RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 BOD1L2Q8IYS8 172 aa11.28□□□□□ -0.6
LETMD1-209ENST00000547318 C5orf56Q8N8D9 126 aa11.28□□□□□ -0.6
LETMD1-209ENST00000547318 OR4X2Q8NGF9 303 aa11.28□□□□□ -0.6
LETMD1-209ENST00000547318 AKAP13Q12802 2813 aa11.28□□□□□ -0.6
LETMD1-209ENST00000547318 ATP5G2Q06055 141 aa11.27□□□□□ -0.61
LETMD1-209ENST00000547318 VAMP3Q15836 100 aa11.27□□□□□ -0.61
LETMD1-209ENST00000547318 C9orf139Q6ZV77 190 aa11.27□□□□□ -0.61
LETMD1-209ENST00000547318 C2orf91Q6ZV80 131 aa11.27□□□□□ -0.61
LETMD1-209ENST00000547318 OR4C5Q8NGB2 326 aa11.27□□□□□ -0.61
LETMD1-209ENST00000547318 PEF1Q9UBV8 284 aaKnown RBP11.27□□□□□ -0.61
LETMD1-209ENST00000547318 TIMM8BQ9Y5J9 83 aaPredicted RBP11.27□□□□□ -0.61
LETMD1-209ENST00000547318 CEP250Q9BV73 2442 aa11.27□□□□□ -0.61
LETMD1-209ENST00000547318 A6NDN8 102 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 H3BUA1 57 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 NCR2O95944 276 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 FGF6P10767 208 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 LOXL1Q08397 574 aaPredicted RBP11.26□□□□□ -0.61
LETMD1-209ENST00000547318 TMEM97Q5BJF2 176 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 ZNF575Q86XF7 245 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 CFAP47Q6ZTR5 3102 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 MUC21A0A0G2JKD1 596 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 MUC21A0A140T8X8 626 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 SMAD7O15105 426 aaKnown RBP11.26□□□□□ -0.61
LETMD1-209ENST00000547318 ATP5LO75964 103 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 FAM106AQ4KMX7 169 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 MUC21Q5SSG8 566 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 CLEC19AQ6UXS0 136 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 IL17RELQ6ZVW7 336 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 UBTD1Q9HAC8 227 aa11.26□□□□□ -0.61
LETMD1-209ENST00000547318 DMXL1Q9Y485 3027 aa11.25□□□□□ -0.61
LETMD1-209ENST00000547318 NDUFS7O75251 213 aa11.25□□□□□ -0.61
LETMD1-209ENST00000547318 TNFRSF6BO95407 300 aa11.25□□□□□ -0.61
LETMD1-209ENST00000547318 HLA-DMBP28068 263 aa11.25□□□□□ -0.61
LETMD1-209ENST00000547318 HSD52Q0P140 79 aa11.25□□□□□ -0.61
LETMD1-209ENST00000547318 C19orf54Q5BKX5 351 aa11.25□□□□□ -0.61
LETMD1-209ENST00000547318 Q8N8P6 123 aa11.25□□□□□ -0.61
LETMD1-209ENST00000547318 ANKHD1Q8IWZ3 2542 aaKnown RBP11.25□□□□□ -0.61
LETMD1-209ENST00000547318 HLA-DRB4P13762 266 aa11.25□□□□□ -0.61
LETMD1-209ENST00000547318 C8orf86Q6ZUL3 223 aa11.25□□□□□ -0.61
LETMD1-209ENST00000547318 AGPAT4-IT1Q9H0P7 198 aa11.25□□□□□ -0.61
LETMD1-209ENST00000547318 HLA-DRB4X5D2U9 266 aa11.25□□□□□ -0.61
LETMD1-209ENST00000547318 TRAV41A0A0B4J266 112 aa11.24□□□□□ -0.61
LETMD1-209ENST00000547318 SNAI2O43623 268 aa11.24□□□□□ -0.61
LETMD1-209ENST00000547318 PRSS57Q6UWY2 283 aa11.24□□□□□ -0.61
LETMD1-209ENST00000547318 ZMAT4Q9H898 229 aa11.24□□□□□ -0.61
LETMD1-209ENST00000547318 TRAV8-2A0A0B4J237 113 aa11.23□□□□□ -0.61
LETMD1-209ENST00000547318 A1L4Q6 167 aa11.23□□□□□ -0.61
LETMD1-209ENST00000547318 PRAC2D3DTV9 90 aa11.23□□□□□ -0.61
LETMD1-209ENST00000547318 ERCC8Q13216 396 aa11.23□□□□□ -0.61
LETMD1-209ENST00000547318 KIR3DS1Q14943 382 aa11.23□□□□□ -0.61
LETMD1-209ENST00000547318 PIP4P2Q8N4L2 257 aa11.23□□□□□ -0.61
LETMD1-209ENST00000547318 MCRIP2Q9BUT9 160 aaKnown RBP11.23□□□□□ -0.61
LETMD1-209ENST00000547318 BPESC1Q9GZL8 116 aa11.23□□□□□ -0.61
LETMD1-209ENST00000547318 TRBV7-9A0A0J9YWB2 115 aa11.23□□□□□ -0.61
LETMD1-209ENST00000547318 A0A1W2PPR1 153 aa11.23□□□□□ -0.61
LETMD1-209ENST00000547318 ANKRD39Q53RE8 183 aa11.23□□□□□ -0.61
LETMD1-209ENST00000547318 IGFL4Q6B9Z1 124 aa11.23□□□□□ -0.61
LETMD1-209ENST00000547318 MRAP2Q96G30 205 aa11.23□□□□□ -0.61
LETMD1-209ENST00000547318 LINC00477Q96M19 166 aa11.23□□□□□ -0.61
LETMD1-209ENST00000547318 GVINP1Q7Z2Y8 2422 aa11.23□□□□□ -0.61
LETMD1-209ENST00000547318 MGAQ8IWI9 3026 aa11.22□□□□□ -0.61
LETMD1-209ENST00000547318 IGKV3D-20A0A0C4DH25 116 aa11.22□□□□□ -0.61
LETMD1-209ENST00000547318 H3BRM9 83 aa11.22□□□□□ -0.61
LETMD1-209ENST00000547318 K7EMI3 77 aa11.22□□□□□ -0.61
LETMD1-209ENST00000547318 NDUFA4O00483 81 aa11.22□□□□□ -0.61
LETMD1-209ENST00000547318 GLMPQ8WWB7 406 aa11.22□□□□□ -0.61
LETMD1-209ENST00000547318 USMG5Q96IX5 58 aa11.22□□□□□ -0.61
LETMD1-209ENST00000547318 MEGF9Q9H1U4 602 aa11.22□□□□□ -0.61
LETMD1-209ENST00000547318 HIGD1BQ9P298 99 aa11.22□□□□□ -0.61
LETMD1-209ENST00000547318 SMKR1H3BMG3 65 aa11.21□□□□□ -0.61
LETMD1-209ENST00000547318 OVOL1O14753 267 aa11.21□□□□□ -0.61
LETMD1-209ENST00000547318 IGF1P05019 195 aa11.21□□□□□ -0.61
LETMD1-209ENST00000547318 MED14OSP0DP75 135 aa11.21□□□□□ -0.61
LETMD1-209ENST00000547318 LEPP41159 167 aa11.21□□□□□ -0.61
LETMD1-209ENST00000547318 RNF182Q8N6D2 247 aa11.21□□□□□ -0.61
LETMD1-209ENST00000547318 OR2K2Q8NGT1 345 aa11.21□□□□□ -0.61
LETMD1-209ENST00000547318 BOD1L1Q8NFC6 3051 aa11.21□□□□□ -0.62
LETMD1-209ENST00000547318 IGHV7-4-1A0A0J9YVY3 117 aa11.21□□□□□ -0.62
LETMD1-209ENST00000547318 G3V318 75 aa11.21□□□□□ -0.62
LETMD1-209ENST00000547318 EVI2AP22794 236 aa11.21□□□□□ -0.62
LETMD1-209ENST00000547318 PTPRQQ9UMZ3 2332 aa11.2□□□□□ -0.62
LETMD1-209ENST00000547318 MAP1BP46821 2468 aaKnown RBP11.2□□□□□ -0.62
LETMD1-209ENST00000547318 IGHV1-69DA0A0B4J2H0 117 aa11.2□□□□□ -0.62
LETMD1-209ENST00000547318 IGHV3-35A0A0C4DH35 117 aa11.2□□□□□ -0.62
LETMD1-209ENST00000547318 C7orf71A4D174 169 aa11.2□□□□□ -0.62
LETMD1-209ENST00000547318 IGHV1-69P01742 117 aa11.2□□□□□ -0.62
LETMD1-209ENST00000547318 ITLN2Q8WWU7 325 aaPredicted RBP11.2□□□□□ -0.62
LETMD1-209ENST00000547318 C16orf92Q96LL3 132 aa11.2□□□□□ -0.62
LETMD1-209ENST00000547318 MSRB1Q9NZV6 116 aa11.2□□□□□ -0.62
LETMD1-209ENST00000547318 RIF1Q5UIP0 2472 aaKnown RBP11.2□□□□□ -0.62
LETMD1-209ENST00000547318 ZFHX2Q9C0A1 2572 aaPredicted RBP11.2□□□□□ -0.62
LETMD1-209ENST00000547318 IGLV2-18A0A075B6J9 118 aa11.19□□□□□ -0.62
LETMD1-209ENST00000547318 NDUFS8O00217 210 aa11.19□□□□□ -0.62
LETMD1-209ENST00000547318 ODF1Q14990 250 aa11.19□□□□□ -0.62
LETMD1-209ENST00000547318 SAMD13Q5VXD3 122 aa11.19□□□□□ -0.62
LETMD1-209ENST00000547318 AP1S3Q96PC3 154 aa11.19□□□□□ -0.62
LETMD1-209ENST00000547318 TP73-AS1Q9UF72 201 aa11.19□□□□□ -0.62
LETMD1-209ENST00000547318 IGHV3OR16-8A0A075B7F1 116 aa11.19□□□□□ -0.62
LETMD1-209ENST00000547318 ARL3P36405 182 aa11.19□□□□□ -0.62
LETMD1-209ENST00000547318 Q6ZVH6 145 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms