RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 RABAC1Q9UI14 185 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 A0A1W2PPQ1 181 aa7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 TMEM189A5PLL7 270 aa7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 OXTP01178 125 aa7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 MBP02144 154 aa7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 GCSHP23434 173 aa7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 GATA2P23769 480 aaPredicted RBP7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 ACOT6Q3I5F7 207 aaPredicted RBP7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 FFAR4Q5NUL3 377 aa7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 TMEM182Q6ZP80 229 aaPredicted RBP7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 OR1B1Q8NGR6 318 aa7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 RNF141Q8WVD5 230 aa7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 METTL26Q96S19 204 aa7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 SH3BGRL3Q9H299 93 aa7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 SLC25A32Q9H2D1 315 aa7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 RNF24Q9Y225 148 aa7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 HIGD1AQ9Y241 93 aa7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 YTHDF2Q9Y5A9 579 aaKnown RBP7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 RFNGQ9Y644 331 aa7.01□□□□□ -1.29
SLC48A1-209ENST00000552003 IGHV3OR16-12A0A075B7B8 117 aa7□□□□□ -1.29
SLC48A1-209ENST00000552003 A0A087WTM6 91 aa7□□□□□ -1.29
SLC48A1-209ENST00000552003 OR5G3P0C626 314 aa7□□□□□ -1.29
SLC48A1-209ENST00000552003 SEC11BP0C7V7 166 aa7□□□□□ -1.29
SLC48A1-209ENST00000552003 ORM2P19652 201 aa7□□□□□ -1.29
SLC48A1-209ENST00000552003 NPPCP23582 126 aa7□□□□□ -1.29
SLC48A1-209ENST00000552003 TTC32Q5I0X7 151 aa7□□□□□ -1.29
SLC48A1-209ENST00000552003 AKR1C8PQ5T2L2 129 aa7□□□□□ -1.29
SLC48A1-209ENST00000552003 C10orf113Q5VZT2 155 aa7□□□□□ -1.29
SLC48A1-209ENST00000552003 PHYHIPLQ96FC7 376 aa7□□□□□ -1.29
SLC48A1-209ENST00000552003 GRAMD2BQ96HH9 432 aa7□□□□□ -1.29
SLC48A1-209ENST00000552003 TMEM231Q9H6L2 316 aa7□□□□□ -1.29
SLC48A1-209ENST00000552003 DOK5Q9P104 306 aa7□□□□□ -1.29
SLC48A1-209ENST00000552003 A0A1W2PS18 150 aa6.99□□□□□ -1.29
SLC48A1-209ENST00000552003 SMIM9A6NGZ8 99 aa6.99□□□□□ -1.29
SLC48A1-209ENST00000552003 UMAD1C9J7I0 102 aa6.99□□□□□ -1.29
SLC48A1-209ENST00000552003 PRM2P04554 102 aa6.99□□□□□ -1.29
SLC48A1-209ENST00000552003 M6PRP20645 277 aa6.99□□□□□ -1.29
SLC48A1-209ENST00000552003 CRYBB3P26998 211 aa6.99□□□□□ -1.29
SLC48A1-209ENST00000552003 FXYD7P58549 80 aa6.99□□□□□ -1.29
SLC48A1-209ENST00000552003 DAD1P61803 113 aa6.99□□□□□ -1.29
SLC48A1-209ENST00000552003 RHOBP62745 196 aa6.99□□□□□ -1.29
SLC48A1-209ENST00000552003 RPL11P62913 178 aaKnown RBP6.99□□□□□ -1.29
SLC48A1-209ENST00000552003 TMED6Q8WW62 240 aa6.99□□□□□ -1.29
SLC48A1-209ENST00000552003 MRPL32Q9BYC8 188 aaKnown RBP6.99□□□□□ -1.29
SLC48A1-209ENST00000552003 DNAJC4Q9NNZ3 241 aa6.99□□□□□ -1.29
SLC48A1-209ENST00000552003 H3BMM0 161 aa6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 H3BRN7 92 aa6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 PRB4P10163 310 aaPredicted RBP6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 DEFB1P60022 68 aa6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 C1orf194Q5T5A4 169 aa6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 PATE2Q6UY27 113 aa6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 DPPA3Q6W0C5 159 aa6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 LINC00305Q7Z4B0 112 aa6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 C1orf158Q8N1D5 194 aa6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 STXBP6Q8NFX7 210 aa6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 OR10G4Q8NGN3 311 aa6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 OR10G9Q8NGN4 311 aa6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 OR10G7Q8NGN6 311 aa6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 TMEM37Q8WXS4 190 aa6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 SLC25A39Q9BZJ4 359 aaPredicted RBP6.98□□□□□ -1.29
SLC48A1-209ENST00000552003 TEX48A0A1B0GUV7 120 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 LOC102723971A0A1B0GUV8 181 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 A0A1W2PPV4 95 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 PLA2G1BP04054 148 aaKnown RBP6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 CD5P06127 495 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 CDC34P49427 236 aaPredicted RBP6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 RAB5CP51148 216 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 TAS2R45P59539 299 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 ERVFC1-1P60608 527 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 RAB2AP61019 212 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 ESRGQ1W209 222 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 GCSAMLQ5JQS6 135 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 PSMG4Q5JS54 123 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 GDF5OSQ5U4N7 250 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 FAM78BQ5VT40 261 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 FAM122CQ6P4D5 195 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 GPR82Q96P67 336 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 UPK3BQ9BT76 320 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 SHANK2-AS3Q9BTD1 123 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 TMEM70Q9BUB7 260 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 SSBP4Q9BWG4 385 aaPredicted RBP6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 C1QTNF4Q9BXJ3 329 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 ACTR3CQ9C0K3 210 aaPredicted RBP6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 FUT9Q9Y231 359 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 U3KQE9 123 aa6.97□□□□□ -1.29
SLC48A1-209ENST00000552003 ZNF98A6NK75 572 aa6.96□□□□□ -1.3
SLC48A1-209ENST00000552003 F5H768 121 aa6.96□□□□□ -1.3
SLC48A1-209ENST00000552003 IFNA7P01567 189 aa6.96□□□□□ -1.3
SLC48A1-209ENST00000552003 MT1HL1P0DM35 61 aa6.96□□□□□ -1.3
SLC48A1-209ENST00000552003 SULT1A2P50226 295 aa6.96□□□□□ -1.3
SLC48A1-209ENST00000552003 KHDC3LQ587J8 217 aa6.96□□□□□ -1.3
SLC48A1-209ENST00000552003 ALKAL2Q6UX46 152 aa6.96□□□□□ -1.3
SLC48A1-209ENST00000552003 OR8I2Q8N0Y5 310 aa6.96□□□□□ -1.3
SLC48A1-209ENST00000552003 SLC25A22Q9H936 323 aa6.96□□□□□ -1.3
SLC48A1-209ENST00000552003 RPRMQ9NS64 109 aa6.96□□□□□ -1.3
SLC48A1-209ENST00000552003 MUC2Q02817 5179 aa6.96□□□□□ -1.3
SLC48A1-209ENST00000552003 CTXND1A0A1B0GTU2 59 aa6.95□□□□□ -1.3
SLC48A1-209ENST00000552003 HELTA6NFD8 242 aa6.95□□□□□ -1.3
SLC48A1-209ENST00000552003 BUB3O43684 328 aa6.95□□□□□ -1.3
SLC48A1-209ENST00000552003 RPL7P18124 248 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms