RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 RNF222A6NCQ9 220 aa11.22□□□□□ -0.61
DDX54-205ENST00000548786 ATP6V0CP27449 155 aa11.22□□□□□ -0.61
DDX54-205ENST00000548786 Q8TAT8 98 aa11.22□□□□□ -0.61
DDX54-205ENST00000548786 RPH3ALQ9UNE2 315 aa11.22□□□□□ -0.61
DDX54-205ENST00000548786 H7BYZ3 331 aa11.21□□□□□ -0.61
DDX54-205ENST00000548786 RNASE4P34096 147 aaKnown RBP11.21□□□□□ -0.61
DDX54-205ENST00000548786 BTN1A1Q13410 526 aa11.21□□□□□ -0.61
DDX54-205ENST00000548786 TMEM78Q5T7P6 136 aa11.21□□□□□ -0.61
DDX54-205ENST00000548786 RPL7L1Q6DKI1 246 aaKnown RBP11.21□□□□□ -0.61
DDX54-205ENST00000548786 LGALS9CQ6DKI2 356 aa11.21□□□□□ -0.61
DDX54-205ENST00000548786 ASB13Q8WXK3 278 aa11.21□□□□□ -0.61
DDX54-205ENST00000548786 C16orf74Q96GX8 76 aa11.21□□□□□ -0.61
DDX54-205ENST00000548786 ODF3Q96PU9 254 aa11.21□□□□□ -0.61
DDX54-205ENST00000548786 TNFSF18Q9UNG2 199 aa11.21□□□□□ -0.61
DDX54-205ENST00000548786 C7orf71A4D174 169 aa11.2□□□□□ -0.62
DDX54-205ENST00000548786 G3V3Q6 166 aa11.2□□□□□ -0.62
DDX54-205ENST00000548786 CSN1S1P47710 185 aa11.2□□□□□ -0.62
DDX54-205ENST00000548786 CD300CQ08708 224 aa11.2□□□□□ -0.62
DDX54-205ENST00000548786 NOP10Q9NPE3 64 aaKnown RBP11.2□□□□□ -0.62
DDX54-205ENST00000548786 EPPK1P58107 5090 aaKnown RBP11.19□□□□□ -0.62
DDX54-205ENST00000548786 KMT2AQ03164 3969 aa11.19□□□□□ -0.62
DDX54-205ENST00000548786 LYRM9A8MSI8 78 aa11.19□□□□□ -0.62
DDX54-205ENST00000548786 ARPC5O15511 151 aa11.19□□□□□ -0.62
DDX54-205ENST00000548786 GPX1P07203 203 aa11.19□□□□□ -0.62
DDX54-205ENST00000548786 ARL14EPLP0DKL9 152 aa11.19□□□□□ -0.62
DDX54-205ENST00000548786 CDC34P49427 236 aaPredicted RBP11.19□□□□□ -0.62
DDX54-205ENST00000548786 TCTAP57738 103 aa11.19□□□□□ -0.62
DDX54-205ENST00000548786 PRR9Q5T870 116 aa11.19□□□□□ -0.62
DDX54-205ENST00000548786 C9orf47Q6ZRZ4 202 aa11.19□□□□□ -0.62
DDX54-205ENST00000548786 CCDC28AQ8IWP9 274 aa11.19□□□□□ -0.62
DDX54-205ENST00000548786 RNASE8Q8TDE3 154 aaKnown RBP11.19□□□□□ -0.62
DDX54-205ENST00000548786 TMEM263Q8WUH6 116 aaKnown RBP11.19□□□□□ -0.62
DDX54-205ENST00000548786 LINC00477Q96M19 166 aa11.19□□□□□ -0.62
DDX54-205ENST00000548786 C20orf144Q9BQM9 153 aa11.19□□□□□ -0.62
DDX54-205ENST00000548786 NDUFAF3Q9BU61 184 aa11.19□□□□□ -0.62
DDX54-205ENST00000548786 SLC25A5P05141 298 aaKnown RBP11.18□□□□□ -0.62
DDX54-205ENST00000548786 Q6ZQT7 251 aa11.18□□□□□ -0.62
DDX54-205ENST00000548786 OR2G3Q8NGZ4 309 aa11.18□□□□□ -0.62
DDX54-205ENST00000548786 FAM19A4Q96LR4 140 aa11.18□□□□□ -0.62
DDX54-205ENST00000548786 PSMG3Q9BT73 122 aaPredicted RBP11.18□□□□□ -0.62
DDX54-205ENST00000548786 TIMM8BQ9Y5J9 83 aaPredicted RBP11.18□□□□□ -0.62
DDX54-205ENST00000548786 BORCS7-ASMTA0A0B4J1R7 106 aa11.17□□□□□ -0.62
DDX54-205ENST00000548786 PGPA6NDG6 321 aa11.17□□□□□ -0.62
DDX54-205ENST00000548786 ZNF138P52744 262 aa11.17□□□□□ -0.62
DDX54-205ENST00000548786 TMEM88Q6PEY1 159 aa11.17□□□□□ -0.62
DDX54-205ENST00000548786 PQLC2Q6ZP29 291 aa11.17□□□□□ -0.62
DDX54-205ENST00000548786 IQCF2Q8IXL9 164 aa11.17□□□□□ -0.62
DDX54-205ENST00000548786 RAB24Q969Q5 203 aa11.17□□□□□ -0.62
DDX54-205ENST00000548786 ZNF492Q9P255 531 aa11.17□□□□□ -0.62
DDX54-205ENST00000548786 KLLNB2CW77 178 aa11.16□□□□□ -0.62
DDX54-205ENST00000548786 F5H768 121 aa11.16□□□□□ -0.62
DDX54-205ENST00000548786 GNG5P63218 68 aa11.16□□□□□ -0.62
DDX54-205ENST00000548786 ZNF493Q6ZR52 646 aa11.16□□□□□ -0.62
DDX54-205ENST00000548786 SSX7Q7RTT5 188 aa11.16□□□□□ -0.62
DDX54-205ENST00000548786 LYPD1Q8N2G4 141 aa11.16□□□□□ -0.62
DDX54-205ENST00000548786 ZFAND2AQ8N6M9 145 aa11.16□□□□□ -0.62
DDX54-205ENST00000548786 CMTM2Q8TAZ6 248 aa11.16□□□□□ -0.62
DDX54-205ENST00000548786 OTORQ9NRC9 128 aa11.16□□□□□ -0.62
DDX54-205ENST00000548786 CBY3A6NI87 242 aa11.15□□□□□ -0.62
DDX54-205ENST00000548786 SNURFLB1AK76 121 aa11.15□□□□□ -0.62
DDX54-205ENST00000548786 DIRC3C9JPN6 131 aa11.15□□□□□ -0.62
DDX54-205ENST00000548786 PYGO2Q9BRQ0 406 aa11.15□□□□□ -0.62
DDX54-205ENST00000548786 DNAH6Q9C0G6 4158 aa11.15□□□□□ -0.62
DDX54-205ENST00000548786 GAGE12BA1L429 117 aa11.14□□□□□ -0.63
DDX54-205ENST00000548786 ZNF324O75467 553 aaPredicted RBP11.14□□□□□ -0.63
DDX54-205ENST00000548786 GAGE7O76087 117 aa11.14□□□□□ -0.63
DDX54-205ENST00000548786 MBP02144 154 aa11.14□□□□□ -0.63
DDX54-205ENST00000548786 GAGE12FP0CL80 117 aa11.14□□□□□ -0.63
DDX54-205ENST00000548786 GAGE12GP0CL81 117 aa11.14□□□□□ -0.63
DDX54-205ENST00000548786 GAGE12IP0CL82 117 aa11.14□□□□□ -0.63
DDX54-205ENST00000548786 STAG3L2P0CL84 134 aa11.14□□□□□ -0.63
DDX54-205ENST00000548786 STAG3L3P0CL85 134 aa11.14□□□□□ -0.63
DDX54-205ENST00000548786 CRISP2P16562 243 aa11.14□□□□□ -0.63
DDX54-205ENST00000548786 GCHFRP30047 84 aa11.14□□□□□ -0.63
DDX54-205ENST00000548786 SERF2P84101 59 aa11.14□□□□□ -0.63
DDX54-205ENST00000548786 GOLT1AQ6ZVE7 132 aa11.14□□□□□ -0.63
DDX54-205ENST00000548786 RXFP4Q8TDU9 374 aa11.14□□□□□ -0.63
DDX54-205ENST00000548786 GNPNAT1Q96EK6 184 aaPredicted RBP11.14□□□□□ -0.63
DDX54-205ENST00000548786 ACTR3CQ9C0K3 210 aaPredicted RBP11.14□□□□□ -0.63
DDX54-205ENST00000548786 GSN-AS1Q9NRJ2 163 aa11.14□□□□□ -0.63
DDX54-205ENST00000548786 TRAV8-1A0A0A6YYK1 113 aa11.13□□□□□ -0.63
DDX54-205ENST00000548786 RGS13O14921 159 aa11.13□□□□□ -0.63
DDX54-205ENST00000548786 ATP5G1P05496 136 aa11.13□□□□□ -0.63
DDX54-205ENST00000548786 ATP5G3P48201 142 aa11.13□□□□□ -0.63
DDX54-205ENST00000548786 FAM74A1Q5RGS3 127 aa11.13□□□□□ -0.63
DDX54-205ENST00000548786 MUC21Q5SSG8 566 aa11.13□□□□□ -0.63
DDX54-205ENST00000548786 SGK494Q96LW2 274 aa11.13□□□□□ -0.63
DDX54-205ENST00000548786 TP53TG3Q9ULZ0 132 aa11.13□□□□□ -0.63
DDX54-205ENST00000548786 DNAH10Q8IVF4 4471 aa11.13□□□□□ -0.63
DDX54-205ENST00000548786 RBAKDNA6NC62 111 aa11.12□□□□□ -0.63
DDX54-205ENST00000548786 Q6ZTI0 123 aa11.12□□□□□ -0.63
DDX54-205ENST00000548786 UBE2DNLQ8IWF7 75 aa11.12□□□□□ -0.63
DDX54-205ENST00000548786 EIF4E3Q8N5X7 224 aaKnown RBP11.12□□□□□ -0.63
DDX54-205ENST00000548786 CYTL1Q9NRR1 136 aa11.12□□□□□ -0.63
DDX54-205ENST00000548786 F6UZH7 168 aa11.11□□□□□ -0.63
DDX54-205ENST00000548786 CXorf1O96002 111 aa11.11□□□□□ -0.63
DDX54-205ENST00000548786 NMBP08949 121 aa11.11□□□□□ -0.63
DDX54-205ENST00000548786 P0DMU3 169 aa11.11□□□□□ -0.63
DDX54-205ENST00000548786 FAM231AP0DMU4 169 aa11.11□□□□□ -0.63
DDX54-205ENST00000548786 FAM231CP0DMU5 169 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms