RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 LINC00052Q96N35 136 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 TUBA4BQ9H853 241 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 COX11Q9Y6N1 276 aa4.67□□□□□ -1.66
PRKDC-211ENST00000546304 DNAH7Q8WXX0 4024 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 KNCNA6PVL3 124 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 F6UB75 175 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 M0R3E3 92 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 CXorf1O96002 111 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 NBEAP1P0C6P0 100 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 HLA-DRB4P13762 266 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 SULT1A2P50226 295 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 RAB5CP51148 216 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 FGF8P55075 233 aaPredicted RBP4.66□□□□□ -1.66
PRKDC-211ENST00000546304 PSG9Q00887 426 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 ACTL10Q5JWF8 245 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 FAM74A1Q5RGS3 127 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 GDF5OSQ5U4N7 250 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 ALKAL2Q6UX46 152 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 TRPT1Q86TN4 253 aaKnown RBP4.66□□□□□ -1.66
PRKDC-211ENST00000546304 STHQ8IWL8 128 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 RPUSD4Q96CM3 377 aaKnown RBP4.66□□□□□ -1.66
PRKDC-211ENST00000546304 MRPL53Q96EL3 112 aaKnown RBP4.66□□□□□ -1.66
PRKDC-211ENST00000546304 SAV1Q9H4B6 383 aaPredicted RBP4.66□□□□□ -1.66
PRKDC-211ENST00000546304 AAMDCQ9H7C9 122 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 TMEM167BQ9NRX6 74 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 CLEC5AQ9NY25 188 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 HLA-DRB4X5D2U9 266 aa4.66□□□□□ -1.66
PRKDC-211ENST00000546304 TRGV11A0A075B6L2 103 aa4.65□□□□□ -1.67
PRKDC-211ENST00000546304 LOC102724200A0A096LPH7 203 aaPredicted RBP4.65□□□□□ -1.67
PRKDC-211ENST00000546304 A0A0J9YX75 114 aa4.65□□□□□ -1.67
PRKDC-211ENST00000546304 A0A1B0GV50 99 aa4.65□□□□□ -1.67
PRKDC-211ENST00000546304 RBMY1BA6NDE4 496 aaKnown RBP4.65□□□□□ -1.67
PRKDC-211ENST00000546304 RBMY1EA6NEQ0 496 aaKnown RBP4.65□□□□□ -1.67
PRKDC-211ENST00000546304 RBMY1DP0C7P1 496 aaKnown RBP4.65□□□□□ -1.67
PRKDC-211ENST00000546304 RPL35AP18077 110 aaKnown RBP4.65□□□□□ -1.67
PRKDC-211ENST00000546304 APOC4P55056 127 aa4.65□□□□□ -1.67
PRKDC-211ENST00000546304 HIST1H1AQ02539 215 aaPredicted RBP4.65□□□□□ -1.67
PRKDC-211ENST00000546304 PSG3Q16557 428 aa4.65□□□□□ -1.67
PRKDC-211ENST00000546304 DEFB121Q5J5C9 76 aa4.65□□□□□ -1.67
PRKDC-211ENST00000546304 EBLN2Q6P2I7 272 aa4.65□□□□□ -1.67
PRKDC-211ENST00000546304 LYPD1Q8N2G4 141 aa4.65□□□□□ -1.67
PRKDC-211ENST00000546304 EXOC3-AS1Q8N2X6 119 aa4.65□□□□□ -1.67
PRKDC-211ENST00000546304 NTN5Q8WTR8 489 aaPredicted RBP4.65□□□□□ -1.67
PRKDC-211ENST00000546304 B9D2Q9BPU9 175 aa4.65□□□□□ -1.67
PRKDC-211ENST00000546304 Q9H3A6 140 aa4.65□□□□□ -1.67
PRKDC-211ENST00000546304 OTORQ9NRC9 128 aa4.65□□□□□ -1.67
PRKDC-211ENST00000546304 PRELID1Q9Y255 219 aa4.65□□□□□ -1.67
PRKDC-211ENST00000546304 IGKV2-40A0A087WW87 121 aaPredicted RBP4.64□□□□□ -1.67
PRKDC-211ENST00000546304 KIR2DL5BA0A0G2JN68 375 aa4.64□□□□□ -1.67
PRKDC-211ENST00000546304 KIR2DL5BA0A0G2JPC4 375 aa4.64□□□□□ -1.67
PRKDC-211ENST00000546304 ZNF705FA8MVS1 300 aaPredicted RBP4.64□□□□□ -1.67
PRKDC-211ENST00000546304 ZNF705EA8MWA4 302 aaPredicted RBP4.64□□□□□ -1.67
PRKDC-211ENST00000546304 GGTLC3B5MD39 225 aa4.64□□□□□ -1.67
PRKDC-211ENST00000546304 PRAC2D3DTV9 90 aa4.64□□□□□ -1.67
PRKDC-211ENST00000546304 H3BMM0 161 aa4.64□□□□□ -1.67
PRKDC-211ENST00000546304 CA1P00915 261 aaPredicted RBP4.64□□□□□ -1.67
PRKDC-211ENST00000546304 IGKV2D-40P01614 121 aaPredicted RBP4.64□□□□□ -1.67
PRKDC-211ENST00000546304 PRB4P10163 310 aaPredicted RBP4.64□□□□□ -1.67
PRKDC-211ENST00000546304 CNN1P51911 297 aaKnown RBP4.64□□□□□ -1.67
PRKDC-211ENST00000546304 RANP62826 216 aaKnown RBP4.64□□□□□ -1.67
PRKDC-211ENST00000546304 PET117Q6UWS5 81 aa4.64□□□□□ -1.67
PRKDC-211ENST00000546304 LINC00322Q6ZN03 302 aaPredicted RBP4.64□□□□□ -1.67
PRKDC-211ENST00000546304 KIR2DL5AQ8N109 375 aa4.64□□□□□ -1.67
PRKDC-211ENST00000546304 OR8A1Q8NGG7 326 aa4.64□□□□□ -1.67
PRKDC-211ENST00000546304 KIR2DL5BQ8NHK3 375 aa4.64□□□□□ -1.67
PRKDC-211ENST00000546304 SUN5Q8TC36 379 aa4.64□□□□□ -1.67
PRKDC-211ENST00000546304 SFT2D1Q8WV19 159 aa4.64□□□□□ -1.67
PRKDC-211ENST00000546304 MBD3L1Q8WWY6 194 aa4.64□□□□□ -1.67
PRKDC-211ENST00000546304 ARL2-SNX15V9GYD0 113 aa4.64□□□□□ -1.67
PRKDC-211ENST00000546304 TRAV1-1A0A0B4J248 108 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 A0A1W2PRE2 83 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 FAM74A7A6NL05 159 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 A8MTW9 85 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 TEX46H3BTG2 121 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 DUSP14O95147 198 aaKnown RBP4.63□□□□□ -1.67
PRKDC-211ENST00000546304 TNFRSF6BO95407 300 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 IGKV3-20P01619 116 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 HBE1P02100 147 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 ZNF705DP0CH99 300 aaPredicted RBP4.63□□□□□ -1.67
PRKDC-211ENST00000546304 ZNF705BP0CI00 300 aaPredicted RBP4.63□□□□□ -1.67
PRKDC-211ENST00000546304 MALP21145 153 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 CSN1S1P47710 185 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 UBE2G2P60604 165 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 GNG5P63218 68 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 HAGHQ16775 308 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 DEFB135Q30KP9 77 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 MORN3Q6PF18 240 aaPredicted RBP4.63□□□□□ -1.67
PRKDC-211ENST00000546304 SBSPONQ8IVN8 264 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 C5orf17Q8NAS9 161 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 OR4B1Q8NGF8 309 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 OR10J6PQ8NGY7 276 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 CMTM2Q8TAZ6 248 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 ASCL2Q99929 193 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 RPH3ALQ9UNE2 315 aa4.63□□□□□ -1.67
PRKDC-211ENST00000546304 YTHDF2Q9Y5A9 579 aaKnown RBP4.63□□□□□ -1.67
PRKDC-211ENST00000546304 M0R2Z0 102 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 UBE2CO00762 179 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 SLC25A5P05141 298 aaKnown RBP4.62□□□□□ -1.67
PRKDC-211ENST00000546304 PPT1P50897 306 aa4.62□□□□□ -1.67
PRKDC-211ENST00000546304 NUTF2P61970 127 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms