RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 SUN5Q8TC36 379 aa17.01■□□□□ 0.31
TDP1-205ENST00000553527 SFT2D1Q8WV19 159 aa17.01■□□□□ 0.31
TDP1-205ENST00000553527 GOLT1BQ9Y3E0 138 aa17.01■□□□□ 0.31
TDP1-205ENST00000553527 M0R2Z0 102 aa17■□□□□ 0.31
TDP1-205ENST00000553527 M0R3E3 92 aa17■□□□□ 0.31
TDP1-205ENST00000553527 H2AFB1P0C5Y9 115 aa17■□□□□ 0.31
TDP1-205ENST00000553527 AMTNQ6UX39 209 aa17■□□□□ 0.31
TDP1-205ENST00000553527 ZNF767PQ75MW2 155 aa17■□□□□ 0.31
TDP1-205ENST00000553527 OR8A1Q8NGG7 326 aa17■□□□□ 0.31
TDP1-205ENST00000553527 MBD3L1Q8WWY6 194 aa17■□□□□ 0.31
TDP1-205ENST00000553527 PPP1R14DQ9NXH3 145 aa17■□□□□ 0.31
TDP1-205ENST00000553527 A0A1B0GV50 99 aa16.99■□□□□ 0.31
TDP1-205ENST00000553527 LY6G6CO95867 125 aa16.99■□□□□ 0.31
TDP1-205ENST00000553527 C1orf158Q8N1D5 194 aa16.99■□□□□ 0.31
TDP1-205ENST00000553527 TMEM208Q9BTX3 173 aa16.99■□□□□ 0.31
TDP1-205ENST00000553527 TMPRSS5Q9H3S3 457 aa16.99■□□□□ 0.31
TDP1-205ENST00000553527 OTORQ9NRC9 128 aa16.99■□□□□ 0.31
TDP1-205ENST00000553527 CELA1Q9UNI1 258 aa16.99■□□□□ 0.31
TDP1-205ENST00000553527 PLECQ15149 4684 aaKnown RBP16.98■□□□□ 0.31
TDP1-205ENST00000553527 OR10J6PQ8NGY7 276 aa16.98■□□□□ 0.31
TDP1-205ENST00000553527 RYR2Q92736 4967 aa16.97■□□□□ 0.31
TDP1-205ENST00000553527 A8MTW9 85 aa16.97■□□□□ 0.31
TDP1-205ENST00000553527 PRAC2D3DTV9 90 aa16.97■□□□□ 0.31
TDP1-205ENST00000553527 CSN1S1P47710 185 aa16.97■□□□□ 0.31
TDP1-205ENST00000553527 Q6ZTC4 211 aa16.97■□□□□ 0.31
TDP1-205ENST00000553527 NEU1Q99519 415 aa16.97■□□□□ 0.31
TDP1-205ENST00000553527 TRAV12-2A0A075B6T6 113 aa16.96■□□□□ 0.31
TDP1-205ENST00000553527 SMIM9A6NGZ8 99 aa16.96■□□□□ 0.31
TDP1-205ENST00000553527 CMTM2Q8TAZ6 248 aa16.96■□□□□ 0.31
TDP1-205ENST00000553527 C2CD4CQ8TF44 421 aa16.96■□□□□ 0.31
TDP1-205ENST00000553527 LINC00476Q8WZB0 136 aa16.96■□□□□ 0.31
TDP1-205ENST00000553527 IGF2BP2-AS1Q96M15 143 aa16.96■□□□□ 0.31
TDP1-205ENST00000553527 PGPA6NDG6 321 aa16.95■□□□□ 0.3
TDP1-205ENST00000553527 TEX46H3BTG2 121 aa16.95■□□□□ 0.3
TDP1-205ENST00000553527 HBE1P02100 147 aa16.95■□□□□ 0.3
TDP1-205ENST00000553527 UBE2G2P60604 165 aa16.95■□□□□ 0.3
TDP1-205ENST00000553527 RXFP4Q8TDU9 374 aa16.95■□□□□ 0.3
TDP1-205ENST00000553527 A0A1W2PRE2 83 aa16.94■□□□□ 0.3
TDP1-205ENST00000553527 IGLL5B9A064 214 aa16.94■□□□□ 0.3
TDP1-205ENST00000553527 AMBPP02760 352 aa16.94■□□□□ 0.3
TDP1-205ENST00000553527 PRM2P04554 102 aa16.94■□□□□ 0.3
TDP1-205ENST00000553527 C12orf74Q32Q52 190 aa16.94■□□□□ 0.3
TDP1-205ENST00000553527 RPH3ALQ9UNE2 315 aa16.94■□□□□ 0.3
TDP1-205ENST00000553527 IGKV2-40A0A087WW87 121 aaPredicted RBP16.93■□□□□ 0.3
TDP1-205ENST00000553527 C11orf94C9JXX5 98 aa16.93■□□□□ 0.3
TDP1-205ENST00000553527 CRXO43186 299 aaPredicted RBP16.93■□□□□ 0.3
TDP1-205ENST00000553527 INSP01308 110 aa16.93■□□□□ 0.3
TDP1-205ENST00000553527 IGKV2D-40P01614 121 aaPredicted RBP16.93■□□□□ 0.3
TDP1-205ENST00000553527 SLC25A5P05141 298 aaKnown RBP16.93■□□□□ 0.3
TDP1-205ENST00000553527 RRN3P1Q2M238 152 aa16.93■□□□□ 0.3
TDP1-205ENST00000553527 YTHDF2Q9Y5A9 579 aaKnown RBP16.93■□□□□ 0.3
TDP1-205ENST00000553527 HYDINQ4G0P3 5121 aa16.92■□□□□ 0.3
TDP1-205ENST00000553527 TRAV1-1A0A0B4J248 108 aa16.92■□□□□ 0.3
TDP1-205ENST00000553527 LOC102723971A0A1B0GUV8 181 aa16.92■□□□□ 0.3
TDP1-205ENST00000553527 GGTLC3B5MD39 225 aa16.92■□□□□ 0.3
TDP1-205ENST00000553527 NPIPB6E9PJ23 425 aa16.92■□□□□ 0.3
TDP1-205ENST00000553527 SPART-AS1P0CW21 52 aa16.92■□□□□ 0.3
TDP1-205ENST00000553527 TRAV10A0A0B4J240 114 aa16.91■□□□□ 0.3
TDP1-205ENST00000553527 TMEM189A5PLL7 270 aa16.91■□□□□ 0.3
TDP1-205ENST00000553527 FAM74A7A6NL05 159 aa16.91■□□□□ 0.3
TDP1-205ENST00000553527 ZNF705GA8MUZ8 300 aaPredicted RBP16.91■□□□□ 0.3
TDP1-205ENST00000553527 PPT1P50897 306 aa16.91■□□□□ 0.3
TDP1-205ENST00000553527 C5orf17Q8NAS9 161 aa16.91■□□□□ 0.3
TDP1-205ENST00000553527 ARL2-SNX15V9GYD0 113 aa16.91■□□□□ 0.3
TDP1-205ENST00000553527 DIRC3C9JPN6 131 aa16.9■□□□□ 0.3
TDP1-205ENST00000553527 SUMO1P63165 101 aaKnown RBP16.9■□□□□ 0.3
TDP1-205ENST00000553527 GNG5P63218 68 aa16.9■□□□□ 0.3
TDP1-205ENST00000553527 BLOC1S1P78537 153 aa16.9■□□□□ 0.3
TDP1-205ENST00000553527 TEX261Q6UWH6 196 aa16.9■□□□□ 0.3
TDP1-205ENST00000553527 ARL6IP6Q8N6S5 226 aa16.9■□□□□ 0.3
TDP1-205ENST00000553527 NKX6-2Q9C056 277 aaPredicted RBP16.9■□□□□ 0.3
TDP1-205ENST00000553527 ALMS1Q8TCU4 4167 aa16.9■□□□□ 0.3
TDP1-205ENST00000553527 HTN1P15515 57 aa16.89■□□□□ 0.29
TDP1-205ENST00000553527 ERCC8Q13216 396 aa16.89■□□□□ 0.29
TDP1-205ENST00000553527 TMEM78Q5T7P6 136 aa16.89■□□□□ 0.29
TDP1-205ENST00000553527 FAM222AQ5U5X8 452 aa16.89■□□□□ 0.29
TDP1-205ENST00000553527 CST9LP1Q5W188 147 aa16.89■□□□□ 0.29
TDP1-205ENST00000553527 LINC01587Q99440 93 aa16.89■□□□□ 0.29
TDP1-205ENST00000553527 DNAH1Q9P2D7 4330 aa16.88■□□□□ 0.29
TDP1-205ENST00000553527 DEFB131BA0A096LNP1 70 aa16.88■□□□□ 0.29
TDP1-205ENST00000553527 RBAKDNA6NC62 111 aa16.88■□□□□ 0.29
TDP1-205ENST00000553527 PAGE4O60829 102 aa16.88■□□□□ 0.29
TDP1-205ENST00000553527 CCL20P78556 96 aa16.88■□□□□ 0.29
TDP1-205ENST00000553527 GOLT1AQ6ZVE7 132 aa16.88■□□□□ 0.29
TDP1-205ENST00000553527 VGLL1Q99990 258 aa16.88■□□□□ 0.29
TDP1-205ENST00000553527 MANBALQ9NQG1 85 aa16.88■□□□□ 0.29
TDP1-205ENST00000553527 GNG13Q9P2W3 67 aa16.88■□□□□ 0.29
TDP1-205ENST00000553527 J3KRW8 73 aa16.87■□□□□ 0.29
TDP1-205ENST00000553527 IFNA7P01567 189 aa16.87■□□□□ 0.29
TDP1-205ENST00000553527 CDKN1BP46527 198 aa16.87■□□□□ 0.29
TDP1-205ENST00000553527 C9orf47Q6ZRZ4 202 aa16.87■□□□□ 0.29
TDP1-205ENST00000553527 ZNF680Q8NEM1 530 aa16.87■□□□□ 0.29
TDP1-205ENST00000553527 LINC00477Q96M19 166 aa16.87■□□□□ 0.29
TDP1-205ENST00000553527 DKK2Q9UBU2 259 aa16.87■□□□□ 0.29
TDP1-205ENST00000553527 SERTM2A0A1B0GWG4 89 aa16.86■□□□□ 0.29
TDP1-205ENST00000553527 IFNA1P01562 189 aa16.86■□□□□ 0.29
TDP1-205ENST00000553527 TCRAP04437 139 aa16.86■□□□□ 0.29
TDP1-205ENST00000553527 CT45A10P0DMU9 189 aa16.86■□□□□ 0.29
TDP1-205ENST00000553527 KIR3DS1Q14943 382 aa16.86■□□□□ 0.29
TDP1-205ENST00000553527 ODF3Q96PU9 254 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms