RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 PPP1R1CQ8WVI7 109 aa3.43□□□□□ -1.86
ATXN3-222ENST00000553570 ZNF414Q96IQ9 312 aa3.43□□□□□ -1.86
ATXN3-222ENST00000553570 SCRT1Q9BWW7 348 aa3.43□□□□□ -1.86
ATXN3-222ENST00000553570 UQCC1Q9NVA1 299 aa3.43□□□□□ -1.86
ATXN3-222ENST00000553570 NBEAL2Q6ZNJ1 2754 aa3.43□□□□□ -1.86
ATXN3-222ENST00000553570 COL7A1Q02388 2944 aa3.43□□□□□ -1.86
ATXN3-222ENST00000553570 IGHV3OR16-12A0A075B7B8 117 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 TRAV5A0A0B4J249 113 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 H3BTX0 84 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 K7EQG2 157 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 MPC2O95563 127 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 CA1P00915 261 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-222ENST00000553570 PET100P0DJ07 73 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 CXCL3P19876 107 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 RPL12P30050 165 aaKnown RBP3.42□□□□□ -1.86
ATXN3-222ENST00000553570 H2BFSP57053 126 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 DEFB1P60022 68 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 RHOBP62745 196 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 EWSR1Q01844 656 aaKnown RBP eCLIP3.42□□□□□ -1.86
ATXN3-222ENST00000553570 ZFAND6Q6FIF0 208 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 EBLN2Q6P2I7 272 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 LINC00305Q7Z4B0 112 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 MGST2Q99735 147 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 RNF126Q9BV68 326 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 GGACTQ9BVM4 153 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 SLC25A39Q9BZJ4 359 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-222ENST00000553570 ARV1Q9H2C2 271 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 NRN1Q9NPD7 142 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 LYRM2Q9NU23 88 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-222ENST00000553570 CLEC5AQ9NY25 188 aa3.42□□□□□ -1.86
ATXN3-222ENST00000553570 FXYD6-FXYD2A0A087WZ82 144 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 FNDC10F2Z333 226 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 C17orf112F2Z3M2 114 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 DEFB4AO15263 64 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 PFDN1O60925 122 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 ZNF705DP0CH99 300 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-222ENST00000553570 ZNF705BP0CI00 300 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-222ENST00000553570 RPL7P18124 248 aaKnown RBP3.41□□□□□ -1.86
ATXN3-222ENST00000553570 B2MP61769 119 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 IL15RAQ13261 267 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 OXA1LQ15070 435 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 ZFP69Q49AA0 526 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 C1orf194Q5T5A4 169 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 PATE2Q6UY27 113 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 ZNF546Q86UE3 836 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 RNF182Q8N6D2 247 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 INO80EQ8NBZ0 244 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-222ENST00000553570 ZNF738Q8NE65 137 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 OR11H7Q8NGC8 314 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 OR1L4Q8NGR5 311 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 OR11H2Q8NH07 326 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 BLNKQ8WV28 456 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 RARRES2Q99969 163 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 TM2D3Q9BRN9 247 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 RPRMQ9NS64 109 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 SLC39A9Q9NUM3 307 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 MBD2Q9UBB5 411 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 XCL2Q9UBD3 114 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 TIMM9Q9Y5J7 89 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 PXMP4Q9Y6I8 212 aa3.41□□□□□ -1.86
ATXN3-222ENST00000553570 TRAV2A0A0B4J234 112 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 A0A1W2PPV4 95 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 ZNF705FA8MVS1 300 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-222ENST00000553570 F6UB75 175 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 SMLR1H3BR10 107 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 MPDU1O75352 247 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 HTN1P15515 57 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 C4BPBP20851 252 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 HLA-DMBP28068 263 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 MEOX2P50222 304 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 EMP1P54849 157 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 NUTF2P61970 127 aaKnown RBP3.4□□□□□ -1.87
ATXN3-222ENST00000553570 FAM78BQ5VT40 261 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 LINC00322Q6ZN03 302 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-222ENST00000553570 BPIFA4PQ86YQ2 179 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 DCANP1Q8TF63 244 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 TMEM37Q8WXS4 190 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 GPR82Q96P67 336 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 PFDN5Q99471 154 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 ATP5SQ99766 215 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 OVOL2Q9BRP0 275 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 SHANK2-AS3Q9BTD1 123 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 TMEM208Q9BTX3 173 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 C11orf1Q9H5F2 150 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 RNF24Q9Y225 148 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 HSPB11Q9Y547 144 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 RFNGQ9Y644 331 aa3.4□□□□□ -1.87
ATXN3-222ENST00000553570 KIR2DL5BA0A0G2JN68 375 aa3.39□□□□□ -1.87
ATXN3-222ENST00000553570 KIR2DL5BA0A0G2JPC4 375 aa3.39□□□□□ -1.87
ATXN3-222ENST00000553570 A0A0J9YWU9 116 aa3.39□□□□□ -1.87
ATXN3-222ENST00000553570 A0A1B0GVG6 124 aa3.39□□□□□ -1.87
ATXN3-222ENST00000553570 H3BRN7 92 aa3.39□□□□□ -1.87
ATXN3-222ENST00000553570 ISLRO14498 428 aa3.39□□□□□ -1.87
ATXN3-222ENST00000553570 HMGB3O15347 200 aaKnown RBP3.39□□□□□ -1.87
ATXN3-222ENST00000553570 OR7C2O60412 319 aa3.39□□□□□ -1.87
ATXN3-222ENST00000553570 EIF3GO75821 320 aaKnown RBP eCLIP3.39□□□□□ -1.87
ATXN3-222ENST00000553570 OR10J4P0C629 311 aa3.39□□□□□ -1.87
ATXN3-222ENST00000553570 RPL29P47914 159 aaKnown RBP3.39□□□□□ -1.87
ATXN3-222ENST00000553570 PSMB3P49720 205 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms