RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 PTTG2Q9NZH5 202 aa4.58□□□□□ -1.68
FOXN3-205ENST00000553904 TRAV26-1A0A087WT03 109 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 NBDYA0A0U1RRE5 68 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 A0A1W2PPV4 95 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 RBAKDNA6NC62 111 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 A6NHS1 94 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 KLLNB2CW77 178 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 M0R3E3 92 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 RTL8CO15255 209 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 OR7C2O60412 319 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 ZNF324O75467 553 aaPredicted RBP4.57□□□□□ -1.68
FOXN3-205ENST00000553904 SIX6O95475 246 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 CRISP2P16562 243 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 RPL12P30050 165 aaKnown RBP4.57□□□□□ -1.68
FOXN3-205ENST00000553904 ZNF138P52744 262 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 RANP62826 216 aaKnown RBP4.57□□□□□ -1.68
FOXN3-205ENST00000553904 ERCC8Q13216 396 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 IBA57Q5T440 356 aaKnown RBP4.57□□□□□ -1.68
FOXN3-205ENST00000553904 FAM122CQ6P4D5 195 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 EXOC3-AS1Q8N2X6 119 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 C6orf223Q8N319 242 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 ARL6IP6Q8N6S5 226 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 LINC00612Q8N6U2 182 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 CMTM2Q8TAZ6 248 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 THAP6Q8TBB0 222 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 ATP5SQ99766 215 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 ARPC5LQ9BPX5 153 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 ZNF492Q9P255 531 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 FUT9Q9Y231 359 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 LENEPQ9Y5L5 61 aa4.57□□□□□ -1.68
FOXN3-205ENST00000553904 TRAV9-2A0A087WT02 112 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 TRGV1A0A0A0MS02 117 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 A0A1B0GVY2 172 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 A0A1W2PPQ1 181 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 NDUFB4O95168 129 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 MPC2O95563 127 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 OR10J4P0C629 311 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 PYYP10082 97 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 KIR3DS1Q14943 382 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 ACOT6Q3I5F7 207 aaPredicted RBP4.56□□□□□ -1.68
FOXN3-205ENST00000553904 KHDC3LQ587J8 217 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 FFAR4Q5NUL3 377 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 FAM159AQ6UWV7 190 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 MIR17HGQ75NE6 70 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 ZNRF2Q8NHG8 242 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 FAM19A4Q96LR4 140 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 SLC25A2Q9BXI2 301 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 PARD6GQ9BYG4 376 aaPredicted RBP4.56□□□□□ -1.68
FOXN3-205ENST00000553904 GSN-AS1Q9NRJ2 163 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 OR5AC2Q9NZP5 309 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 LINC00588Q9Y4M8 146 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 HSPB11Q9Y547 144 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 RYR3Q15413 4870 aa4.56□□□□□ -1.68
FOXN3-205ENST00000553904 DNAH7Q8WXX0 4024 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 IGHV1OR15-1A0A075B7D0 117 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 A0A0J9YY99 117 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 PAX4O43316 350 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 PRB4P10163 310 aaPredicted RBP4.55□□□□□ -1.68
FOXN3-205ENST00000553904 TCL1AP56279 114 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 H2BFSP57053 126 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 CD300CQ08708 224 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 ZNF415Q09FC8 603 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 GCSAMLQ5JQS6 135 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 PQLC2Q6ZP29 291 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 FXYD5Q96DB9 178 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 FAM167A-AS1Q96KT0 104 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 SPXQ9BT56 116 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 UPK3BQ9BT76 320 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 MBD2Q9UBB5 411 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 PRO0255Q9UI72 69 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 HHLA3Q9XRX5 114 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 BOLA1Q9Y3E2 137 aa4.55□□□□□ -1.68
FOXN3-205ENST00000553904 TRGV11A0A075B6L2 103 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 IGKV2-40A0A087WW87 121 aaPredicted RBP4.54□□□□□ -1.68
FOXN3-205ENST00000553904 SERTM2A0A1B0GWG4 89 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 PGPA6NDG6 321 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 H0YIZ8 118 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 K7EP13 123 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 K7EQM0 130 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 SPINK4O60575 86 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 IGKV2D-40P01614 121 aaPredicted RBP4.54□□□□□ -1.68
FOXN3-205ENST00000553904 MBP02144 154 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 UBE2L3P68036 154 aaKnown RBP4.54□□□□□ -1.68
FOXN3-205ENST00000553904 IFITM3Q01628 133 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 BTN1A1Q13410 526 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 ZNF266Q14584 549 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 MRPL23Q16540 153 aaKnown RBP4.54□□□□□ -1.68
FOXN3-205ENST00000553904 ESRGQ1W209 222 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 Q6ZTI0 123 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 ZFAND2AQ8N6M9 145 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 TMED6Q8WW62 240 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 ST6GAL2Q96JF0 529 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 HYLS1Q96M11 299 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 VGLL1Q99990 258 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 Q9H3A6 140 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 MRPS16Q9Y3D3 137 aaKnown RBP4.54□□□□□ -1.68
FOXN3-205ENST00000553904 KLF12Q9Y4X4 402 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 ICOSQ9Y6W8 199 aa4.54□□□□□ -1.68
FOXN3-205ENST00000553904 TRGV4A0A0C4DH28 118 aa4.53□□□□□ -1.68
FOXN3-205ENST00000553904 DIRC3C9JPN6 131 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms