RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 CCDC160A6NGH7 325 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 TAAR5O14804 337 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 PHOX2AO14813 284 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 PFDN1O60925 122 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 NOL3O60936 208 aaKnown RBP3.67□□□□□ -1.82
ATXN3-223ENST00000553686 PITX3O75364 302 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 PGLYRP1O75594 196 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-223ENST00000553686 RNASE2P10153 161 aaKnown RBP3.67□□□□□ -1.82
ATXN3-223ENST00000553686 TMBIM6P55061 237 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 FXYD4P59646 89 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 RPS25P62851 125 aaKnown RBP3.67□□□□□ -1.82
ATXN3-223ENST00000553686 HIST1H1AQ02539 215 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-223ENST00000553686 LBHQ53QV2 105 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-223ENST00000553686 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 STEAP1BQ6NZ63 245 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 PRSS54Q6PEW0 395 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 DHRSXQ8N5I4 330 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 ZNF738Q8NE65 137 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 ZNF680Q8NEM1 530 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 DPH3Q96FX2 82 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 TMEM80Q96HE8 168 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 RSG1Q9BU20 258 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 JPT2Q9H910 190 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 VAX2Q9UIW0 290 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 BLOC1S6Q9UL45 172 aa3.67□□□□□ -1.82
ATXN3-223ENST00000553686 TRGV4A0A0C4DH28 118 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 EFCAB10A6NFE3 127 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 A8MU10 97 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 SNRPGP15A8MWD9 76 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 EI24O14681 340 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 CCNKO75909 580 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 IGHV3-53P01767 116 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 IGHV3-30P01768 117 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 IGHV3-33P01772 117 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 RLN1P04808 185 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 FABP1P07148 127 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 UCHL1P09936 223 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 IGHV3-30-3P0DP02 117 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 IGHV3-30-5P0DP03 117 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 S100GP29377 79 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 S100A7P31151 101 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 PPT1P50897 306 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 NDUFV3P56181 108 aaKnown RBP3.66□□□□□ -1.82
ATXN3-223ENST00000553686 GABARAPL2P60520 117 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 INSL4Q14641 139 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 SPINK9Q5DT21 86 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 OR10J3Q5JRS4 329 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 TMEM17Q86X19 198 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 OR8A1Q8NGG7 326 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 RNASEH2CQ8TDP1 164 aaKnown RBP3.66□□□□□ -1.82
ATXN3-223ENST00000553686 C7orf33Q8WU49 177 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 RAB2BQ8WUD1 216 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 GPR82Q96P67 336 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 DIABLOQ9NR28 239 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 AK6Q9Y3D8 172 aaKnown RBP3.66□□□□□ -1.82
ATXN3-223ENST00000553686 V9GY05 133 aa3.66□□□□□ -1.82
ATXN3-223ENST00000553686 C5orf52A6NGY3 159 aa3.65□□□□□ -1.83
ATXN3-223ENST00000553686 ARL6IP5O75915 188 aa3.65□□□□□ -1.83
ATXN3-223ENST00000553686 HTR2BP41595 481 aa3.65□□□□□ -1.83
ATXN3-223ENST00000553686 GNG2P59768 71 aa3.65□□□□□ -1.83
ATXN3-223ENST00000553686 ZNF846Q147U1 533 aa3.65□□□□□ -1.83
ATXN3-223ENST00000553686 SPINK6Q6UWN8 80 aa3.65□□□□□ -1.83
ATXN3-223ENST00000553686 TMEM182Q6ZP80 229 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-223ENST00000553686 NRARPQ7Z6K4 114 aa3.65□□□□□ -1.83
ATXN3-223ENST00000553686 IQCF2Q8IXL9 164 aa3.65□□□□□ -1.83
ATXN3-223ENST00000553686 BEST4Q8NFU0 473 aa3.65□□□□□ -1.83
ATXN3-223ENST00000553686 OR4D5Q8NGN0 318 aa3.65□□□□□ -1.83
ATXN3-223ENST00000553686 OR1B1Q8NGR6 318 aa3.65□□□□□ -1.83
ATXN3-223ENST00000553686 S100ZQ8WXG8 99 aa3.65□□□□□ -1.83
ATXN3-223ENST00000553686 SEC22AQ96IW7 307 aa3.65□□□□□ -1.83
ATXN3-223ENST00000553686 ATG5Q9H1Y0 275 aa3.65□□□□□ -1.83
ATXN3-223ENST00000553686 A4D1N5 150 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 GGTLC3B5MD39 225 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 MYL12BO14950 172 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 SPINK4O60575 86 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 SCGNO76038 276 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 PFN1P07737 140 aaKnown RBP3.64□□□□□ -1.83
ATXN3-223ENST00000553686 SEC11BP0C7V7 166 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 LYZP61626 148 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 FGL1Q08830 312 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 PRR4Q16378 134 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 DHRS11Q6UWP2 260 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 CLVS1Q8IUQ0 354 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-223ENST00000553686 ZNF555Q8NEP9 628 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 LRRC20Q8TCA0 184 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 CYGBQ8WWM9 190 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 ZC2HC1AQ96GY0 325 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 ACY3Q96HD9 319 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 SH3BGRL3Q9H299 93 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 TMEM56-RWDD3S4R434 201 aa3.64□□□□□ -1.83
ATXN3-223ENST00000553686 TRAV26-2A0A0B4J265 109 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 LOC100130705A0A1B0GUX0 176 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 FAM231BA6NCW3 169 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 ZFP92A6NM28 416 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 GPR31O00270 319 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 ATG12O94817 140 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 CFDP00746 253 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-223ENST00000553686 KRTAP1-4P0C5Y4 121 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 BSXQ3C1V8 233 aa3.63□□□□□ -1.83
ATXN3-223ENST00000553686 C2orf83Q53S99 150 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms