RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 H3BTX0 84 aa7.43□□□□□ -1.22
TMEM116-216ENST00000552800 GATCO43716 136 aaKnown RBP7.43□□□□□ -1.22
TMEM116-216ENST00000552800 LY6G6DO95868 133 aa7.43□□□□□ -1.22
TMEM116-216ENST00000552800 IGHV3-11P01762 117 aa7.43□□□□□ -1.22
TMEM116-216ENST00000552800 RPS10P46783 165 aaKnown RBP7.43□□□□□ -1.22
TMEM116-216ENST00000552800 FHL3Q13643 280 aa7.43□□□□□ -1.22
TMEM116-216ENST00000552800 ACTL10Q5JWF8 245 aa7.43□□□□□ -1.22
TMEM116-216ENST00000552800 DCANP1Q8TF63 244 aa7.43□□□□□ -1.22
TMEM116-216ENST00000552800 RNASE7Q9H1E1 156 aaKnown RBP7.43□□□□□ -1.22
TMEM116-216ENST00000552800 NRN1Q9NPD7 142 aa7.43□□□□□ -1.22
TMEM116-216ENST00000552800 TMA7Q9Y2S6 64 aaKnown RBP7.43□□□□□ -1.22
TMEM116-216ENST00000552800 UBE2CO00762 179 aa7.42□□□□□ -1.22
TMEM116-216ENST00000552800 OVOL1O14753 267 aa7.42□□□□□ -1.22
TMEM116-216ENST00000552800 MT-ND6P03923 174 aa7.42□□□□□ -1.22
TMEM116-216ENST00000552800 TRGC2P03986 189 aa7.42□□□□□ -1.22
TMEM116-216ENST00000552800 SNRPCP09234 159 aaKnown RBP7.42□□□□□ -1.22
TMEM116-216ENST00000552800 HOXA5P20719 270 aa7.42□□□□□ -1.22
TMEM116-216ENST00000552800 LCNL1Q6ZST4 164 aa7.42□□□□□ -1.22
TMEM116-216ENST00000552800 LINC01006Q8NI28 216 aa7.42□□□□□ -1.22
TMEM116-216ENST00000552800 KRTAP4-11Q9BYQ6 195 aa7.42□□□□□ -1.22
TMEM116-216ENST00000552800 NAT8BQ9UHF3 227 aa7.42□□□□□ -1.22
TMEM116-216ENST00000552800 SONP18583 2426 aaKnown RBP7.42□□□□□ -1.22
TMEM116-216ENST00000552800 HIVEP2P31629 2446 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 IGHV4OR15-8A0A075B7B6 117 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 A0A087WW49 117 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 TRAV8-1A0A0A6YYK1 113 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 A0A1B0GXF2 115 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 A0A1W2PPQ1 181 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 ZNF705GA8MUZ8 300 aaPredicted RBP7.41□□□□□ -1.22
TMEM116-216ENST00000552800 HIST1H2BKO60814 126 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 HIST1H2BJP06899 126 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 MGST1P10620 155 aaKnown RBP7.41□□□□□ -1.22
TMEM116-216ENST00000552800 SRD5A1P18405 259 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 CBLN1P23435 193 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 HIST1H2BOP23527 126 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 HIST1H2BBP33778 126 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 HIST1H2BDP58876 126 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 HIST1H2BCP62807 126 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 HIST2H2BEQ16778 126 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 TM4SF20Q53R12 229 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.41□□□□□ -1.22
TMEM116-216ENST00000552800 Q6AWC8 147 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 WDR73Q6P4I2 378 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 PRNTQ86SH4 94 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 NUP35Q8NFH5 326 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 HIST1H2BHQ93079 126 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 ZC2HC1AQ96GY0 325 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 ODF3Q96PU9 254 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 HIST1H2BNQ99877 126 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 HIST1H2BMQ99879 126 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 ASCL2Q99929 193 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 CNFNQ9BYD5 112 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 AGPAT4-IT1Q9H0P7 198 aa7.41□□□□□ -1.22
TMEM116-216ENST00000552800 RPP21Q9H633 154 aaKnown RBP7.41□□□□□ -1.22
TMEM116-216ENST00000552800 OTOGQ6ZRI0 2925 aa7.4□□□□□ -1.22
TMEM116-216ENST00000552800 A0A1B0GW15 77 aa7.4□□□□□ -1.22
TMEM116-216ENST00000552800 C2orf70A6NJV1 201 aa7.4□□□□□ -1.22
TMEM116-216ENST00000552800 A8MTW9 85 aa7.4□□□□□ -1.22
TMEM116-216ENST00000552800 FABP5P3A8MUU1 101 aa7.4□□□□□ -1.22
TMEM116-216ENST00000552800 LINC01619G3V211 115 aa7.4□□□□□ -1.22
TMEM116-216ENST00000552800 P01737 135 aa7.4□□□□□ -1.22
TMEM116-216ENST00000552800 CRISP2P16562 243 aa7.4□□□□□ -1.22
TMEM116-216ENST00000552800 HOXD3P31249 432 aaPredicted RBP7.4□□□□□ -1.22
TMEM116-216ENST00000552800 ZNF138P52744 262 aa7.4□□□□□ -1.22
TMEM116-216ENST00000552800 RPS20P60866 119 aaKnown RBP7.4□□□□□ -1.22
TMEM116-216ENST00000552800 ANKRD39Q53RE8 183 aa7.4□□□□□ -1.22
TMEM116-216ENST00000552800 IL17RELQ6ZVW7 336 aa7.4□□□□□ -1.22
TMEM116-216ENST00000552800 FRZBQ92765 325 aa7.4□□□□□ -1.22
TMEM116-216ENST00000552800 DAZAP1Q96EP5 407 aaKnown RBP7.4□□□□□ -1.22
TMEM116-216ENST00000552800 VGLL1Q99990 258 aa7.4□□□□□ -1.22
TMEM116-216ENST00000552800 KRTAP17-1Q9BYP8 105 aa7.4□□□□□ -1.22
TMEM116-216ENST00000552800 HECTD1Q9ULT8 2610 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 IGHV3OR16-8A0A075B7F1 116 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 A0A1B0GUS0 222 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 ZNF705FA8MVS1 300 aaPredicted RBP7.39□□□□□ -1.23
TMEM116-216ENST00000552800 PRAC2D3DTV9 90 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 K7EQG2 157 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 TRGC1P0CF51 173 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 PROK1P58294 105 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 HIST1H1AQ02539 215 aaPredicted RBP7.39□□□□□ -1.23
TMEM116-216ENST00000552800 SMUG1Q53HV7 270 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 DNLZQ5SXM8 178 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 FAM162BQ5T6X4 162 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 ADAMTSL5Q6ZMM2 481 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 TMEM136Q6ZRR5 245 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 RBPMS2Q6ZRY4 209 aaKnown RBP7.39□□□□□ -1.23
TMEM116-216ENST00000552800 GBGT1Q8N5D6 347 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 OR1N2Q8NGR9 330 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 GTSF1Q8WW33 167 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 C16orf92Q96LL3 132 aa7.39□□□□□ -1.23
TMEM116-216ENST00000552800 TRAV25A0A0B4J276 109 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 HIGD1CA8MV81 97 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 ZNF207O43670 478 aaKnown RBP7.38□□□□□ -1.23
TMEM116-216ENST00000552800 HLA-DQA1P01909 254 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 CT45A10P0DMU9 189 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 ESDP10768 282 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 HLA-DMBP28068 263 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 ID1P41134 155 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 Q0VG73 95 aa7.38□□□□□ -1.23
TMEM116-216ENST00000552800 ZNF493Q6ZR52 646 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms