RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 ADARB2-AS1A8MUL3 147 aa8.45□□□□□ -1.06
SCN8A-205ENST00000548086 EDN2P20800 178 aa8.45□□□□□ -1.06
SCN8A-205ENST00000548086 SRIP30626 198 aa8.45□□□□□ -1.06
SCN8A-205ENST00000548086 TCL1AP56279 114 aa8.45□□□□□ -1.06
SCN8A-205ENST00000548086 KLF5Q13887 457 aaPredicted RBP8.45□□□□□ -1.06
SCN8A-205ENST00000548086 NSUN5P1Q3KNT7 163 aa8.45□□□□□ -1.06
SCN8A-205ENST00000548086 LINC00305Q7Z4B0 112 aa8.45□□□□□ -1.06
SCN8A-205ENST00000548086 C18orf32Q8TCD1 76 aa8.45□□□□□ -1.06
SCN8A-205ENST00000548086 C4orf3Q8WVX3 66 aa8.45□□□□□ -1.06
SCN8A-205ENST00000548086 GRAMD2BQ96HH9 432 aa8.45□□□□□ -1.06
SCN8A-205ENST00000548086 ZFAND3Q9H8U3 227 aa8.45□□□□□ -1.06
SCN8A-205ENST00000548086 ZNF705FA8MVS1 300 aaPredicted RBP8.44□□□□□ -1.06
SCN8A-205ENST00000548086 ZNF324O75467 553 aaPredicted RBP8.44□□□□□ -1.06
SCN8A-205ENST00000548086 CA1P00915 261 aaPredicted RBP8.44□□□□□ -1.06
SCN8A-205ENST00000548086 ZNF705DP0CH99 300 aaPredicted RBP8.44□□□□□ -1.06
SCN8A-205ENST00000548086 ZNF705BP0CI00 300 aaPredicted RBP8.44□□□□□ -1.06
SCN8A-205ENST00000548086 MGST1P10620 155 aaKnown RBP8.44□□□□□ -1.06
SCN8A-205ENST00000548086 GP9P14770 177 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 SLURP1P55000 103 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 GDF5OSQ5U4N7 250 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 ATP5L2Q7Z4Y8 100 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 NUP35Q8NFH5 326 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 NUDT10Q8NFP7 164 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 OR11H1Q8NG94 326 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 TSKUQ8WUA8 353 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 RNF125Q96EQ8 232 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 NUDT11Q96G61 164 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 SAMD10Q9BYL1 202 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 NRN1Q9NPD7 142 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 ZNF586Q9NXT0 402 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 SELENOKQ9Y6D0 94 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 IGHV3OR16-13A0A075B7E8 117 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 IGHV3-49A0A0A0MS15 119 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 IGHV3-74A0A0B4J1X5 117 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 ZNF253O75346 499 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 CT83Q5H943 113 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 LEMD1Q68G75 181 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 MRPL54Q6P161 138 aaKnown RBP8.44□□□□□ -1.06
SCN8A-205ENST00000548086 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 OR4B1Q8NGF8 309 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 EPDR1Q9UM22 224 aa8.44□□□□□ -1.06
SCN8A-205ENST00000548086 TSSC4Q9Y5U2 329 aaPredicted RBP8.44□□□□□ -1.06
SCN8A-205ENST00000548086 WNK1Q9H4A3 2382 aa8.43□□□□□ -1.06
SCN8A-205ENST00000548086 WI2-2373I1.2A0A1W2PRP0 233 aa8.43□□□□□ -1.06
SCN8A-205ENST00000548086 SPINK4O60575 86 aa8.43□□□□□ -1.06
SCN8A-205ENST00000548086 APCSP02743 223 aa8.43□□□□□ -1.06
SCN8A-205ENST00000548086 HOXD3P31249 432 aaPredicted RBP8.43□□□□□ -1.06
SCN8A-205ENST00000548086 KIAA1644Q3SXP7 199 aa8.43□□□□□ -1.06
SCN8A-205ENST00000548086 TMEM190Q8WZ59 177 aa8.43□□□□□ -1.06
SCN8A-205ENST00000548086 RAX2Q96IS3 184 aa8.43□□□□□ -1.06
SCN8A-205ENST00000548086 ATP6V0BQ99437 205 aa8.43□□□□□ -1.06
SCN8A-205ENST00000548086 VAMP8Q9BV40 100 aa8.43□□□□□ -1.06
SCN8A-205ENST00000548086 ZNF492Q9P255 531 aa8.43□□□□□ -1.06
SCN8A-205ENST00000548086 IGHV3-66A0A0C4DH42 116 aa8.42□□□□□ -1.06
SCN8A-205ENST00000548086 TCAPO15273 167 aa8.42□□□□□ -1.06
SCN8A-205ENST00000548086 SCGB2A1O75556 95 aa8.42□□□□□ -1.06
SCN8A-205ENST00000548086 LTAP01374 205 aa8.42□□□□□ -1.06
SCN8A-205ENST00000548086 APOHP02749 345 aaPredicted RBP8.42□□□□□ -1.06
SCN8A-205ENST00000548086 HIST1H1EP10412 219 aaKnown RBP8.42□□□□□ -1.06
SCN8A-205ENST00000548086 AMTP48728 403 aa8.42□□□□□ -1.06
SCN8A-205ENST00000548086 SYNJ2BPP57105 145 aa8.42□□□□□ -1.06
SCN8A-205ENST00000548086 RELQ04864 619 aaPredicted RBP8.42□□□□□ -1.06
SCN8A-205ENST00000548086 ZNF331Q9NQX6 463 aaPredicted RBP8.42□□□□□ -1.06
SCN8A-205ENST00000548086 TRAV34A0A0B4J273 112 aa8.42□□□□□ -1.06
SCN8A-205ENST00000548086 C19orf71A6NCJ1 209 aa8.42□□□□□ -1.06
SCN8A-205ENST00000548086 HYPMO75409 117 aa8.42□□□□□ -1.06
SCN8A-205ENST00000548086 TM4SF20Q53R12 229 aa8.42□□□□□ -1.06
SCN8A-205ENST00000548086 C5orf17Q8NAS9 161 aa8.42□□□□□ -1.06
SCN8A-205ENST00000548086 OR1N2Q8NGR9 330 aa8.42□□□□□ -1.06
SCN8A-205ENST00000548086 GPR82Q96P67 336 aa8.42□□□□□ -1.06
SCN8A-205ENST00000548086 ATG101Q9BSB4 218 aa8.42□□□□□ -1.06
SCN8A-205ENST00000548086 DIRC3C9JPN6 131 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 NPIPB6E9PJ23 425 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 LINC01619G3V211 115 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 NDUFA4O00483 81 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 C3orf79P0CE67 100 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 GNG5P63218 68 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 C16orf54Q6UWD8 224 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 DPF1Q92782 380 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 FMC1Q96HJ9 113 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 ALKBH7Q9BT30 221 aaPredicted RBP8.41□□□□□ -1.06
SCN8A-205ENST00000548086 TMEM14CQ9P0S9 112 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 HIGD1AQ9Y241 93 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 PAM16Q9Y3D7 125 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 TRBV6-1A0A0K0K1D8 114 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 FAM231BA6NCW3 169 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 HIGD1CA8MV81 97 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 CCL24O00175 119 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 NBEAP1P0C6P0 100 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 DLX4Q92988 240 aaPredicted RBP8.41□□□□□ -1.06
SCN8A-205ENST00000548086 CITED1Q99966 193 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 SLC25A39Q9BZJ4 359 aaPredicted RBP8.41□□□□□ -1.06
SCN8A-205ENST00000548086 GFRA4Q9GZZ7 299 aa8.41□□□□□ -1.06
SCN8A-205ENST00000548086 TCRAP04437 139 aa8.4□□□□□ -1.06
SCN8A-205ENST00000548086 LINC00322Q6ZN03 302 aaPredicted RBP8.4□□□□□ -1.06
SCN8A-205ENST00000548086 GPHB5Q86YW7 130 aa8.4□□□□□ -1.06
SCN8A-205ENST00000548086 RABAC1Q9UI14 185 aa8.4□□□□□ -1.06
SCN8A-205ENST00000548086 PGPA6NDG6 321 aa8.39□□□□□ -1.07
SCN8A-205ENST00000548086 H3BRN7 92 aa8.39□□□□□ -1.07
SCN8A-205ENST00000548086 SLC25A5P05141 298 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms