RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 PPP1R14DQ9NXH3 145 aa7.21□□□□□ -1.26
TMEM260-204ENST00000553335 HLA-DRB4X5D2U9 266 aa7.21□□□□□ -1.26
TMEM260-204ENST00000553335 FBLL1A6NHQ2 334 aaKnown RBP7.2□□□□□ -1.26
TMEM260-204ENST00000553335 PRAC2D3DTV9 90 aa7.2□□□□□ -1.26
TMEM260-204ENST00000553335 PEX7O00628 323 aa7.2□□□□□ -1.26
TMEM260-204ENST00000553335 DEFB1P60022 68 aa7.2□□□□□ -1.26
TMEM260-204ENST00000553335 GNG5P63218 68 aa7.2□□□□□ -1.26
TMEM260-204ENST00000553335 DEFA6Q01524 100 aa7.2□□□□□ -1.26
TMEM260-204ENST00000553335 ZNF506Q5JVG8 444 aa7.2□□□□□ -1.26
TMEM260-204ENST00000553335 GDF5OSQ5U4N7 250 aa7.2□□□□□ -1.26
TMEM260-204ENST00000553335 C9orf47Q6ZRZ4 202 aa7.2□□□□□ -1.26
TMEM260-204ENST00000553335 GOLT1AQ6ZVE7 132 aa7.2□□□□□ -1.26
TMEM260-204ENST00000553335 OR4B1Q8NGF8 309 aa7.2□□□□□ -1.26
TMEM260-204ENST00000553335 LINC00477Q96M19 166 aa7.2□□□□□ -1.26
TMEM260-204ENST00000553335 WFDC10AQ9H1F0 79 aa7.2□□□□□ -1.26
TMEM260-204ENST00000553335 DNAH3Q8TD57 4116 aa7.19□□□□□ -1.26
TMEM260-204ENST00000553335 IGKV2-40A0A087WW87 121 aaPredicted RBP7.19□□□□□ -1.26
TMEM260-204ENST00000553335 LOC102724200A0A096LPH7 203 aaPredicted RBP7.19□□□□□ -1.26
TMEM260-204ENST00000553335 A8MZ25 164 aa7.19□□□□□ -1.26
TMEM260-204ENST00000553335 NPIPB6E9PJ23 425 aa7.19□□□□□ -1.26
TMEM260-204ENST00000553335 H3BMM0 161 aa7.19□□□□□ -1.26
TMEM260-204ENST00000553335 NDUFS6O75380 124 aaKnown RBP7.19□□□□□ -1.26
TMEM260-204ENST00000553335 IGKV2D-40P01614 121 aaPredicted RBP7.19□□□□□ -1.26
TMEM260-204ENST00000553335 S100A9P06702 114 aaKnown RBP7.19□□□□□ -1.26
TMEM260-204ENST00000553335 ZNF705DP0CH99 300 aaPredicted RBP7.19□□□□□ -1.26
TMEM260-204ENST00000553335 ZNF705BP0CI00 300 aaPredicted RBP7.19□□□□□ -1.26
TMEM260-204ENST00000553335 AKR1C3P42330 323 aa7.19□□□□□ -1.26
TMEM260-204ENST00000553335 CNN1P51911 297 aaKnown RBP7.19□□□□□ -1.26
TMEM260-204ENST00000553335 NUTF2P61970 127 aaKnown RBP7.19□□□□□ -1.26
TMEM260-204ENST00000553335 UBE2G1P62253 170 aa7.19□□□□□ -1.26
TMEM260-204ENST00000553335 PEA15Q15121 130 aa7.19□□□□□ -1.26
TMEM260-204ENST00000553335 CT83Q5H943 113 aa7.19□□□□□ -1.26
TMEM260-204ENST00000553335 MORN3Q6PF18 240 aaPredicted RBP7.19□□□□□ -1.26
TMEM260-204ENST00000553335 TRPT1Q86TN4 253 aaKnown RBP7.19□□□□□ -1.26
TMEM260-204ENST00000553335 TMEM75Q8N9X5 138 aa7.19□□□□□ -1.26
TMEM260-204ENST00000553335 RARRES2Q99969 163 aa7.19□□□□□ -1.26
TMEM260-204ENST00000553335 SMDT1Q9H4I9 107 aa7.19□□□□□ -1.26
TMEM260-204ENST00000553335 SCO2A0A1W2PP80 73 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 RAB19A4D1S5 217 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 TMEM250H0YL14 139 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 IGKV3-20P01619 116 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 IGHV4-30-4P0DP06 118 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 PRB4P10163 310 aaPredicted RBP7.18□□□□□ -1.26
TMEM260-204ENST00000553335 ZNF138P52744 262 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 FLI1Q01543 452 aaPredicted RBP7.18□□□□□ -1.26
TMEM260-204ENST00000553335 ERCC8Q13216 396 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 DEFB121Q5J5C9 76 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 FMC1Q96HJ9 113 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 NDFIP1Q9BT67 221 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 AGPAT4-IT1Q9H0P7 198 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 MED9Q9NWA0 146 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 ZNF492Q9P255 531 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 LENEPQ9Y5L5 61 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 AGRNO00468 2067 aa7.18□□□□□ -1.26
TMEM260-204ENST00000553335 A8MTW9 85 aa7.17□□□□□ -1.26
TMEM260-204ENST00000553335 K7EIL1 84 aa7.17□□□□□ -1.26
TMEM260-204ENST00000553335 AMBPP02760 352 aa7.17□□□□□ -1.26
TMEM260-204ENST00000553335 PRB2P02812 416 aaPredicted RBP7.17□□□□□ -1.26
TMEM260-204ENST00000553335 RPL35AP18077 110 aaKnown RBP7.17□□□□□ -1.26
TMEM260-204ENST00000553335 TSPOP30536 169 aa7.17□□□□□ -1.26
TMEM260-204ENST00000553335 LEPP41159 167 aa7.17□□□□□ -1.26
TMEM260-204ENST00000553335 APOC4P55056 127 aa7.17□□□□□ -1.26
TMEM260-204ENST00000553335 C11orf52Q96A22 123 aa7.17□□□□□ -1.26
TMEM260-204ENST00000553335 ODF3Q96PU9 254 aa7.17□□□□□ -1.26
TMEM260-204ENST00000553335 VGLL1Q99990 258 aa7.17□□□□□ -1.26
TMEM260-204ENST00000553335 C1QTNF4Q9BXJ3 329 aa7.17□□□□□ -1.26
TMEM260-204ENST00000553335 PSG8Q9UQ74 426 aa7.17□□□□□ -1.26
TMEM260-204ENST00000553335 TRAV8-1A0A0A6YYK1 113 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 TRBV7-9A0A0J9YWB2 115 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 TRBV6-1A0A0K0K1D8 114 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 SRP19P09132 144 aaKnown RBP7.16□□□□□ -1.26
TMEM260-204ENST00000553335 CT45A10P0DMU9 189 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 CDKN1BP46527 198 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 TAS2R60P59551 318 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 TMEM183BQ1AE95 376 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 SAPCD1Q5SSQ6 148 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 PRNTQ86SH4 94 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 MRAPQ8TCY5 172 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 C2CD4CQ8TF44 421 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 SGK494Q96LW2 274 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 LINC00479Q96M42 142 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 CSTL1Q9H114 145 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 TREM1Q9NP99 234 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 KLF12Q9Y4X4 402 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 NOTCH3Q9UM47 2321 aa7.16□□□□□ -1.26
TMEM260-204ENST00000553335 TRAV34A0A0B4J273 112 aa7.15□□□□□ -1.26
TMEM260-204ENST00000553335 KIR2DL5BA0A0G2JN68 375 aa7.15□□□□□ -1.26
TMEM260-204ENST00000553335 KIR2DL5BA0A0G2JPC4 375 aa7.15□□□□□ -1.26
TMEM260-204ENST00000553335 LINC00862A6NCI5 91 aa7.15□□□□□ -1.26
TMEM260-204ENST00000553335 UBE2CO00762 179 aa7.15□□□□□ -1.26
TMEM260-204ENST00000553335 GPX1P07203 203 aa7.15□□□□□ -1.26
TMEM260-204ENST00000553335 FRMD6-AS1P0C7T7 363 aa7.15□□□□□ -1.26
TMEM260-204ENST00000553335 RPL35P42766 123 aaKnown RBP7.15□□□□□ -1.26
TMEM260-204ENST00000553335 CEBPGP53567 150 aa7.15□□□□□ -1.26
TMEM260-204ENST00000553335 UQCC3Q6UW78 93 aa7.15□□□□□ -1.26
TMEM260-204ENST00000553335 AMTNQ6UX39 209 aa7.15□□□□□ -1.26
TMEM260-204ENST00000553335 LINC00322Q6ZN03 302 aaPredicted RBP7.15□□□□□ -1.26
TMEM260-204ENST00000553335 KIR2DL5AQ8N109 375 aa7.15□□□□□ -1.26
TMEM260-204ENST00000553335 KIR2DL5BQ8NHK3 375 aa7.15□□□□□ -1.26
TMEM260-204ENST00000553335 Q8TAT8 98 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms