RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 BAGE2Q86Y30 109 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 WFDC3Q8IUB2 231 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 OR8A1Q8NGG7 326 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 LINC00479Q96M42 142 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 NDFIP1Q9BT67 221 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 BIN3Q9NQY0 253 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 PSG8Q9UQ74 426 aa5.72□□□□□ -1.49
TDP1-209ENST00000554180 ZNF256Q9Y2P7 627 aaPredicted RBP5.72□□□□□ -1.49
TDP1-209ENST00000554180 A0A0J9YX75 114 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 IZUMO1RA6ND01 250 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 PRAC2D3DTV9 90 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 M0R036 132 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 ZNF138P52744 262 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 RPL23P62829 140 aaKnown RBP5.71□□□□□ -1.5
TDP1-209ENST00000554180 ADIRFQ15847 76 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 BEAN1Q3B7T3 259 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 EBLN2Q6P2I7 272 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 PRNTQ86SH4 94 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 TMEM183AQ8IXX5 376 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 FAM24BQ8N5W8 94 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 CLRN3Q8NCR9 226 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 LINC00477Q96M19 166 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 ODF3Q96PU9 254 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 VGLL1Q99990 258 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 MLST8Q9BVC4 326 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 SAV1Q9H4B6 383 aaPredicted RBP5.71□□□□□ -1.5
TDP1-209ENST00000554180 MAP6D1Q9H9H5 199 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 SELENOKQ9Y6D0 94 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 ANK2Q01484 3957 aa5.71□□□□□ -1.5
TDP1-209ENST00000554180 A0A087WWC5 75 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 OR11H12B2RN74 326 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 DUSP14O95147 198 aaKnown RBP5.7□□□□□ -1.5
TDP1-209ENST00000554180 GCGP01275 180 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 IGLV2-8P01709 118 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 CT45A10P0DMU9 189 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 HLA-DRB4P13762 266 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 HIST1H1AQ02539 215 aaPredicted RBP5.7□□□□□ -1.5
TDP1-209ENST00000554180 ODF3L2Q3SX64 289 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 PRR31Q5SQ13 230 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 OCC1Q8TAD7 63 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 ISOC2Q96AB3 205 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 CLUHP3Q96NS8 147 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 PRR25Q96S07 402 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 AGPAT4-IT1Q9H0P7 198 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 ZNF492Q9P255 531 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 HLA-DRB4X5D2U9 266 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 TRRAPQ9Y4A5 3859 aa5.7□□□□□ -1.5
TDP1-209ENST00000554180 PGPEP1LA6NFU8 196 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 A8MTW9 85 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 K7EN84 100 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 PPP1R2P9O14990 202 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 MT-ND4LP03901 98 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 CRISP2P16562 243 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 DEFB131AP59861 70 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 ERCC8Q13216 396 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 FAM231DQ6ZW35 169 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 Q8TAT8 98 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 ANAPC16Q96DE5 110 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 SFRP2Q96HF1 295 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 FAM19A4Q96LR4 140 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 SGK494Q96LW2 274 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 CTDSP1Q9GZU7 261 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 OSTCQ9NRP0 149 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 TMEM242Q9NWH2 141 aa5.69□□□□□ -1.5
TDP1-209ENST00000554180 ZMAT5Q9UDW3 170 aaKnown RBP5.69□□□□□ -1.5
TDP1-209ENST00000554180 SORL1Q92673 2214 aa5.68□□□□□ -1.5
TDP1-209ENST00000554180 C7orf77A4D0Y5 90 aa5.68□□□□□ -1.5
TDP1-209ENST00000554180 F6UB75 175 aa5.68□□□□□ -1.5
TDP1-209ENST00000554180 MGST1P10620 155 aaKnown RBP5.68□□□□□ -1.5
TDP1-209ENST00000554180 TSPOP30536 169 aa5.68□□□□□ -1.5
TDP1-209ENST00000554180 LEPP41159 167 aa5.68□□□□□ -1.5
TDP1-209ENST00000554180 SMUG1Q53HV7 270 aa5.68□□□□□ -1.5
TDP1-209ENST00000554180 IBA57Q5T440 356 aaKnown RBP5.68□□□□□ -1.5
TDP1-209ENST00000554180 FAM162BQ5T6X4 162 aa5.68□□□□□ -1.5
TDP1-209ENST00000554180 GTSCR1Q86UQ5 136 aa5.68□□□□□ -1.5
TDP1-209ENST00000554180 APRG1Q8IVJ8 170 aa5.68□□□□□ -1.5
TDP1-209ENST00000554180 C15orf54Q8N8G6 183 aa5.68□□□□□ -1.5
TDP1-209ENST00000554180 NHLRC2Q8NBF2 726 aa5.68□□□□□ -1.5
TDP1-209ENST00000554180 SPATA3Q8NHX4 192 aa5.68□□□□□ -1.5
TDP1-209ENST00000554180 ZC2HC1AQ96GY0 325 aa5.68□□□□□ -1.5
TDP1-209ENST00000554180 MGAM2Q2M2H8 2515 aa5.68□□□□□ -1.5
TDP1-209ENST00000554180 C19orf71A6NCJ1 209 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 CXorf65A6NEN9 183 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 KLLNB2CW77 178 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 H3BMM0 161 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 H7BYZ3 331 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 P01737 135 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 PFN1P07737 140 aaKnown RBP5.67□□□□□ -1.5
TDP1-209ENST00000554180 ZNF705DP0CH99 300 aaPredicted RBP5.67□□□□□ -1.5
TDP1-209ENST00000554180 ZNF705BP0CI00 300 aaPredicted RBP5.67□□□□□ -1.5
TDP1-209ENST00000554180 IGLL1P15814 213 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 DEFB1P60022 68 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 ERVFC1-1P60608 527 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 OR5I1Q13606 314 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 KRTAP21-3Q3LHN1 58 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 RNF212Q495C1 297 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 CT83Q5H943 113 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 ACTL10Q5JWF8 245 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 GDF5OSQ5U4N7 250 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 PRR27Q6MZM9 219 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms