RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 SSX7Q7RTT5 188 aa8.95□□□□□ -0.98
PTCH1-218ENST00000548945 MAPKAPK5-AS1Q8N8E1 139 aa8.95□□□□□ -0.98
PTCH1-218ENST00000548945 OR5C1Q8NGR4 320 aa8.95□□□□□ -0.98
PTCH1-218ENST00000548945 STOML3Q8TAV4 291 aa8.95□□□□□ -0.98
PTCH1-218ENST00000548945 RXFP4Q8TDU9 374 aa8.95□□□□□ -0.98
PTCH1-218ENST00000548945 ARV1Q9H2C2 271 aa8.95□□□□□ -0.98
PTCH1-218ENST00000548945 Q9H8V8 135 aa8.95□□□□□ -0.98
PTCH1-218ENST00000548945 ZNF331Q9NQX6 463 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-218ENST00000548945 A0A1W2PPQ1 181 aa8.94□□□□□ -0.98
PTCH1-218ENST00000548945 H3BNG1 76 aa8.94□□□□□ -0.98
PTCH1-218ENST00000548945 TPT1P13693 172 aaKnown RBP8.94□□□□□ -0.98
PTCH1-218ENST00000548945 M6PRP20645 277 aa8.94□□□□□ -0.98
PTCH1-218ENST00000548945 OR10P1Q8NGE3 313 aa8.94□□□□□ -0.98
PTCH1-218ENST00000548945 GNPNAT1Q96EK6 184 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-218ENST00000548945 UPK3BQ9BT76 320 aa8.94□□□□□ -0.98
PTCH1-218ENST00000548945 SMIM3Q9BZL3 60 aa8.94□□□□□ -0.98
PTCH1-218ENST00000548945 Q9H3A6 140 aa8.94□□□□□ -0.98
PTCH1-218ENST00000548945 CYTL1Q9NRR1 136 aa8.94□□□□□ -0.98
PTCH1-218ENST00000548945 RGS13O14921 159 aa8.93□□□□□ -0.98
PTCH1-218ENST00000548945 IFNA7P01567 189 aa8.93□□□□□ -0.98
PTCH1-218ENST00000548945 IFITM2Q01629 132 aa8.93□□□□□ -0.98
PTCH1-218ENST00000548945 SLC38A11Q08AI6 406 aa8.93□□□□□ -0.98
PTCH1-218ENST00000548945 ATP6V1FQ16864 119 aa8.93□□□□□ -0.98
PTCH1-218ENST00000548945 TEX261Q6UWH6 196 aa8.93□□□□□ -0.98
PTCH1-218ENST00000548945 BPIFA4PQ86YQ2 179 aa8.93□□□□□ -0.98
PTCH1-218ENST00000548945 CCDC28AQ8IWP9 274 aa8.93□□□□□ -0.98
PTCH1-218ENST00000548945 Q8N1X5 172 aa8.93□□□□□ -0.98
PTCH1-218ENST00000548945 ATP5SQ99766 215 aa8.93□□□□□ -0.98
PTCH1-218ENST00000548945 GGACTQ9BVM4 153 aa8.93□□□□□ -0.98
PTCH1-218ENST00000548945 TRAV26-1A0A087WT03 109 aa8.92□□□□□ -0.98
PTCH1-218ENST00000548945 OR5I1Q13606 314 aa8.92□□□□□ -0.98
PTCH1-218ENST00000548945 RPL7L1Q6DKI1 246 aaKnown RBP8.92□□□□□ -0.98
PTCH1-218ENST00000548945 LINC00305Q7Z4B0 112 aa8.92□□□□□ -0.98
PTCH1-218ENST00000548945 SPATA12Q7Z6I5 190 aa8.92□□□□□ -0.98
PTCH1-218ENST00000548945 PHYHIPLQ96FC7 376 aa8.92□□□□□ -0.98
PTCH1-218ENST00000548945 ODF3Q96PU9 254 aa8.92□□□□□ -0.98
PTCH1-218ENST00000548945 WFDC1Q9HC57 220 aa8.92□□□□□ -0.98
PTCH1-218ENST00000548945 PXMP4Q9Y6I8 212 aa8.92□□□□□ -0.98
PTCH1-218ENST00000548945 AGPAT2O15120 278 aa8.91□□□□□ -0.98
PTCH1-218ENST00000548945 IFNA5P01569 189 aa8.91□□□□□ -0.98
PTCH1-218ENST00000548945 ARL16Q0P5N6 197 aa8.91□□□□□ -0.98
PTCH1-218ENST00000548945 GFI1BQ5VTD9 330 aa8.91□□□□□ -0.98
PTCH1-218ENST00000548945 EIF5AL1Q6IS14 154 aaKnown RBP8.91□□□□□ -0.98
PTCH1-218ENST00000548945 ZNF680Q8NEM1 530 aa8.91□□□□□ -0.98
PTCH1-218ENST00000548945 KRTAP1-5Q9BYS1 174 aa8.91□□□□□ -0.98
PTCH1-218ENST00000548945 MRPS16Q9Y3D3 137 aaKnown RBP8.91□□□□□ -0.98
PTCH1-218ENST00000548945 SNURFLB1AK76 121 aa8.9□□□□□ -0.98
PTCH1-218ENST00000548945 COX7A2P2O60397 106 aa8.9□□□□□ -0.98
PTCH1-218ENST00000548945 IGLC2P0DOY2 106 aa8.9□□□□□ -0.98
PTCH1-218ENST00000548945 DAZ2Q13117 558 aaKnown RBP8.9□□□□□ -0.98
PTCH1-218ENST00000548945 KIR3DS1Q14943 382 aa8.9□□□□□ -0.98
PTCH1-218ENST00000548945 VWC2Q2TAL6 325 aa8.9□□□□□ -0.98
PTCH1-218ENST00000548945 PYGO2Q9BRQ0 406 aa8.9□□□□□ -0.98
PTCH1-218ENST00000548945 PARD6GQ9BYG4 376 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-218ENST00000548945 UQCC1Q9NVA1 299 aa8.9□□□□□ -0.98
PTCH1-218ENST00000548945 GAGE12BA1L429 117 aa8.89□□□□□ -0.99
PTCH1-218ENST00000548945 SLC17A3O00476 420 aa8.89□□□□□ -0.99
PTCH1-218ENST00000548945 GAGE7O76087 117 aa8.89□□□□□ -0.99
PTCH1-218ENST00000548945 GAGE12FP0CL80 117 aa8.89□□□□□ -0.99
PTCH1-218ENST00000548945 GAGE12GP0CL81 117 aa8.89□□□□□ -0.99
PTCH1-218ENST00000548945 GAGE12IP0CL82 117 aa8.89□□□□□ -0.99
PTCH1-218ENST00000548945 HOXA5P20719 270 aa8.89□□□□□ -0.99
PTCH1-218ENST00000548945 LEPP41159 167 aa8.89□□□□□ -0.99
PTCH1-218ENST00000548945 GUK1Q16774 197 aa8.89□□□□□ -0.99
PTCH1-218ENST00000548945 ESRGQ1W209 222 aa8.89□□□□□ -0.99
PTCH1-218ENST00000548945 SCGB1C1Q8TD33 95 aa8.89□□□□□ -0.99
PTCH1-218ENST00000548945 TMEM37Q8WXS4 190 aa8.89□□□□□ -0.99
PTCH1-218ENST00000548945 SAT2Q96F10 170 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-218ENST00000548945 C18orf15Q96N68 181 aa8.89□□□□□ -0.99
PTCH1-218ENST00000548945 DMBT1Q9UGM3 2413 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-218ENST00000548945 A0A0J9YY99 117 aa8.88□□□□□ -0.99
PTCH1-218ENST00000548945 UBE2L5PA0A1B0GUS4 154 aa8.88□□□□□ -0.99
PTCH1-218ENST00000548945 PRAC2D3DTV9 90 aa8.88□□□□□ -0.99
PTCH1-218ENST00000548945 NPIPB6E9PJ23 425 aa8.88□□□□□ -0.99
PTCH1-218ENST00000548945 RAB31Q13636 194 aa8.88□□□□□ -0.99
PTCH1-218ENST00000548945 C10orf113Q5VZT2 155 aa8.88□□□□□ -0.99
PTCH1-218ENST00000548945 ALKAL2Q6UX46 152 aa8.88□□□□□ -0.99
PTCH1-218ENST00000548945 HSD17B11Q8NBQ5 300 aa8.88□□□□□ -0.99
PTCH1-218ENST00000548945 MGST2Q99735 147 aa8.88□□□□□ -0.99
PTCH1-218ENST00000548945 WDR61Q9GZS3 305 aaKnown RBP8.88□□□□□ -0.99
PTCH1-218ENST00000548945 DNAJC4Q9NNZ3 241 aa8.88□□□□□ -0.99
PTCH1-218ENST00000548945 SCRT2Q9NQ03 307 aa8.88□□□□□ -0.99
PTCH1-218ENST00000548945 H3BQ15 152 aa8.87□□□□□ -0.99
PTCH1-218ENST00000548945 ZNF253O75346 499 aa8.87□□□□□ -0.99
PTCH1-218ENST00000548945 MPDU1O75352 247 aa8.87□□□□□ -0.99
PTCH1-218ENST00000548945 SEC11BP0C7V7 166 aa8.87□□□□□ -0.99
PTCH1-218ENST00000548945 CT45A10P0DMU9 189 aa8.87□□□□□ -0.99
PTCH1-218ENST00000548945 PRB4P10163 310 aaPredicted RBP8.87□□□□□ -0.99
PTCH1-218ENST00000548945 MORN5Q5VZ52 161 aa8.87□□□□□ -0.99
PTCH1-218ENST00000548945 Q6ZRG5 221 aa8.87□□□□□ -0.99
PTCH1-218ENST00000548945 TMED6Q8WW62 240 aa8.87□□□□□ -0.99
PTCH1-218ENST00000548945 MRPL53Q96EL3 112 aaKnown RBP8.87□□□□□ -0.99
PTCH1-218ENST00000548945 TMPRSS5Q9H3S3 457 aa8.87□□□□□ -0.99
PTCH1-218ENST00000548945 WDR83OSQ9Y284 106 aa8.87□□□□□ -0.99
PTCH1-218ENST00000548945 TRAV12-3A0A0B4J271 114 aa8.86□□□□□ -0.99
PTCH1-218ENST00000548945 SLC25A5P05141 298 aaKnown RBP8.86□□□□□ -0.99
PTCH1-218ENST00000548945 SNRPCP09234 159 aaKnown RBP8.86□□□□□ -0.99
PTCH1-218ENST00000548945 FGF7P21781 194 aa8.86□□□□□ -0.99
PTCH1-218ENST00000548945 ATP6V0CP27449 155 aa8.86□□□□□ -0.99
PTCH1-218ENST00000548945 CAMLGP49069 296 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms