RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 PVALBP20472 110 aaPredicted RBP7.93□□□□□ -1.14
PTCH1-222ENST00000551425 POLR2GP62487 172 aaKnown RBP eCLIP7.93□□□□□ -1.14
PTCH1-222ENST00000551425 IL15RAQ13261 267 aa7.93□□□□□ -1.14
PTCH1-222ENST00000551425 ASB13Q8WXK3 278 aa7.93□□□□□ -1.14
PTCH1-222ENST00000551425 ST6GAL2Q96JF0 529 aa7.93□□□□□ -1.14
PTCH1-222ENST00000551425 SHANK2-AS3Q9BTD1 123 aa7.93□□□□□ -1.14
PTCH1-222ENST00000551425 PARD6GQ9BYG4 376 aaPredicted RBP7.93□□□□□ -1.14
PTCH1-222ENST00000551425 GSN-AS1Q9NRJ2 163 aa7.93□□□□□ -1.14
PTCH1-222ENST00000551425 HHLA3Q9XRX5 114 aa7.93□□□□□ -1.14
PTCH1-222ENST00000551425 K7EPK0 472 aa7.92□□□□□ -1.14
PTCH1-222ENST00000551425 L7N2F9 121 aa7.92□□□□□ -1.14
PTCH1-222ENST00000551425 RS1O15537 224 aa7.92□□□□□ -1.14
PTCH1-222ENST00000551425 SSSCA1O60232 199 aa7.92□□□□□ -1.14
PTCH1-222ENST00000551425 SPINK4O60575 86 aa7.92□□□□□ -1.14
PTCH1-222ENST00000551425 IAPPP10997 89 aa7.92□□□□□ -1.14
PTCH1-222ENST00000551425 GATA2P23769 480 aaPredicted RBP7.92□□□□□ -1.14
PTCH1-222ENST00000551425 H2BFSP57053 126 aa7.92□□□□□ -1.14
PTCH1-222ENST00000551425 TAS2R30P59541 319 aa7.92□□□□□ -1.14
PTCH1-222ENST00000551425 RAB11AP62491 216 aa7.92□□□□□ -1.14
PTCH1-222ENST00000551425 VAMP2P63027 116 aa7.92□□□□□ -1.14
PTCH1-222ENST00000551425 TMEM182Q6ZP80 229 aaPredicted RBP7.92□□□□□ -1.14
PTCH1-222ENST00000551425 ZNF680Q8NEM1 530 aa7.92□□□□□ -1.14
PTCH1-222ENST00000551425 SMIM8Q96KF7 97 aa7.92□□□□□ -1.14
PTCH1-222ENST00000551425 PSENENQ9NZ42 101 aa7.92□□□□□ -1.14
PTCH1-222ENST00000551425 RCL1Q9Y2P8 373 aaKnown RBP7.92□□□□□ -1.14
PTCH1-222ENST00000551425 LSM5Q9Y4Y9 91 aaKnown RBP7.92□□□□□ -1.14
PTCH1-222ENST00000551425 TRAV12-3A0A0B4J271 114 aa7.91□□□□□ -1.14
PTCH1-222ENST00000551425 MT1HL1P0DM35 61 aa7.91□□□□□ -1.14
PTCH1-222ENST00000551425 S100A10P60903 97 aa7.91□□□□□ -1.14
PTCH1-222ENST00000551425 RAB32Q13637 225 aa7.91□□□□□ -1.14
PTCH1-222ENST00000551425 LRRC20Q8TCA0 184 aa7.91□□□□□ -1.14
PTCH1-222ENST00000551425 PPP1R1CQ8WVI7 109 aa7.91□□□□□ -1.14
PTCH1-222ENST00000551425 C8orf49Q96NF6 230 aa7.91□□□□□ -1.14
PTCH1-222ENST00000551425 VGLL1Q99990 258 aa7.91□□□□□ -1.14
PTCH1-222ENST00000551425 STRAPQ9Y3F4 350 aaKnown RBP7.91□□□□□ -1.14
PTCH1-222ENST00000551425 IBA57-AS1B1ANH7 110 aa7.9□□□□□ -1.14
PTCH1-222ENST00000551425 K7EQD1 137 aa7.9□□□□□ -1.14
PTCH1-222ENST00000551425 GIPP09681 153 aaPredicted RBP7.9□□□□□ -1.14
PTCH1-222ENST00000551425 PET100P0DJ07 73 aa7.9□□□□□ -1.14
PTCH1-222ENST00000551425 CXCL2P19875 107 aa7.9□□□□□ -1.14
PTCH1-222ENST00000551425 SRIP30626 198 aa7.9□□□□□ -1.14
PTCH1-222ENST00000551425 RAP2BP61225 183 aa7.9□□□□□ -1.14
PTCH1-222ENST00000551425 ZNF415Q09FC8 603 aa7.9□□□□□ -1.14
PTCH1-222ENST00000551425 FHL2Q14192 279 aa7.9□□□□□ -1.14
PTCH1-222ENST00000551425 LRRC37A5PQ49AS3 106 aa7.9□□□□□ -1.14
PTCH1-222ENST00000551425 SPANXN5Q5MJ07 72 aa7.9□□□□□ -1.14
PTCH1-222ENST00000551425 ODF3Q96PU9 254 aa7.9□□□□□ -1.14
PTCH1-222ENST00000551425 CHAC1Q9BUX1 264 aa7.9□□□□□ -1.14
PTCH1-222ENST00000551425 MRPL32Q9BYC8 188 aaKnown RBP7.9□□□□□ -1.14
PTCH1-222ENST00000551425 ZNF331Q9NQX6 463 aaPredicted RBP7.9□□□□□ -1.14
PTCH1-222ENST00000551425 PAIP2BQ9ULR5 123 aaKnown RBP7.9□□□□□ -1.14
PTCH1-222ENST00000551425 HIGD1AQ9Y241 93 aa7.9□□□□□ -1.14
PTCH1-222ENST00000551425 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
PTCH1-222ENST00000551425 E5RGE8 158 aa7.89□□□□□ -1.15
PTCH1-222ENST00000551425 TSC22D2O75157 780 aa7.89□□□□□ -1.15
PTCH1-222ENST00000551425 MPC2O95563 127 aa7.89□□□□□ -1.15
PTCH1-222ENST00000551425 IGHV3-53P01767 116 aa7.89□□□□□ -1.15
PTCH1-222ENST00000551425 LEPP41159 167 aa7.89□□□□□ -1.15
PTCH1-222ENST00000551425 BCAP31P51572 246 aa7.89□□□□□ -1.15
PTCH1-222ENST00000551425 TCL1AP56279 114 aa7.89□□□□□ -1.15
PTCH1-222ENST00000551425 ANXA2RQ3ZCQ2 193 aa7.89□□□□□ -1.15
PTCH1-222ENST00000551425 TEPPQ6URK8 271 aa7.89□□□□□ -1.15
PTCH1-222ENST00000551425 KLF12Q9Y4X4 402 aa7.89□□□□□ -1.15
PTCH1-222ENST00000551425 IGHV3-38A0A0C4DH36 116 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 PRAC2D3DTV9 90 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 PRSS46E5RG02 174 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 H3BP45 60 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 J3KRW8 73 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 MRPS12O15235 138 aaKnown RBP7.88□□□□□ -1.15
PTCH1-222ENST00000551425 HYPMO75409 117 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 CT45A10P0DMU9 189 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 CAV2P51636 162 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 PLP1P60201 277 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 LCN15Q6UWW0 184 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 ACOT7LQ6ZUV0 252 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 THAP6Q8TBB0 222 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 CHAC2Q8WUX2 184 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 SLC50A1Q9BRV3 221 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 C11orf1Q9H5F2 150 aa7.88□□□□□ -1.15
PTCH1-222ENST00000551425 hCG_2014768A0A024R1R8 64 aa7.87□□□□□ -1.15
PTCH1-222ENST00000551425 PMS2P5A8MQ11 134 aa7.87□□□□□ -1.15
PTCH1-222ENST00000551425 H0YIZ8 118 aa7.87□□□□□ -1.15
PTCH1-222ENST00000551425 IGLV2-8P01709 118 aa7.87□□□□□ -1.15
PTCH1-222ENST00000551425 SLC25A5P05141 298 aaKnown RBP7.87□□□□□ -1.15
PTCH1-222ENST00000551425 WFDC2Q14508 124 aa7.87□□□□□ -1.15
PTCH1-222ENST00000551425 TDRG1Q3Y452 100 aa7.87□□□□□ -1.15
PTCH1-222ENST00000551425 LINC01556Q5JQF7 62 aa7.87□□□□□ -1.15
PTCH1-222ENST00000551425 IBA57Q5T440 356 aaKnown RBP7.87□□□□□ -1.15
PTCH1-222ENST00000551425 TMEM14EPQ6UXP3 125 aa7.87□□□□□ -1.15
PTCH1-222ENST00000551425 IQCF2Q8IXL9 164 aa7.87□□□□□ -1.15
PTCH1-222ENST00000551425 EIF4E3Q8N5X7 224 aaKnown RBP7.87□□□□□ -1.15
PTCH1-222ENST00000551425 OR10P1Q8NGE3 313 aa7.87□□□□□ -1.15
PTCH1-222ENST00000551425 CIRBP-AS1Q8TBR5 109 aa7.87□□□□□ -1.15
PTCH1-222ENST00000551425 PCNPQ8WW12 178 aaKnown RBP7.87□□□□□ -1.15
PTCH1-222ENST00000551425 SLC25A31Q9H0C2 315 aa7.87□□□□□ -1.15
PTCH1-222ENST00000551425 Q9HAA7 133 aa7.87□□□□□ -1.15
PTCH1-222ENST00000551425 LYRM2Q9NU23 88 aaPredicted RBP7.87□□□□□ -1.15
PTCH1-222ENST00000551425 OR5AC2Q9NZP5 309 aa7.87□□□□□ -1.15
PTCH1-222ENST00000551425 FAM24AA6NFZ4 105 aa7.86□□□□□ -1.15
PTCH1-222ENST00000551425 ORM1P02763 201 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms