RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 IGHV3-13P01766 116 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 COX6B1P14854 86 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 TNFRSF4P43489 277 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 RPS19BP1Q86WX3 136 aaKnown RBP7.45□□□□□ -1.22
SIX4-202ENST00000554079 ZCCHC24Q8N2G6 241 aaKnown RBP7.45□□□□□ -1.22
SIX4-202ENST00000554079 PLA2G2FQ9BZM2 168 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 OBP2BQ9NPH6 170 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 FAM236AA0A1B0GUQ0 79 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 FAM236BA0A1B0GV22 79 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 F8VRH5 84 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 TM4SF5O14894 197 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 TNFRSF6BO95407 300 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 IGHV4-34P06331 123 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 UTF1Q5T230 341 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 C6orf15Q6UXA7 325 aaPredicted RBP7.45□□□□□ -1.22
SIX4-202ENST00000554079 C17orf82Q86X59 251 aaPredicted RBP7.45□□□□□ -1.22
SIX4-202ENST00000554079 EXOC3-AS1Q8N2X6 119 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 Q8N8P6 123 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 OR4C13Q8NGP0 309 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 MRAPQ8TCY5 172 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 KNL1Q8NG31 2342 aa7.45□□□□□ -1.22
SIX4-202ENST00000554079 TRAV12-1A0A0B4J245 112 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 FAM240AA0A1B0GVK7 77 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 H3BMM0 161 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 GRPP07492 148 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 EMP1P54849 157 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 CEMP1Q6PRD7 247 aaPredicted RBP7.44□□□□□ -1.22
SIX4-202ENST00000554079 UBE2WQ96B02 151 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 DEFB126Q9BYW3 111 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 SVILO95425 2214 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 ZNF815PA8K554 130 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 INS-IGF2F8WCM5 200 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 F8WDY8 70 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 H7C1H1 209 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 IGHV3-48P01763 117 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 SAA2P0DJI9 122 aaPredicted RBP7.44□□□□□ -1.22
SIX4-202ENST00000554079 HLA-DMBP28068 263 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 UCNP55089 124 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 CFHR1Q03591 330 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 IGFBPL1Q8WX77 278 aa7.44□□□□□ -1.22
SIX4-202ENST00000554079 DSCAMO60469 2012 aa7.43□□□□□ -1.22
SIX4-202ENST00000554079 NAV3Q8IVL0 2385 aa7.43□□□□□ -1.22
SIX4-202ENST00000554079 CD3EP07766 207 aa7.43□□□□□ -1.22
SIX4-202ENST00000554079 SRSF9Q13242 221 aaKnown RBP eCLIP7.43□□□□□ -1.22
SIX4-202ENST00000554079 ZNF56Q15929 161 aa7.43□□□□□ -1.22
SIX4-202ENST00000554079 LINC01620Q4KN68 170 aa7.43□□□□□ -1.22
SIX4-202ENST00000554079 ZNF826PQ6ZT77 177 aa7.43□□□□□ -1.22
SIX4-202ENST00000554079 DTX2Q86UW9 622 aa7.43□□□□□ -1.22
SIX4-202ENST00000554079 TMEM190Q8WZ59 177 aa7.43□□□□□ -1.22
SIX4-202ENST00000554079 C8orf49Q96NF6 230 aa7.43□□□□□ -1.22
SIX4-202ENST00000554079 NDUFA4L2Q9NRX3 87 aa7.43□□□□□ -1.22
SIX4-202ENST00000554079 SPANXCQ9NY87 97 aa7.43□□□□□ -1.22
SIX4-202ENST00000554079 CTSZQ9UBR2 303 aa7.43□□□□□ -1.22
SIX4-202ENST00000554079 ASXL3Q9C0F0 2248 aa7.43□□□□□ -1.22
SIX4-202ENST00000554079 P0DMU3 169 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 FAM231AP0DMU4 169 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 FAM231CP0DMU5 169 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 EDDM3AQ14507 147 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 RUSC1-AS1Q66K80 236 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 IMUPQ9GZP8 106 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 PRO1854Q9UHT4 67 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 TRGV11A0A075B6L2 103 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 K7ESF4 209 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 EIF4EBP3O60516 100 aaPredicted RBP7.42□□□□□ -1.22
SIX4-202ENST00000554079 SH2D1AO60880 128 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 IGHV3-30P01768 117 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 IGHV3-30-5P0DP03 117 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 GATA1P15976 413 aaPredicted RBP7.42□□□□□ -1.22
SIX4-202ENST00000554079 PMVKQ15126 192 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 MRPL14Q6P1L8 145 aaKnown RBP7.42□□□□□ -1.22
SIX4-202ENST00000554079 MDP1Q86V88 176 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 PSMG3-AS1Q96PY0 264 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 FSCN3Q9NQT6 498 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 TMEM14CQ9P0S9 112 aa7.42□□□□□ -1.22
SIX4-202ENST00000554079 A0A0J9YY99 117 aa7.41□□□□□ -1.22
SIX4-202ENST00000554079 TRBV10-2A0A0K0K1G8 114 aa7.41□□□□□ -1.22
SIX4-202ENST00000554079 E7EUB6 86 aa7.41□□□□□ -1.22
SIX4-202ENST00000554079 OXTP01178 125 aa7.41□□□□□ -1.22
SIX4-202ENST00000554079 SAA1P0DJI8 122 aaPredicted RBP7.41□□□□□ -1.22
SIX4-202ENST00000554079 SLC25A16P16260 332 aa7.41□□□□□ -1.22
SIX4-202ENST00000554079 ERHP84090 104 aaKnown RBP7.41□□□□□ -1.22
SIX4-202ENST00000554079 DEFB121Q5J5C9 76 aa7.41□□□□□ -1.22
SIX4-202ENST00000554079 Q5XG85 94 aa7.41□□□□□ -1.22
SIX4-202ENST00000554079 SCGB1D4Q6XE38 83 aa7.41□□□□□ -1.22
SIX4-202ENST00000554079 CD177Q8N6Q3 437 aa7.41□□□□□ -1.22
SIX4-202ENST00000554079 LEAP2Q969E1 77 aa7.41□□□□□ -1.22
SIX4-202ENST00000554079 IGKV3D-15A0A087WSY6 115 aa7.4□□□□□ -1.22
SIX4-202ENST00000554079 CGB1A6NKQ9 187 aa7.4□□□□□ -1.22
SIX4-202ENST00000554079 MRPL33O75394 65 aaKnown RBP7.4□□□□□ -1.22
SIX4-202ENST00000554079 IGHV3-33P01772 117 aa7.4□□□□□ -1.22
SIX4-202ENST00000554079 CRYGBP07316 175 aa7.4□□□□□ -1.22
SIX4-202ENST00000554079 ELANEP08246 267 aa7.4□□□□□ -1.22
SIX4-202ENST00000554079 CRYGAP11844 174 aa7.4□□□□□ -1.22
SIX4-202ENST00000554079 C4orf26Q17RF5 130 aa7.4□□□□□ -1.22
SIX4-202ENST00000554079 CXorf67Q86X51 503 aaPredicted RBP7.4□□□□□ -1.22
SIX4-202ENST00000554079 PRR25Q96S07 402 aa7.4□□□□□ -1.22
SIX4-202ENST00000554079 SDK2Q58EX2 2172 aa7.4□□□□□ -1.22
SIX4-202ENST00000554079 DOCK10Q96BY6 2186 aa7.4□□□□□ -1.22
SIX4-202ENST00000554079 OVOL1O14753 267 aa7.4□□□□□ -1.23
SIX4-202ENST00000554079 IGKV1-16P04430 117 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms