RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CYTL1Q9NRR1 136 aa13.39□□□□□ -0.27
PRPF40B-206ENST00000547764 DNAH1Q9P2D7 4330 aa13.39□□□□□ -0.27
PRPF40B-206ENST00000547764 STAG3L2P0CL84 134 aa13.38□□□□□ -0.27
PRPF40B-206ENST00000547764 STAG3L3P0CL85 134 aa13.38□□□□□ -0.27
PRPF40B-206ENST00000547764 ARL14EPLP0DKL9 152 aa13.38□□□□□ -0.27
PRPF40B-206ENST00000547764 HTN1P15515 57 aa13.38□□□□□ -0.27
PRPF40B-206ENST00000547764 CSN1S1P47710 185 aa13.38□□□□□ -0.27
PRPF40B-206ENST00000547764 C2CD4CQ8TF44 421 aa13.38□□□□□ -0.27
PRPF40B-206ENST00000547764 FAM19A4Q96LR4 140 aa13.38□□□□□ -0.27
PRPF40B-206ENST00000547764 ALMS1Q8TCU4 4167 aa13.38□□□□□ -0.27
PRPF40B-206ENST00000547764 TRAV10A0A0B4J240 114 aa13.37□□□□□ -0.27
PRPF40B-206ENST00000547764 HMSDA8MTL9 139 aa13.37□□□□□ -0.27
PRPF40B-206ENST00000547764 H7BYZ3 331 aa13.37□□□□□ -0.27
PRPF40B-206ENST00000547764 TMEM78Q5T7P6 136 aa13.37□□□□□ -0.27
PRPF40B-206ENST00000547764 KCNRGQ8N5I3 272 aa13.37□□□□□ -0.27
PRPF40B-206ENST00000547764 ACTR3CQ9C0K3 210 aaPredicted RBP13.37□□□□□ -0.27
PRPF40B-206ENST00000547764 OTORQ9NRC9 128 aa13.37□□□□□ -0.27
PRPF40B-206ENST00000547764 PLA2G2EQ9NZK7 142 aa13.37□□□□□ -0.27
PRPF40B-206ENST00000547764 TRAV12-3A0A0B4J271 114 aa13.36□□□□□ -0.27
PRPF40B-206ENST00000547764 TEX48A0A1B0GUV7 120 aa13.36□□□□□ -0.27
PRPF40B-206ENST00000547764 PGPA6NDG6 321 aa13.36□□□□□ -0.27
PRPF40B-206ENST00000547764 SLC25A5P05141 298 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-206ENST00000547764 ZNF345Q14585 488 aa13.36□□□□□ -0.27
PRPF40B-206ENST00000547764 RXFP4Q8TDU9 374 aa13.36□□□□□ -0.27
PRPF40B-206ENST00000547764 HYLS1Q96M11 299 aa13.36□□□□□ -0.27
PRPF40B-206ENST00000547764 NIPSNAP3BQ9BS92 247 aa13.36□□□□□ -0.27
PRPF40B-206ENST00000547764 PLAC8L1A1L4L8 177 aa13.35□□□□□ -0.27
PRPF40B-206ENST00000547764 RBAKDNA6NC62 111 aa13.35□□□□□ -0.27
PRPF40B-206ENST00000547764 KLLNB2CW77 178 aa13.35□□□□□ -0.27
PRPF40B-206ENST00000547764 DIRC3C9JPN6 131 aa13.35□□□□□ -0.27
PRPF40B-206ENST00000547764 CRISP2P16562 243 aa13.35□□□□□ -0.27
PRPF40B-206ENST00000547764 GCHFRP30047 84 aa13.35□□□□□ -0.27
PRPF40B-206ENST00000547764 Q6ZNX1 250 aa13.35□□□□□ -0.27
PRPF40B-206ENST00000547764 SSX7Q7RTT5 188 aa13.35□□□□□ -0.27
PRPF40B-206ENST00000547764 ARPC5LQ9BPX5 153 aa13.35□□□□□ -0.27
PRPF40B-206ENST00000547764 ZNF492Q9P255 531 aa13.35□□□□□ -0.27
PRPF40B-206ENST00000547764 DEFB131BA0A096LNP1 70 aa13.34□□□□□ -0.27
PRPF40B-206ENST00000547764 C7orf71A4D174 169 aa13.34□□□□□ -0.27
PRPF40B-206ENST00000547764 IGLL5B9A064 214 aa13.34□□□□□ -0.27
PRPF40B-206ENST00000547764 ZNF138P52744 262 aa13.34□□□□□ -0.27
PRPF40B-206ENST00000547764 CD300CQ08708 224 aa13.34□□□□□ -0.27
PRPF40B-206ENST00000547764 FAM74A1Q5RGS3 127 aa13.34□□□□□ -0.27
PRPF40B-206ENST00000547764 SUN5Q8TC36 379 aa13.34□□□□□ -0.27
PRPF40B-206ENST00000547764 LINC00476Q8WZB0 136 aa13.34□□□□□ -0.27
PRPF40B-206ENST00000547764 C16orf74Q96GX8 76 aa13.34□□□□□ -0.27
PRPF40B-206ENST00000547764 HYDINQ4G0P3 5121 aa13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 A0A0D9SG52 128 aa13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 CXorf1O96002 111 aa13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 GPX1P07203 203 aa13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 NMBP08949 121 aa13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 RNASE4P34096 147 aaKnown RBP13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 BTN1A1Q13410 526 aa13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 ZNF726P1Q15940 193 aa13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 AKR1C8PQ5T2L2 129 aa13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 ZNF493Q6ZR52 646 aa13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 ZFAND2AQ8N6M9 145 aa13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 Q8TAT8 98 aa13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 CMTM2Q8TAZ6 248 aa13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 RNASE8Q8TDE3 154 aaKnown RBP13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 ST6GAL2Q96JF0 529 aa13.33□□□□□ -0.28
PRPF40B-206ENST00000547764 LYRM9A8MSI8 78 aa13.32□□□□□ -0.28
PRPF40B-206ENST00000547764 ZNF324O75467 553 aaPredicted RBP13.32□□□□□ -0.28
PRPF40B-206ENST00000547764 TMEM263Q8WUH6 116 aaKnown RBP13.32□□□□□ -0.28
PRPF40B-206ENST00000547764 RPH3ALQ9UNE2 315 aa13.32□□□□□ -0.28
PRPF40B-206ENST00000547764 TRBV7-9A0A0J9YWB2 115 aa13.31□□□□□ -0.28
PRPF40B-206ENST00000547764 CTXND1A0A1B0GTU2 59 aa13.31□□□□□ -0.28
PRPF40B-206ENST00000547764 LY6G6CO95867 125 aa13.31□□□□□ -0.28
PRPF40B-206ENST00000547764 TCTAP57738 103 aa13.31□□□□□ -0.28
PRPF40B-206ENST00000547764 DAD1P61803 113 aa13.31□□□□□ -0.28
PRPF40B-206ENST00000547764 PRR9Q5T870 116 aa13.31□□□□□ -0.28
PRPF40B-206ENST00000547764 CCDC28AQ8IWP9 274 aa13.31□□□□□ -0.28
PRPF40B-206ENST00000547764 ARL6IP6Q8N6S5 226 aa13.31□□□□□ -0.28
PRPF40B-206ENST00000547764 PYGO2Q9BRQ0 406 aa13.31□□□□□ -0.28
PRPF40B-206ENST00000547764 TMEM167BQ9NRX6 74 aa13.31□□□□□ -0.28
PRPF40B-206ENST00000547764 APLNQ9ULZ1 77 aa13.31□□□□□ -0.28
PRPF40B-206ENST00000547764 IGHV4-4A0A075B6R2 117 aa13.3□□□□□ -0.28
PRPF40B-206ENST00000547764 KANTRA0A1W2PQU2 76 aa13.3□□□□□ -0.28
PRPF40B-206ENST00000547764 BCL2L11O43521 198 aa13.3□□□□□ -0.28
PRPF40B-206ENST00000547764 GOLT1AQ6ZVE7 132 aa13.3□□□□□ -0.28
PRPF40B-206ENST00000547764 TIMM8BQ9Y5J9 83 aaPredicted RBP13.3□□□□□ -0.28
PRPF40B-206ENST00000547764 DEFB130BP0DP73 79 aa13.29□□□□□ -0.28
PRPF40B-206ENST00000547764 DEFB130AP0DP74 79 aa13.29□□□□□ -0.28
PRPF40B-206ENST00000547764 GNG5P63218 68 aa13.29□□□□□ -0.28
PRPF40B-206ENST00000547764 Q6ZQT7 251 aa13.29□□□□□ -0.28
PRPF40B-206ENST00000547764 IQCF2Q8IXL9 164 aa13.29□□□□□ -0.28
PRPF40B-206ENST00000547764 ZNF471Q9BX82 626 aaPredicted RBP13.29□□□□□ -0.28
PRPF40B-206ENST00000547764 NOP10Q9NPE3 64 aaKnown RBP13.29□□□□□ -0.28
PRPF40B-206ENST00000547764 HTN3P15516 51 aa13.28□□□□□ -0.28
PRPF40B-206ENST00000547764 TMUB2Q71RG4 321 aa13.28□□□□□ -0.28
PRPF40B-206ENST00000547764 TCTE3Q8IZS6 198 aa13.28□□□□□ -0.28
PRPF40B-206ENST00000547764 TMED6Q8WW62 240 aa13.28□□□□□ -0.28
PRPF40B-206ENST00000547764 LINC00467Q9BRT7 94 aa13.28□□□□□ -0.28
PRPF40B-206ENST00000547764 TMPRSS5Q9H3S3 457 aa13.28□□□□□ -0.28
PRPF40B-206ENST00000547764 LENEPQ9Y5L5 61 aa13.28□□□□□ -0.28
PRPF40B-206ENST00000547764 GGTLC3B5MD39 225 aa13.27□□□□□ -0.29
PRPF40B-206ENST00000547764 FGF8P55075 233 aaPredicted RBP13.27□□□□□ -0.29
PRPF40B-206ENST00000547764 SUMO1P63165 101 aaKnown RBP13.27□□□□□ -0.29
PRPF40B-206ENST00000547764 LGALS9CQ6DKI2 356 aa13.27□□□□□ -0.29
PRPF40B-206ENST00000547764 C5orf17Q8NAS9 161 aa13.27□□□□□ -0.29
PRPF40B-206ENST00000547764 TRAV8-1A0A0A6YYK1 113 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms