RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 NMBP08949 121 aa11.29□□□□□ -0.6
DDX54-204ENST00000546898 CRISP2P16562 243 aa11.29□□□□□ -0.6
DDX54-204ENST00000546898 CSN1S1P47710 185 aa11.29□□□□□ -0.6
DDX54-204ENST00000546898 RAB2AP61019 212 aa11.29□□□□□ -0.6
DDX54-204ENST00000546898 ERCC8Q13216 396 aa11.29□□□□□ -0.6
DDX54-204ENST00000546898 HSD17B11Q8NBQ5 300 aa11.29□□□□□ -0.6
DDX54-204ENST00000546898 PYGO2Q9BRQ0 406 aa11.29□□□□□ -0.6
DDX54-204ENST00000546898 AGPAT4-IT1Q9H0P7 198 aa11.29□□□□□ -0.6
DDX54-204ENST00000546898 Q9H3A6 140 aa11.29□□□□□ -0.6
DDX54-204ENST00000546898 TNFSF18Q9UNG2 199 aa11.29□□□□□ -0.6
DDX54-204ENST00000546898 IGKV2-40A0A087WW87 121 aaPredicted RBP11.28□□□□□ -0.6
DDX54-204ENST00000546898 FXYD6-FXYD2A0A087WZ82 144 aa11.28□□□□□ -0.6
DDX54-204ENST00000546898 TRBV7-9A0A0J9YWB2 115 aa11.28□□□□□ -0.6
DDX54-204ENST00000546898 C7orf71A4D174 169 aa11.28□□□□□ -0.6
DDX54-204ENST00000546898 RBAKDNA6NC62 111 aa11.28□□□□□ -0.6
DDX54-204ENST00000546898 RNF222A6NCQ9 220 aa11.28□□□□□ -0.6
DDX54-204ENST00000546898 J3KRW8 73 aa11.28□□□□□ -0.6
DDX54-204ENST00000546898 IGKV2D-40P01614 121 aaPredicted RBP11.28□□□□□ -0.6
DDX54-204ENST00000546898 HTN1P15515 57 aa11.28□□□□□ -0.6
DDX54-204ENST00000546898 RANP62826 216 aaKnown RBP11.28□□□□□ -0.6
DDX54-204ENST00000546898 SERF2P84101 59 aa11.28□□□□□ -0.6
DDX54-204ENST00000546898 CCDC28AQ8IWP9 274 aa11.28□□□□□ -0.6
DDX54-204ENST00000546898 OR10G4Q8NGN3 311 aa11.28□□□□□ -0.6
DDX54-204ENST00000546898 OR10G9Q8NGN4 311 aa11.28□□□□□ -0.6
DDX54-204ENST00000546898 OR10G7Q8NGN6 311 aa11.28□□□□□ -0.6
DDX54-204ENST00000546898 PLA2G2EQ9NZK7 142 aa11.28□□□□□ -0.6
DDX54-204ENST00000546898 TIMM8BQ9Y5J9 83 aaPredicted RBP11.28□□□□□ -0.6
DDX54-204ENST00000546898 TRAV12-3A0A0B4J271 114 aa11.27□□□□□ -0.61
DDX54-204ENST00000546898 MBP02144 154 aa11.27□□□□□ -0.61
DDX54-204ENST00000546898 ATP6V0CP27449 155 aa11.27□□□□□ -0.61
DDX54-204ENST00000546898 CDC34P49427 236 aaPredicted RBP11.27□□□□□ -0.61
DDX54-204ENST00000546898 RXFP4Q8TDU9 374 aa11.27□□□□□ -0.61
DDX54-204ENST00000546898 ZNF492Q9P255 531 aa11.27□□□□□ -0.61
DDX54-204ENST00000546898 BORCS7-ASMTA0A0B4J1R7 106 aa11.26□□□□□ -0.61
DDX54-204ENST00000546898 HTN3P15516 51 aa11.26□□□□□ -0.61
DDX54-204ENST00000546898 FAM74A1Q5RGS3 127 aa11.26□□□□□ -0.61
DDX54-204ENST00000546898 GNPNAT1Q96EK6 184 aaPredicted RBP11.26□□□□□ -0.61
DDX54-204ENST00000546898 VGLL1Q99990 258 aa11.26□□□□□ -0.61
DDX54-204ENST00000546898 LINC00467Q9BRT7 94 aa11.26□□□□□ -0.61
DDX54-204ENST00000546898 OTORQ9NRC9 128 aa11.26□□□□□ -0.61
DDX54-204ENST00000546898 G3V3Q6 166 aa11.25□□□□□ -0.61
DDX54-204ENST00000546898 GPX1P07203 203 aa11.25□□□□□ -0.61
DDX54-204ENST00000546898 STAG3L2P0CL84 134 aa11.25□□□□□ -0.61
DDX54-204ENST00000546898 STAG3L3P0CL85 134 aa11.25□□□□□ -0.61
DDX54-204ENST00000546898 P0DMU3 169 aa11.25□□□□□ -0.61
DDX54-204ENST00000546898 FAM231AP0DMU4 169 aa11.25□□□□□ -0.61
DDX54-204ENST00000546898 FAM231CP0DMU5 169 aa11.25□□□□□ -0.61
DDX54-204ENST00000546898 DEFB130BP0DP73 79 aa11.25□□□□□ -0.61
DDX54-204ENST00000546898 DEFB130AP0DP74 79 aa11.25□□□□□ -0.61
DDX54-204ENST00000546898 ZNF138P52744 262 aa11.25□□□□□ -0.61
