RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 RANP62826 216 aaKnown RBP8.46□□□□□ -1.06
RAB5C-204ENST00000547517 CD300CQ08708 224 aa8.46□□□□□ -1.06
RAB5C-204ENST00000547517 RPL7L1Q6DKI1 246 aaKnown RBP8.46□□□□□ -1.06
RAB5C-204ENST00000547517 TMEM256Q8N2U0 113 aa8.46□□□□□ -1.06
RAB5C-204ENST00000547517 OR2G3Q8NGZ4 309 aa8.46□□□□□ -1.06
RAB5C-204ENST00000547517 ODF3Q96PU9 254 aa8.46□□□□□ -1.06
RAB5C-204ENST00000547517 PSMG3Q9BT73 122 aaPredicted RBP8.46□□□□□ -1.06
RAB5C-204ENST00000547517 Q9H3A6 140 aa8.46□□□□□ -1.06
RAB5C-204ENST00000547517 DKK2Q9UBU2 259 aa8.46□□□□□ -1.06
RAB5C-204ENST00000547517 DEFB131BA0A096LNP1 70 aa8.45□□□□□ -1.06
RAB5C-204ENST00000547517 BORCS7-ASMTA0A0B4J1R7 106 aa8.45□□□□□ -1.06
RAB5C-204ENST00000547517 IGLL5B9A064 214 aa8.45□□□□□ -1.06
RAB5C-204ENST00000547517 TAS2R60P59551 318 aa8.45□□□□□ -1.06
RAB5C-204ENST00000547517 NIPSNAP3BQ9BS92 247 aa8.45□□□□□ -1.06
RAB5C-204ENST00000547517 BOLA1Q9Y3E2 137 aa8.45□□□□□ -1.06
RAB5C-204ENST00000547517 BIRC6Q9NR09 4857 aa8.45□□□□□ -1.06
RAB5C-204ENST00000547517 TRAV12-3A0A0B4J271 114 aa8.44□□□□□ -1.06
RAB5C-204ENST00000547517 H7BYZ3 331 aa8.44□□□□□ -1.06
RAB5C-204ENST00000547517 ARL14EPLP0DKL9 152 aa8.44□□□□□ -1.06
RAB5C-204ENST00000547517 AZU1P20160 251 aa8.44□□□□□ -1.06
RAB5C-204ENST00000547517 CSN1S1P47710 185 aa8.44□□□□□ -1.06
RAB5C-204ENST00000547517 TMEM78Q5T7P6 136 aa8.44□□□□□ -1.06
RAB5C-204ENST00000547517 PQLC2Q6ZP29 291 aa8.44□□□□□ -1.06
RAB5C-204ENST00000547517 Q8TAT8 98 aa8.44□□□□□ -1.06
RAB5C-204ENST00000547517 VGLL1Q99990 258 aa8.44□□□□□ -1.06
RAB5C-204ENST00000547517 C20orf144Q9BQM9 153 aa8.44□□□□□ -1.06
RAB5C-204ENST00000547517 AGPAT4-IT1Q9H0P7 198 aa8.44□□□□□ -1.06
RAB5C-204ENST00000547517 PLA2G2EQ9NZK7 142 aa8.44□□□□□ -1.06
RAB5C-204ENST00000547517 IGHV4-4A0A075B6R2 117 aa8.43□□□□□ -1.06
RAB5C-204ENST00000547517 C7orf71A4D174 169 aa8.43□□□□□ -1.06
RAB5C-204ENST00000547517 MBP02144 154 aa8.43□□□□□ -1.06
RAB5C-204ENST00000547517 HTN3P15516 51 aa8.43□□□□□ -1.06
RAB5C-204ENST00000547517 BTN1A1Q13410 526 aa8.43□□□□□ -1.06
RAB5C-204ENST00000547517 C9orf47Q6ZRZ4 202 aa8.43□□□□□ -1.06
RAB5C-204ENST00000547517 LYPD1Q8N2G4 141 aa8.43□□□□□ -1.06
RAB5C-204ENST00000547517 GNPNAT1Q96EK6 184 aaPredicted RBP8.43□□□□□ -1.06
RAB5C-204ENST00000547517 C16orf74Q96GX8 76 aa8.43□□□□□ -1.06
RAB5C-204ENST00000547517 LINC00477Q96M19 166 aa8.43□□□□□ -1.06
RAB5C-204ENST00000547517 RPH3ALQ9UNE2 315 aa8.43□□□□□ -1.06
RAB5C-204ENST00000547517 PLAC8L1A1L4L8 177 aa8.42□□□□□ -1.06
RAB5C-204ENST00000547517 SLC25A5P05141 298 aaKnown RBP8.42□□□□□ -1.06
RAB5C-204ENST00000547517 DAD1P61803 113 aa8.42□□□□□ -1.06
RAB5C-204ENST00000547517 SERF2P84101 59 aa8.42□□□□□ -1.06
RAB5C-204ENST00000547517 CMTM2Q8TAZ6 248 aa8.42□□□□□ -1.06
RAB5C-204ENST00000547517 RNASE8Q8TDE3 154 aaKnown RBP8.42□□□□□ -1.06
RAB5C-204ENST00000547517 TMEM263Q8WUH6 116 aaKnown RBP8.42□□□□□ -1.06
RAB5C-204ENST00000547517 RAB24Q969Q5 203 aa8.42□□□□□ -1.06
RAB5C-204ENST00000547517 FAM19A4Q96LR4 140 aa8.42□□□□□ -1.06
RAB5C-204ENST00000547517 OTORQ9NRC9 128 aa8.42□□□□□ -1.06
RAB5C-204ENST00000547517 LYRM9A8MSI8 78 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 KLLNB2CW77 178 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 TAAR5O14804 337 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 STAG3L2P0CL84 134 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 STAG3L3P0CL85 134 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 DEFB130BP0DP73 79 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 DEFB130AP0DP74 79 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 GCHFRP30047 84 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 RNASE4P34096 147 aaKnown RBP8.41□□□□□ -1.06
RAB5C-204ENST00000547517 ZNF138P52744 262 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 TCTAP57738 103 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 IFITM2Q01629 132 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 FAM74A1Q5RGS3 127 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 PRR9Q5T870 116 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 SSX7Q7RTT5 188 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 CCDC28AQ8IWP9 274 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 IQCF2Q8IXL9 164 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 ACTR3CQ9C0K3 210 aaPredicted RBP8.41□□□□□ -1.06
RAB5C-204ENST00000547517 ZNF492Q9P255 531 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 APLNQ9ULZ1 77 aa8.41□□□□□ -1.06
RAB5C-204ENST00000547517 RBAKDNA6NC62 111 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 PGPA6NDG6 321 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 DIRC3C9JPN6 131 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 GPX1P07203 203 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 CRISP2P16562 243 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 GNG5P63218 68 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 ZNF345Q14585 488 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 AKR1C8PQ5T2L2 129 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 ZNF493Q6ZR52 646 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 ZFAND2AQ8N6M9 145 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 OR11H4Q8NGC9 324 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 RXFP4Q8TDU9 374 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 ARPC5LQ9BPX5 153 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 PYGO2Q9BRQ0 406 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 NOP10Q9NPE3 64 aaKnown RBP8.4□□□□□ -1.06
RAB5C-204ENST00000547517 CYTL1Q9NRR1 136 aa8.4□□□□□ -1.06
RAB5C-204ENST00000547517 CXorf1O96002 111 aa8.39□□□□□ -1.07
RAB5C-204ENST00000547517 NKX2-5P52952 324 aaPredicted RBP8.39□□□□□ -1.07
RAB5C-204ENST00000547517 ZNF726P1Q15940 193 aa8.39□□□□□ -1.07
RAB5C-204ENST00000547517 LGALS9CQ6DKI2 356 aa8.39□□□□□ -1.07
RAB5C-204ENST00000547517 GOLT1AQ6ZVE7 132 aa8.39□□□□□ -1.07
RAB5C-204ENST00000547517 KCNRGQ8N5I3 272 aa8.39□□□□□ -1.07
RAB5C-204ENST00000547517 TIMM8BQ9Y5J9 83 aaPredicted RBP8.39□□□□□ -1.07
RAB5C-204ENST00000547517 CBY3A6NI87 242 aa8.38□□□□□ -1.07
RAB5C-204ENST00000547517 SNURFLB1AK76 121 aa8.38□□□□□ -1.07
RAB5C-204ENST00000547517 NMBP08949 121 aa8.38□□□□□ -1.07
RAB5C-204ENST00000547517 Q6ZQT7 251 aa8.38□□□□□ -1.07
RAB5C-204ENST00000547517 NDUFAF3Q9BU61 184 aa8.38□□□□□ -1.07
RAB5C-204ENST00000547517 TMEM167BQ9NRX6 74 aa8.38□□□□□ -1.07
RAB5C-204ENST00000547517 VPS13DQ5THJ4 4388 aa8.37□□□□□ -1.07
RAB5C-204ENST00000547517 TRAV8-1A0A0A6YYK1 113 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms