RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 TP53TG3Q9ULZ0 132 aa12.76□□□□□ -0.37
SHMT2-206ENST00000553529 RNASE4P34096 147 aaKnown RBP12.75□□□□□ -0.37
SHMT2-206ENST00000553529 LEPP41159 167 aa12.75□□□□□ -0.37
SHMT2-206ENST00000553529 CYCSP99999 105 aaKnown RBP12.75□□□□□ -0.37
SHMT2-206ENST00000553529 RNF141Q8WVD5 230 aa12.75□□□□□ -0.37
SHMT2-206ENST00000553529 PAXXQ9BUH6 204 aa12.75□□□□□ -0.37
SHMT2-206ENST00000553529 FUT9Q9Y231 359 aa12.75□□□□□ -0.37
SHMT2-206ENST00000553529 TIMM8BQ9Y5J9 83 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-206ENST00000553529 A0A0J9YY99 117 aa12.74□□□□□ -0.37
SHMT2-206ENST00000553529 A0A1B0GVY2 172 aa12.74□□□□□ -0.37
SHMT2-206ENST00000553529 HMGB3O15347 200 aaKnown RBP12.74□□□□□ -0.37
SHMT2-206ENST00000553529 NBEAP1P0C6P0 100 aa12.74□□□□□ -0.37
SHMT2-206ENST00000553529 Q6ZTI0 123 aa12.74□□□□□ -0.37
SHMT2-206ENST00000553529 ZFAND2AQ8N6M9 145 aa12.74□□□□□ -0.37
SHMT2-206ENST00000553529 MRPL53Q96EL3 112 aaKnown RBP12.74□□□□□ -0.37
SHMT2-206ENST00000553529 GSN-AS1Q9NRJ2 163 aa12.74□□□□□ -0.37
SHMT2-206ENST00000553529 C7orf71A4D174 169 aa12.73□□□□□ -0.37
SHMT2-206ENST00000553529 KLLNB2CW77 178 aa12.73□□□□□ -0.37
SHMT2-206ENST00000553529 OR7C2O60412 319 aa12.73□□□□□ -0.37
SHMT2-206ENST00000553529 ZNF324O75467 553 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-206ENST00000553529 ATP5G1P05496 136 aa12.73□□□□□ -0.37
SHMT2-206ENST00000553529 ATP5G3P48201 142 aa12.73□□□□□ -0.37
SHMT2-206ENST00000553529 RAB2AP61019 212 aa12.73□□□□□ -0.37
SHMT2-206ENST00000553529 Q6ZR54 194 aa12.73□□□□□ -0.37
SHMT2-206ENST00000553529 LINC00612Q8N6U2 182 aa12.73□□□□□ -0.37
SHMT2-206ENST00000553529 C11orf72Q8NBR9 251 aa12.73□□□□□ -0.37
SHMT2-206ENST00000553529 ODF3Q96PU9 254 aa12.73□□□□□ -0.37
SHMT2-206ENST00000553529 TMPRSS5Q9H3S3 457 aa12.73□□□□□ -0.37
SHMT2-206ENST00000553529 HERC2O95714 4834 aa12.73□□□□□ -0.37
SHMT2-206ENST00000553529 KIAA1109Q2LD37 5005 aa12.73□□□□□ -0.37
SHMT2-206ENST00000553529 CBY3A6NI87 242 aa12.72□□□□□ -0.37
SHMT2-206ENST00000553529 RANP62826 216 aaKnown RBP12.72□□□□□ -0.37
SHMT2-206ENST00000553529 PDE6HQ13956 83 aa12.72□□□□□ -0.37
SHMT2-206ENST00000553529 FAM210BQ96KR6 192 aa12.72□□□□□ -0.37
SHMT2-206ENST00000553529 MRPL32Q9BYC8 188 aaKnown RBP12.72□□□□□ -0.37
SHMT2-206ENST00000553529 KLF12Q9Y4X4 402 aa12.72□□□□□ -0.37
SHMT2-206ENST00000553529 DYNC1H1Q14204 4646 aaKnown RBP12.71□□□□□ -0.37
SHMT2-206ENST00000553529 UBE2L3P68036 154 aaKnown RBP12.71□□□□□ -0.37
SHMT2-206ENST00000553529 OR5I1Q13606 314 aa12.71□□□□□ -0.37
SHMT2-206ENST00000553529 C9orf47Q6ZRZ4 202 aa12.71□□□□□ -0.37
SHMT2-206ENST00000553529 C20orf144Q9BQM9 153 aa12.71□□□□□ -0.37
SHMT2-206ENST00000553529 Q9H3A6 140 aa12.71□□□□□ -0.37
SHMT2-206ENST00000553529 PKD1P98161 4303 aa12.71□□□□□ -0.37
SHMT2-206ENST00000553529 TRAV26-1A0A087WT03 109 aa12.7□□□□□ -0.38
SHMT2-206ENST00000553529 C17orf112F2Z3M2 114 aa12.7□□□□□ -0.38
SHMT2-206ENST00000553529 SLC25A5P05141 298 aaKnown RBP12.7□□□□□ -0.38
SHMT2-206ENST00000553529 ZNF493Q6ZR52 646 aa12.7□□□□□ -0.38
SHMT2-206ENST00000553529 AAMDCQ9H7C9 122 aa12.7□□□□□ -0.38
SHMT2-206ENST00000553529 RPH3ALQ9UNE2 315 aa12.7□□□□□ -0.38
SHMT2-206ENST00000553529 LINC00588Q9Y4M8 146 aa12.7□□□□□ -0.38
SHMT2-206ENST00000553529 PRSS29PA6NIE9 313 aa12.69□□□□□ -0.38
SHMT2-206ENST00000553529 CCDC28AQ8IWP9 274 aa12.69□□□□□ -0.38
SHMT2-206ENST00000553529 HYLS1Q96M11 299 aa12.69□□□□□ -0.38
SHMT2-206ENST00000553529 ZNF492Q9P255 531 aa12.69□□□□□ -0.38
SHMT2-206ENST00000553529 PRELID1Q9Y255 219 aa12.69□□□□□ -0.38
SHMT2-206ENST00000553529 SNURFLB1AK76 121 aa12.68□□□□□ -0.38
SHMT2-206ENST00000553529 GPX1P07203 203 aa12.68□□□□□ -0.38
SHMT2-206ENST00000553529 CRISP2P16562 243 aa12.68□□□□□ -0.38
SHMT2-206ENST00000553529 GNG5P63218 68 aa12.68□□□□□ -0.38
SHMT2-206ENST00000553529 LGALS9BQ3B8N2 356 aa12.68□□□□□ -0.38
SHMT2-206ENST00000553529 MUC21Q5SSG8 566 aa12.68□□□□□ -0.38
SHMT2-206ENST00000553529 C15orf53Q8NAA6 179 aa12.68□□□□□ -0.38
SHMT2-206ENST00000553529 ZNRF2Q8NHG8 242 aa12.68□□□□□ -0.38
SHMT2-206ENST00000553529 SCGB1C1Q8TD33 95 aa12.68□□□□□ -0.38
SHMT2-206ENST00000553529 LINC00477Q96M19 166 aa12.68□□□□□ -0.38
SHMT2-206ENST00000553529 PYGO2Q9BRQ0 406 aa12.68□□□□□ -0.38
SHMT2-206ENST00000553529 MRPL16Q9NX20 251 aaKnown RBP12.68□□□□□ -0.38
SHMT2-206ENST00000553529 IFNA5P01569 189 aa12.67□□□□□ -0.38
SHMT2-206ENST00000553529 PET100P0DJ07 73 aa12.67□□□□□ -0.38
SHMT2-206ENST00000553529 RGS21Q2M5E4 152 aa12.67□□□□□ -0.38
SHMT2-206ENST00000553529 RNF212Q495C1 297 aa12.67□□□□□ -0.38
SHMT2-206ENST00000553529 HSD17B11Q8NBQ5 300 aa12.67□□□□□ -0.38
SHMT2-206ENST00000553529 KCNIP2Q9NS61 270 aa12.67□□□□□ -0.38
SHMT2-206ENST00000553529 PKHD1P08F94 4074 aa12.67□□□□□ -0.38
SHMT2-206ENST00000553529 IGHV3-53P01767 116 aa12.66□□□□□ -0.38
SHMT2-206ENST00000553529 TMEM78Q5T7P6 136 aa12.66□□□□□ -0.38
SHMT2-206ENST00000553529 SSX7Q7RTT5 188 aa12.66□□□□□ -0.38
SHMT2-206ENST00000553529 SGK494Q96LW2 274 aa12.66□□□□□ -0.38
SHMT2-206ENST00000553529 ATG101Q9BSB4 218 aa12.66□□□□□ -0.38
SHMT2-206ENST00000553529 KRTAP1-5Q9BYS1 174 aa12.66□□□□□ -0.38
SHMT2-206ENST00000553529 SH3BGRL3Q9H299 93 aa12.66□□□□□ -0.38
SHMT2-206ENST00000553529 TRGV1A0A0A0MS02 117 aa12.65□□□□□ -0.38
SHMT2-206ENST00000553529 TRAV8-1A0A0A6YYK1 113 aa12.65□□□□□ -0.38
SHMT2-206ENST00000553529 DIRC3C9JPN6 131 aa12.65□□□□□ -0.38
SHMT2-206ENST00000553529 PTTG1O95997 202 aa12.65□□□□□ -0.38
SHMT2-206ENST00000553529 ZNF138P52744 262 aa12.65□□□□□ -0.38
SHMT2-206ENST00000553529 KHDC3LQ587J8 217 aa12.65□□□□□ -0.38
SHMT2-206ENST00000553529 EIF4E3Q8N5X7 224 aaKnown RBP12.65□□□□□ -0.38
SHMT2-206ENST00000553529 VSIG2Q96IQ7 327 aa12.65□□□□□ -0.38
SHMT2-206ENST00000553529 DAZ2Q13117 558 aaKnown RBP12.64□□□□□ -0.39
SHMT2-206ENST00000553529 GNPNAT1Q96EK6 184 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-206ENST00000553529 TVP23CQ96ET8 276 aa12.64□□□□□ -0.39
SHMT2-206ENST00000553529 KRTAP17-1Q9BYP8 105 aa12.64□□□□□ -0.39
SHMT2-206ENST00000553529 MED28Q9H204 178 aa12.64□□□□□ -0.39
SHMT2-206ENST00000553529 MDFICQ9P1T7 246 aa12.64□□□□□ -0.39
SHMT2-206ENST00000553529 DNAH11Q96DT5 4516 aa12.63□□□□□ -0.39
SHMT2-206ENST00000553529 IGHV1OR15-1A0A075B7D0 117 aa12.63□□□□□ -0.39
SHMT2-206ENST00000553529 PGPA6NDG6 321 aa12.63□□□□□ -0.39
SHMT2-206ENST00000553529 F6UZH7 168 aa12.63□□□□□ -0.39
SHMT2-206ENST00000553529 RGS13O14921 159 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms