RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 PPP1R14DQ9NXH3 145 aa8.97□□□□□ -0.97
SHMT2-209ENST00000553949 HUWE1Q7Z6Z7 4374 aaKnown RBP8.96□□□□□ -0.97
SHMT2-209ENST00000553949 SERTM2A0A1B0GWG4 89 aa8.96□□□□□ -0.98
SHMT2-209ENST00000553949 C11orf94C9JXX5 98 aa8.96□□□□□ -0.98
SHMT2-209ENST00000553949 PEX7O00628 323 aa8.96□□□□□ -0.98
SHMT2-209ENST00000553949 UBE2CO00762 179 aa8.96□□□□□ -0.98
SHMT2-209ENST00000553949 NMBP08949 121 aa8.96□□□□□ -0.98
SHMT2-209ENST00000553949 BCL2P10415 239 aa8.96□□□□□ -0.98
SHMT2-209ENST00000553949 TMEM78Q5T7P6 136 aa8.96□□□□□ -0.98
SHMT2-209ENST00000553949 ZNF767PQ75MW2 155 aa8.96□□□□□ -0.98
SHMT2-209ENST00000553949 CYB561D1Q8N8Q1 229 aa8.96□□□□□ -0.98
SHMT2-209ENST00000553949 HIST1H2BAQ96A08 127 aa8.96□□□□□ -0.98
SHMT2-209ENST00000553949 LINC00477Q96M19 166 aa8.96□□□□□ -0.98
SHMT2-209ENST00000553949 ODF3Q96PU9 254 aa8.96□□□□□ -0.98
SHMT2-209ENST00000553949 K7EQM0 130 aa8.95□□□□□ -0.98
SHMT2-209ENST00000553949 ZNF138P52744 262 aa8.95□□□□□ -0.98
SHMT2-209ENST00000553949 SPINK13Q1W4C9 94 aa8.95□□□□□ -0.98
SHMT2-209ENST00000553949 Q6ZWC4 215 aa8.95□□□□□ -0.98
SHMT2-209ENST00000553949 Q8TAT8 98 aa8.95□□□□□ -0.98
SHMT2-209ENST00000553949 TXNDC17Q9BRA2 123 aa8.95□□□□□ -0.98
SHMT2-209ENST00000553949 ZNF492Q9P255 531 aa8.95□□□□□ -0.98
SHMT2-209ENST00000553949 XCL2Q9UBD3 114 aa8.95□□□□□ -0.98
SHMT2-209ENST00000553949 TRAV8-1A0A0A6YYK1 113 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 LOC102723971A0A1B0GUV8 181 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 F6UZH7 168 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 M0R2Z0 102 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 TSPOP30536 169 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 TAGLN2P37802 199 aaKnown RBP8.94□□□□□ -0.98
SHMT2-209ENST00000553949 LEPP41159 167 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 CDKN1BP46527 198 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 RAB14P61106 215 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 MEF2BQ02080 365 aaPredicted RBP8.94□□□□□ -0.98
SHMT2-209ENST00000553949 FAM19A4Q96LR4 140 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 SGK494Q96LW2 274 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 LINC00479Q96M42 142 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 RARRES2Q99969 163 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 TM2D3Q9BRN9 247 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 C1QTNF4Q9BXJ3 329 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 VAX2Q9UIW0 290 aa8.94□□□□□ -0.98
SHMT2-209ENST00000553949 AGRNO00468 2067 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 TRAV12-2A0A075B6T6 113 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 TRAV34A0A0B4J273 112 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 TRBV7-9A0A0J9YWB2 115 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 SCO2A0A1W2PP80 73 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 RBFOX3A6NFN3 312 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 FBLL1A6NHQ2 334 aaKnown RBP8.93□□□□□ -0.98
SHMT2-209ENST00000553949 CRXO43186 299 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-209ENST00000553949 IGLV2-11P01706 119 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 AMBPP02760 352 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 CRISP2P16562 243 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 DEFB135Q30KP9 77 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 TMEM75Q8N9X5 138 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 CSNK1G2-AS1Q8NCQ2 148 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 RCHY1Q96PM5 261 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 SPATA25Q9BR10 227 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 PSG8Q9UQ74 426 aa8.93□□□□□ -0.98
SHMT2-209ENST00000553949 J3KRW8 73 aa8.92□□□□□ -0.98
SHMT2-209ENST00000553949 PDE6DO43924 150 aa8.92□□□□□ -0.98
SHMT2-209ENST00000553949 AKR1C3P42330 323 aa8.92□□□□□ -0.98
SHMT2-209ENST00000553949 FLI1Q01543 452 aaPredicted RBP8.92□□□□□ -0.98
SHMT2-209ENST00000553949 KIR3DS1Q14943 382 aa8.92□□□□□ -0.98
SHMT2-209ENST00000553949 ZNF506Q5JVG8 444 aa8.92□□□□□ -0.98
SHMT2-209ENST00000553949 PRNTQ86SH4 94 aa8.92□□□□□ -0.98
SHMT2-209ENST00000553949 C11orf52Q96A22 123 aa8.92□□□□□ -0.98
SHMT2-209ENST00000553949 RNF183Q96D59 192 aa8.92□□□□□ -0.98
SHMT2-209ENST00000553949 IGF2BP2-AS1Q96M15 143 aa8.92□□□□□ -0.98
SHMT2-209ENST00000553949 RETNQ9HD89 108 aa8.92□□□□□ -0.98
SHMT2-209ENST00000553949 KLF12Q9Y4X4 402 aa8.92□□□□□ -0.98
SHMT2-209ENST00000553949 LENEPQ9Y5L5 61 aa8.92□□□□□ -0.98
SHMT2-209ENST00000553949 KLLNB2CW77 178 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 SPRY2O43597 315 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 INSP01308 110 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 NHLRC4P0CG21 123 aaPredicted RBP8.91□□□□□ -0.98
SHMT2-209ENST00000553949 TMEM183BQ1AE95 376 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 TOR2AQ5JU69 321 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 CLLU1Q5K131 121 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 GFI1BQ5VTD9 330 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 ZFAND2AQ8N6M9 145 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 C2CD4CQ8TF44 421 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 TVP23CQ96ET8 276 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 FMC1Q96HJ9 113 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 FAM210AQ96ND0 272 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 OVOL2Q9BRP0 275 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 EIF5A2Q9GZV4 153 aaKnown RBP8.91□□□□□ -0.98
SHMT2-209ENST00000553949 ZMAT4Q9H898 229 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 TP53TG1Q9Y2A0 90 aa8.91□□□□□ -0.98
SHMT2-209ENST00000553949 TRBV6-1A0A0K0K1D8 114 aa8.9□□□□□ -0.98
SHMT2-209ENST00000553949 S100A9P06702 114 aaKnown RBP8.9□□□□□ -0.98
SHMT2-209ENST00000553949 GPX1P07203 203 aa8.9□□□□□ -0.98
SHMT2-209ENST00000553949 RNASE4P34096 147 aaKnown RBP8.9□□□□□ -0.98
SHMT2-209ENST00000553949 UBE2G1P62253 170 aa8.9□□□□□ -0.98
SHMT2-209ENST00000553949 PRR9Q5T870 116 aa8.9□□□□□ -0.98
SHMT2-209ENST00000553949 Q86TA4 180 aa8.9□□□□□ -0.98
SHMT2-209ENST00000553949 NDFIP1Q9BT67 221 aa8.9□□□□□ -0.98
SHMT2-209ENST00000553949 TREM1Q9NP99 234 aa8.9□□□□□ -0.98
SHMT2-209ENST00000553949 GOLT1BQ9Y3E0 138 aa8.9□□□□□ -0.98
SHMT2-209ENST00000553949 TRAV12-3A0A0B4J271 114 aa8.89□□□□□ -0.99
SHMT2-209ENST00000553949 C7orf71A4D174 169 aa8.89□□□□□ -0.99
SHMT2-209ENST00000553949 RGS13O14921 159 aa8.89□□□□□ -0.99
SHMT2-209ENST00000553949 RBMY1A1P0DJD3 496 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 182.1 ms