DDX54-204ENST00000546898 ARL6IP6Q8N6S5 226 aa11.25□□□□□ -0.61
DDX54-204ENST00000546898 VPS13DQ5THJ4 4388 aa11.25□□□□□ -0.61
DDX54-204ENST00000546898 CBY3A6NI87 242 aa11.24□□□□□ -0.61
DDX54-204ENST00000546898 SNURFLB1AK76 121 aa11.24□□□□□ -0.61
DDX54-204ENST00000546898 DIRC3C9JPN6 131 aa11.24□□□□□ -0.61
DDX54-204ENST00000546898 EIF3GO75821 320 aaKnown RBP eCLIP11.24□□□□□ -0.61
DDX54-204ENST00000546898 ATP5G1P05496 136 aa11.24□□□□□ -0.61
DDX54-204ENST00000546898 ATP5G3P48201 142 aa11.24□□□□□ -0.61
DDX54-204ENST00000546898 BTN1A1Q13410 526 aa11.24□□□□□ -0.61
DDX54-204ENST00000546898 RPL7L1Q6DKI1 246 aaKnown RBP11.24□□□□□ -0.61
DDX54-204ENST00000546898 ZFAND2AQ8N6M9 145 aa11.24□□□□□ -0.61
DDX54-204ENST00000546898 ZNF680Q8NEM1 530 aa11.24□□□□□ -0.61
DDX54-204ENST00000546898 CMTM2Q8TAZ6 248 aa11.24□□□□□ -0.61
DDX54-204ENST00000546898 TMED6Q8WW62 240 aa11.24□□□□□ -0.61
DDX54-204ENST00000546898 NOP10Q9NPE3 64 aaKnown RBP11.24□□□□□ -0.61
DDX54-204ENST00000546898 LENEPQ9Y5L5 61 aa11.24□□□□□ -0.61
DDX54-204ENST00000546898 DNAH6Q9C0G6 4158 aa11.24□□□□□ -0.61
DDX54-204ENST00000546898 TAAR5O14804 337 aa11.23□□□□□ -0.61
DDX54-204ENST00000546898 ZNF324O75467 553 aaPredicted RBP11.23□□□□□ -0.61
DDX54-204ENST00000546898 ARL14EPLP0DKL9 152 aa11.23□□□□□ -0.61
DDX54-204ENST00000546898 RNASE4P34096 147 aaKnown RBP11.23□□□□□ -0.61
DDX54-204ENST00000546898 CD300CQ08708 224 aa11.23□□□□□ -0.61
DDX54-204ENST00000546898 ANXA2RQ3ZCQ2 193 aa11.23□□□□□ -0.61
DDX54-204ENST00000546898 EIF4E3Q8N5X7 224 aaKnown RBP11.23□□□□□ -0.61
DDX54-204ENST00000546898 LINC00612Q8N6U2 182 aa11.23□□□□□ -0.61
DDX54-204ENST00000546898 C15orf53Q8NAA6 179 aa11.23□□□□□ -0.61
DDX54-204ENST00000546898 SH3BGRL3Q9H299 93 aa11.23□□□□□ -0.61
DDX54-204ENST00000546898 PGPA6NDG6 321 aa11.22□□□□□ -0.61
DDX54-204ENST00000546898 HMGB3O15347 200 aaKnown RBP11.22□□□□□ -0.61
DDX54-204ENST00000546898 PRR9Q5T870 116 aa11.22□□□□□ -0.61
DDX54-204ENST00000546898 TMEM88Q6PEY1 159 aa11.22□□□□□ -0.61
DDX54-204ENST00000546898 Q8TAT8 98 aa11.22□□□□□ -0.61
DDX54-204ENST00000546898 RAB24Q969Q5 203 aa11.22□□□□□ -0.61
DDX54-204ENST00000546898 ACTR3CQ9C0K3 210 aaPredicted RBP11.22□□□□□ -0.61
DDX54-204ENST00000546898 ARPC5O15511 151 aa11.21□□□□□ -0.61
DDX54-204ENST00000546898 DAZ2Q13117 558 aaKnown RBP11.21□□□□□ -0.61
DDX54-204ENST00000546898 SUN5Q8TC36 379 aa11.21□□□□□ -0.61
DDX54-204ENST00000546898 HYLS1Q96M11 299 aa11.21□□□□□ -0.61
DDX54-204ENST00000546898 F5H768 121 aa11.2□□□□□ -0.62
DDX54-204ENST00000546898 RGS13O14921 159 aa11.2□□□□□ -0.62
DDX54-204ENST00000546898 CXorf1O96002 111 aa11.2□□□□□ -0.62
DDX54-204ENST00000546898 GCHFRP30047 84 aa11.2□□□□□ -0.62
DDX54-204ENST00000546898 IBA57Q5T440 356 aaKnown RBP11.2□□□□□ -0.62
DDX54-204ENST00000546898 POM121L12Q8N7R1 296 aa11.2□□□□□ -0.62
DDX54-204ENST00000546898 C11orf72Q8NBR9 251 aa11.2□□□□□ -0.62
DDX54-204ENST00000546898 ST6GAL2Q96JF0 529 aa11.2□□□□□ -0.62
DDX54-204ENST00000546898 TMEM167BQ9NRX6 74 aa11.2□□□□□ -0.62
DDX54-204ENST00000546898 IGHV1OR15-1A0A075B7D0 117 aa11.19□□□□□ -0.62
DDX54-204ENST00000546898 SERTM2A0A1B0GWG4 89 aa11.19□□□□□ -0.62
DDX54-204ENST00000546898 ZNF345Q14585 488 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms