264 IGHV1-24A0A0C4DH33 117 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 A0A1B0GUT8 65 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 NDUFS8O00217 210 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 CCL25O15444 150 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 FSTL3O95633 263 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 RBP4P02753 201 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 CT45A10P0DMU9 189 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 HINT1P49773 126 aaPredicted RBP4.65□□□□□ -1.67
VPS33B-203ENST00000554264 RBX1P62877 108 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 PDE6HQ13956 83 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 LINC01545Q5VT33 79 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 C11orf71Q6IPW1 123 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 EBLN2Q6P2I7 272 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 C16orf54Q6UWD8 224 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 IL17RELQ6ZVW7 336 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 Q86TA4 180 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 FAM19A2Q8N3H0 131 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 OR4X2Q8NGF9 303 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 OR2T6Q8NHC8 308 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 PIFOQ8TCI5 191 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 AP1S3Q96PC3 154 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 SCRT2Q9NQ03 307 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 HIGD1AQ9Y241 93 aa4.65□□□□□ -1.67
VPS33B-203ENST00000554264 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.64□□□□□ -1.67
VPS33B-203ENST00000554264 IGKV1D-37A0A075B6S9 117 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 PGPA6NDG6 321 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 NDUFB3O43676 98 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 SPINK4O60575 86 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 TNFRSF6BO95407 300 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 IGHV1-46P01743 117 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 IGKV1-16P04430 117 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 COX8AP10176 69 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 GP9P14770 177 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 HTR1DP28221 377 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 GPR183P32249 361 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 TFPI2P48307 235 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 CAMPP49913 170 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 GNG10P50151 68 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 EFNA4P52798 201 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 LINC00205P59089 165 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 SLC35B1P78383 322 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 BVES-AS1Q5T3Y7 98 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 FAM53AQ6NSI3 398 aaPredicted RBP4.64□□□□□ -1.67
VPS33B-203ENST00000554264 ZNF493Q6ZR52 646 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 FA2HQ7L5A8 372 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 BPIFA4PQ86YQ2 179 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.64□□□□□ -1.67
VPS33B-203ENST00000554264 OR5A1Q8NGJ0 315 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 NPIPB3Q92617 1050 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 PIMREGQ9BSJ6 248 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 RAB1BQ9H0U4 201 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 KAAG1Q9UBP8 84 aa4.64□□□□□ -1.67
VPS33B-203ENST00000554264 IGHV3OR15-7A0A075B7D8 119 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 TRAV34A0A0B4J273 112 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 IGHV3-64DA0A0J9YX35 117 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 M0R1B8 84 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 SPRY3O43610 288 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 TGFAP01135 160 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 SMIM17P0DL12 118 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 PYYP10082 97 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 HLA-DRB4P13762 266 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 RPL27AP46776 148 aaKnown RBP4.63□□□□□ -1.67
VPS33B-203ENST00000554264 WT1-ASQ06250 92 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 HSD52Q0P140 79 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 LGALS9BQ3B8N2 356 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 LGALS9CQ6DKI2 356 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 PRR27Q6MZM9 219 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 UNQ5815/PRO19632Q6UWF5 114 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 PATE2Q6UY27 113 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 TCF24Q7RTU0 167 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 COX8CQ7Z4L0 72 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 C3orf56Q8N813 242 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 GLMPQ8WWB7 406 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 ST6GALNAC6Q969X2 333 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 ZNF48Q96MX3 618 aaPredicted RBP4.63□□□□□ -1.67
VPS33B-203ENST00000554264 MRPL20Q9BYC9 149 aaKnown RBP4.63□□□□□ -1.67
VPS33B-203ENST00000554264 KRTAP17-1Q9BYP8 105 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 Q9H3A6 140 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 HLA-DRB4X5D2U9 266 aa4.63□□□□□ -1.67
VPS33B-203ENST00000554264 ANK2Q01484 3957 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 PPIAL4EA0A075B759 164 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 LOC105371242A0A075B767 164 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 TRAV5A0A0B4J249 113 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 C7orf71A4D174 169 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 E7EQL1 145 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 PPIAL4DF5H284 164 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms