RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 FAM74A3Q4VXF1 159 aa6.05□□□□□ -1.44
DEPDC4-207ENST00000549249 CENPWQ5EE01 88 aa6.05□□□□□ -1.44
DEPDC4-207ENST00000549249 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
DEPDC4-207ENST00000549249 LCN12Q6JVE5 192 aa6.05□□□□□ -1.44
DEPDC4-207ENST00000549249 Q86TA4 180 aa6.05□□□□□ -1.44
DEPDC4-207ENST00000549249 ARL6IP6Q8N6S5 226 aa6.05□□□□□ -1.44
DEPDC4-207ENST00000549249 TMEM75Q8N9X5 138 aa6.05□□□□□ -1.44
DEPDC4-207ENST00000549249 ASCL2Q99929 193 aa6.05□□□□□ -1.44
DEPDC4-207ENST00000549249 NIPSNAP3BQ9BS92 247 aa6.05□□□□□ -1.44
DEPDC4-207ENST00000549249 NAT8Q9UHE5 227 aa6.05□□□□□ -1.44
DEPDC4-207ENST00000549249 ANK2Q01484 3957 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 TRBV6-1A0A0K0K1D8 114 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 C9JCJ5 164 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 K7EN84 100 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 SAP30O75446 220 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 IGLV1-51P01701 117 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 ZNF688P0C7X2 276 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 CSN1S1P47710 185 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 TAS2R60P59551 318 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 ERCC8Q13216 396 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 TMEM241Q24JQ0 296 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 CLRN3Q8NCR9 226 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 ZNF738Q8NE65 137 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 OCC1Q8TAD7 63 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 TVP23CQ96ET8 276 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 FMC1Q96HJ9 113 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 VGLL1Q99990 258 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 AURKAIP1Q9NWT8 199 aaPredicted RBP6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 CLEC5AQ9NY25 188 aa6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 ZNF256Q9Y2P7 627 aaPredicted RBP6.04□□□□□ -1.44
DEPDC4-207ENST00000549249 TRAV2A0A0B4J234 112 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 TRAV25A0A0B4J276 109 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 SERTM2A0A1B0GWG4 89 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 RBAKDNA6NC62 111 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 F6UB75 175 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 DNASE2O00115 360 aaPredicted RBP6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 SCO1O75880 301 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 LTAP01374 205 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 ZNF705DP0CH99 300 aaPredicted RBP6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 ZNF705BP0CI00 300 aaPredicted RBP6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 UBE2G1P62253 170 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 FLI1Q01543 452 aaPredicted RBP6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 ADIRFQ15847 76 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 ZNF124Q15973 351 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 SAMD13Q5VXD3 122 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 RBPMS2Q6ZRY4 209 aaKnown RBP6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 LINC01551Q86U37 167 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 SVBPQ8N300 66 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 NHLRC2Q8NBF2 726 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 MLST8Q9BVC4 326 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 GPR61Q9BZJ8 451 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 PSG8Q9UQ74 426 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 LY96Q9Y6Y9 160 aa6.03□□□□□ -1.44
DEPDC4-207ENST00000549249 C7orf77A4D0Y5 90 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 M0R036 132 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 SNAPINO95295 136 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 S100A9P06702 114 aaKnown RBP6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 ID1P41134 155 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 GNG4P50150 75 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 PAFAH1B2P68402 229 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 PNRC1Q12796 327 aaPredicted RBP6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 OR5I1Q13606 314 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 PSMG4Q5JS54 123 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 GDF5OSQ5U4N7 250 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 C9orf47Q6ZRZ4 202 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 PRNTQ86SH4 94 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 BAGE2Q86Y30 109 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 OR8A1Q8NGG7 326 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 OR2K2Q8NGT1 345 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 Q8TAT8 98 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 ISOC2Q96AB3 205 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 C8orf49Q96NF6 230 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 SPAG8Q99932 426 aaPredicted RBP6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 AGPAT4-IT1Q9H0P7 198 aa6.02□□□□□ -1.45
DEPDC4-207ENST00000549249 A0A0J9YX75 114 aa6.01□□□□□ -1.45
DEPDC4-207ENST00000549249 NPIPB6E9PJ23 425 aa6.01□□□□□ -1.45
DEPDC4-207ENST00000549249 K7EQM0 130 aa6.01□□□□□ -1.45
DEPDC4-207ENST00000549249 GCGP01275 180 aa6.01□□□□□ -1.45
DEPDC4-207ENST00000549249 DEFB131AP59861 70 aa6.01□□□□□ -1.45
DEPDC4-207ENST00000549249 SNRPD3P62318 126 aaKnown RBP6.01□□□□□ -1.45
DEPDC4-207ENST00000549249 ODF3L2Q3SX64 289 aa6.01□□□□□ -1.45
DEPDC4-207ENST00000549249 PRR31Q5SQ13 230 aa6.01□□□□□ -1.45
DEPDC4-207ENST00000549249 LINC00322Q6ZN03 302 aaPredicted RBP6.01□□□□□ -1.45
DEPDC4-207ENST00000549249 TMEM183AQ8IXX5 376 aa6.01□□□□□ -1.45
DEPDC4-207ENST00000549249 WFDC9Q8NEX5 89 aa6.01□□□□□ -1.45
DEPDC4-207ENST00000549249 ZC2HC1AQ96GY0 325 aa6.01□□□□□ -1.45
DEPDC4-207ENST00000549249 MAP6D1Q9H9H5 199 aa6.01□□□□□ -1.45
DEPDC4-207ENST00000549249 OR4C46A6NHA9 309 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 A8MTW9 85 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 CT45A10P0DMU9 189 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 MGST1P10620 155 aaKnown RBP6□□□□□ -1.45
DEPDC4-207ENST00000549249 ZNF138P52744 262 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 HIST1H1AQ02539 215 aaPredicted RBP6□□□□□ -1.45
DEPDC4-207ENST00000549249 RHEBQ15382 184 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 BEAN1Q3B7T3 259 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 RNF212Q495C1 297 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 C9orf66Q5T8R8 295 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 COX8CQ7Z4L0 72 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 OR10J6PQ8NGY7 276 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 SMIM12Q96EX1 92 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms