RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 PPP1R1CQ8WVI7 109 aa7.23□□□□□ -1.25
BEST3-208ENST00000547208 WDR61Q9GZS3 305 aaKnown RBP7.23□□□□□ -1.25
BEST3-208ENST00000547208 SLC25A31Q9H0C2 315 aa7.23□□□□□ -1.25
BEST3-208ENST00000547208 TIMM8BQ9Y5J9 83 aaPredicted RBP7.23□□□□□ -1.25
BEST3-208ENST00000547208 KLLNB2CW77 178 aa7.22□□□□□ -1.25
BEST3-208ENST00000547208 RLN2P04090 185 aa7.22□□□□□ -1.25
BEST3-208ENST00000547208 ATP5G1P05496 136 aa7.22□□□□□ -1.25
BEST3-208ENST00000547208 LEPP41159 167 aa7.22□□□□□ -1.25
BEST3-208ENST00000547208 ATP5G3P48201 142 aa7.22□□□□□ -1.25
BEST3-208ENST00000547208 CYCSP99999 105 aaKnown RBP7.22□□□□□ -1.25
BEST3-208ENST00000547208 ERCC8Q13216 396 aa7.22□□□□□ -1.25
BEST3-208ENST00000547208 Q6ZNX1 250 aa7.22□□□□□ -1.25
BEST3-208ENST00000547208 UBE2DNLQ8IWF7 75 aa7.22□□□□□ -1.25
BEST3-208ENST00000547208 EXOC3-AS1Q8N2X6 119 aa7.22□□□□□ -1.25
BEST3-208ENST00000547208 AGPAT4-IT1Q9H0P7 198 aa7.22□□□□□ -1.25
BEST3-208ENST00000547208 NOP10Q9NPE3 64 aaKnown RBP7.22□□□□□ -1.25
BEST3-208ENST00000547208 IGLV2-18A0A075B6J9 118 aa7.21□□□□□ -1.26
BEST3-208ENST00000547208 TRAV12-3A0A0B4J271 114 aa7.21□□□□□ -1.26
BEST3-208ENST00000547208 F5H768 121 aa7.21□□□□□ -1.26
BEST3-208ENST00000547208 J3KRW8 73 aa7.21□□□□□ -1.26
BEST3-208ENST00000547208 MPC2O95563 127 aa7.21□□□□□ -1.26
BEST3-208ENST00000547208 BLNKQ8WV28 456 aa7.21□□□□□ -1.26
BEST3-208ENST00000547208 FXYD5Q96DB9 178 aa7.21□□□□□ -1.26
BEST3-208ENST00000547208 ZNF503Q96F45 646 aa7.21□□□□□ -1.26
BEST3-208ENST00000547208 PRELID1Q9Y255 219 aa7.21□□□□□ -1.26
BEST3-208ENST00000547208 TIMM9Q9Y5J7 89 aa7.21□□□□□ -1.26
BEST3-208ENST00000547208 ZNF324O75467 553 aaPredicted RBP7.2□□□□□ -1.26
BEST3-208ENST00000547208 SLC25A5P05141 298 aaKnown RBP7.2□□□□□ -1.26
BEST3-208ENST00000547208 NBEAP1P0C6P0 100 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 CRISP2P16562 243 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 S100A1P23297 94 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 DEFA1P59665 94 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 DEFA3P59666 94 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 CD300CQ08708 224 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 BTN1A1Q13410 526 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 ICAM4Q14773 271 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 PRR9Q5T870 116 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 C9orf47Q6ZRZ4 202 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 C11orf72Q8NBR9 251 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 RNF141Q8WVD5 230 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 PHYHIPLQ96FC7 376 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 LINC00477Q96M19 166 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 ATP5SQ99766 215 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 PYGO2Q9BRQ0 406 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 MRPL32Q9BYC8 188 aaKnown RBP7.2□□□□□ -1.26
BEST3-208ENST00000547208 HSPB11Q9Y547 144 aa7.2□□□□□ -1.26
BEST3-208ENST00000547208 IGKV2-40A0A087WW87 121 aaPredicted RBP7.19□□□□□ -1.26
BEST3-208ENST00000547208 C7orf71A4D174 169 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 PRSS29PA6NIE9 313 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 SSNA1O43805 119 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 IGKV2D-40P01614 121 aaPredicted RBP7.19□□□□□ -1.26
BEST3-208ENST00000547208 OR10J4P0C629 311 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 HOXA5P20719 270 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 FAM3BP58499 235 aaPredicted RBP7.19□□□□□ -1.26
BEST3-208ENST00000547208 DAZ2Q13117 558 aaKnown RBP7.19□□□□□ -1.26
BEST3-208ENST00000547208 FAM122CQ6P4D5 195 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 Q6ZQT7 251 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 CCDC28AQ8IWP9 274 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 ZFAND2AQ8N6M9 145 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 ZNRF2Q8NHG8 242 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 VGLL1Q99990 258 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 LINC00467Q9BRT7 94 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 PAXXQ9BUH6 204 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 OR51M1Q9H341 326 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 KCNIP2Q9NS61 270 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 MBD2Q9UBB5 411 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 FUT9Q9Y231 359 aa7.19□□□□□ -1.26
BEST3-208ENST00000547208 C17orf112F2Z3M2 114 aa7.18□□□□□ -1.26
BEST3-208ENST00000547208 NUDT3O95989 172 aa7.18□□□□□ -1.26
BEST3-208ENST00000547208 NMBP08949 121 aa7.18□□□□□ -1.26
BEST3-208ENST00000547208 PET100P0DJ07 73 aa7.18□□□□□ -1.26
BEST3-208ENST00000547208 RPL12P30050 165 aaKnown RBP7.18□□□□□ -1.26
BEST3-208ENST00000547208 Q6ZTI0 123 aa7.18□□□□□ -1.26
BEST3-208ENST00000547208 SMIM3Q9BZL3 60 aa7.18□□□□□ -1.26
BEST3-208ENST00000547208 AAMDCQ9H7C9 122 aa7.18□□□□□ -1.26
BEST3-208ENST00000547208 WFDC1Q9HC57 220 aa7.18□□□□□ -1.26
BEST3-208ENST00000547208 ZNF492Q9P255 531 aa7.18□□□□□ -1.26
BEST3-208ENST00000547208 LINC00588Q9Y4M8 146 aa7.18□□□□□ -1.26
BEST3-208ENST00000547208 hCG_2014768A0A024R1R8 64 aa7.17□□□□□ -1.26
BEST3-208ENST00000547208 TRAV26-1A0A087WT03 109 aa7.17□□□□□ -1.26
BEST3-208ENST00000547208 GAGE12BA1L429 117 aa7.17□□□□□ -1.26
BEST3-208ENST00000547208 SNURFLB1AK76 121 aa7.17□□□□□ -1.26
BEST3-208ENST00000547208 GAGE7O76087 117 aa7.17□□□□□ -1.26
BEST3-208ENST00000547208 GAGE12FP0CL80 117 aa7.17□□□□□ -1.26
BEST3-208ENST00000547208 GAGE12GP0CL81 117 aa7.17□□□□□ -1.26
BEST3-208ENST00000547208 GAGE12IP0CL82 117 aa7.17□□□□□ -1.26
BEST3-208ENST00000547208 RNASE4P34096 147 aaKnown RBP7.17□□□□□ -1.26
BEST3-208ENST00000547208 NDUFA5Q16718 116 aa7.17□□□□□ -1.26
BEST3-208ENST00000547208 ANXA2RQ3ZCQ2 193 aa7.17□□□□□ -1.26
BEST3-208ENST00000547208 FFAR4Q5NUL3 377 aa7.17□□□□□ -1.26
BEST3-208ENST00000547208 TMPRSS5Q9H3S3 457 aa7.17□□□□□ -1.26
BEST3-208ENST00000547208 GSN-AS1Q9NRJ2 163 aa7.17□□□□□ -1.26
BEST3-208ENST00000547208 OR7C2O60412 319 aa7.16□□□□□ -1.26
BEST3-208ENST00000547208 EIF3GO75821 320 aaKnown RBP eCLIP7.16□□□□□ -1.26
BEST3-208ENST00000547208 GPX1P07203 203 aa7.16□□□□□ -1.26
BEST3-208ENST00000547208 M6PRP20645 277 aa7.16□□□□□ -1.26
BEST3-208ENST00000547208 OR5I1Q13606 314 aa7.16□□□□□ -1.26
BEST3-208ENST00000547208 TMEM78Q5T7P6 136 aa7.16□□□□□ -1.26
BEST3-208ENST00000547208 EIF4E3Q8N5X7 224 aaKnown RBP7.16□□□□□ -1.26
BEST3-208ENST00000547208 ZNF680Q8NEM1 530 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms