RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 Q6ZSA8 131 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 CCDC190Q86UF4 302 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 CLVS1Q8IUQ0 354 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-219ENST00000553488 ZNF431Q8TF32 576 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-219ENST00000553488 AP3S1Q92572 193 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 ST6GAL2Q96JF0 529 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 CIB3Q96Q77 187 aaPredicted RBP4.87□□□□□ -1.63
ATXN3-219ENST00000553488 SLC50A1Q9BRV3 221 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 FUT9Q9Y231 359 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 KCNIP3Q9Y2W7 256 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 LY96Q9Y6Y9 160 aa4.87□□□□□ -1.63
ATXN3-219ENST00000553488 TRGV1A0A0A0MS02 117 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 ANKRD20A5PA0PJZ0 165 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 K7EP13 123 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 K7EPK0 472 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 WRBO00258 174 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 CTDSPLO15194 276 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 SYNGR2O43760 224 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 IL5P05113 134 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 OR5G3P0C626 314 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 IGLC2P0DOY2 106 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 CRYBA4P53673 196 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 TCL1AP56279 114 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
ATXN3-219ENST00000553488 CTF1Q16619 201 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 LRTM2Q8N967 370 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 ZNF680Q8NEM1 530 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 NAA50Q9GZZ1 169 aaKnown RBP4.86□□□□□ -1.63
ATXN3-219ENST00000553488 GSN-AS1Q9NRJ2 163 aa4.86□□□□□ -1.63
ATXN3-219ENST00000553488 A0A087WXM4 84 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 KLLNB2CW77 178 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 H3BTX0 84 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 MED6O75586 246 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 CCNKO75909 580 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 C1QBP02746 253 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 SNRPCP09234 159 aaKnown RBP4.85□□□□□ -1.63
ATXN3-219ENST00000553488 ANXA3P12429 323 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 LEPP41159 167 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 SELENOTP62341 195 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 ANXA2RQ3ZCQ2 193 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 SPANXN5Q5MJ07 72 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 MORN5Q5VZ52 161 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 LRRC20Q8TCA0 184 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 DEFB104AQ8WTQ1 72 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 SAT2Q96F10 170 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-219ENST00000553488 FAM19A4Q96LR4 140 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 VGLL1Q99990 258 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 ARL6Q9H0F7 186 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 ARV1Q9H2C2 271 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 VCX3AQ9NNX9 186 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 PRO0255Q9UI72 69 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 SCP2D1Q9UJQ7 156 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 KLF12Q9Y4X4 402 aa4.85□□□□□ -1.63
ATXN3-219ENST00000553488 TRAV9-2A0A087WT02 112 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 SMCO3A2RU48 225 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 C7orf71A4D174 169 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 H3BQ15 152 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 K7EQD1 137 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 CTDSP2O14595 271 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 IGHV3-53P01767 116 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 TIRAPP58753 221 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 SLC38A11Q08AI6 406 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 BTN1A1Q13410 526 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 MRPL23Q16540 153 aaKnown RBP4.84□□□□□ -1.63
ATXN3-219ENST00000553488 IBA57Q5T440 356 aaKnown RBP4.84□□□□□ -1.63
ATXN3-219ENST00000553488 NEGR1Q7Z3B1 354 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 LINC00305Q7Z4B0 112 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 EIF4E3Q8N5X7 224 aaKnown RBP4.84□□□□□ -1.63
ATXN3-219ENST00000553488 ARL6IP6Q8N6S5 226 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 Q8N814 137 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 SCGB3A2Q96PL1 93 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 MRPL16Q9NX20 251 aaKnown RBP4.84□□□□□ -1.63
ATXN3-219ENST00000553488 RABL2BQ9UNT1 228 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 STRAPQ9Y3F4 350 aaKnown RBP4.84□□□□□ -1.63
ATXN3-219ENST00000553488 PXMP4Q9Y6I8 212 aa4.84□□□□□ -1.63
ATXN3-219ENST00000553488 PIGBOS1A0A0B4J2F0 54 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 FNDC10F2Z333 226 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 PRAF2O60831 178 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 SLC25A5P05141 298 aaKnown RBP4.83□□□□□ -1.64
ATXN3-219ENST00000553488 CRYGDP07320 174 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 EVI2AP22794 236 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 CD300CQ08708 224 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 OPCMLQ14982 345 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 TMEM128Q5BJH2 165 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 PRR9Q5T870 116 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 PXDC1Q5TGL8 231 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 TMEM14EPQ6UXP3 125 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 BPIFA4PQ86YQ2 179 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 C10orf126Q8N4M7 172 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 TMEM37Q8WXS4 190 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 DAZAP1Q96EP5 407 aaKnown RBP4.83□□□□□ -1.64
ATXN3-219ENST00000553488 CTDSP1Q9GZU7 261 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 TP53TG3Q9ULZ0 132 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 HHLA3Q9XRX5 114 aa4.83□□□□□ -1.64
ATXN3-219ENST00000553488 M0R3E3 92 aa4.82□□□□□ -1.64
ATXN3-219ENST00000553488 RGS5O15539 181 aa4.82□□□□□ -1.64
ATXN3-219ENST00000553488 PAGE4O60829 102 aa4.82□□□□□ -1.64
ATXN3-219ENST00000553488 OR4E1P0C645 316 aa4.82□□□□□ -1.64
ATXN3-219ENST00000553488 CRISP2P16562 243 aa4.82□□□□□ -1.64
ATXN3-219ENST00000553488 ANXA7P20073 488 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms