RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 VGLL1Q99990 258 aa11.28□□□□□ -0.6
CPSF7-225ENST00000545934 AGPAT4-IT1Q9H0P7 198 aa11.28□□□□□ -0.6
CPSF7-225ENST00000545934 MDFICQ9P1T7 246 aa11.28□□□□□ -0.6
CPSF7-225ENST00000545934 FLVCR2Q9UPI3 526 aa11.28□□□□□ -0.6
CPSF7-225ENST00000545934 TRBV19A0A075B6N1 114 aa11.27□□□□□ -0.61
CPSF7-225ENST00000545934 MBPP02686 304 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-225ENST00000545934 NMBP08949 121 aa11.27□□□□□ -0.61
CPSF7-225ENST00000545934 GCSHP23434 173 aa11.27□□□□□ -0.61
CPSF7-225ENST00000545934 SLAQ13239 276 aa11.27□□□□□ -0.61
CPSF7-225ENST00000545934 MRPL23Q16540 153 aaKnown RBP11.27□□□□□ -0.61
CPSF7-225ENST00000545934 MIC13Q5XKP0 118 aa11.27□□□□□ -0.61
CPSF7-225ENST00000545934 NRARPQ7Z6K4 114 aa11.27□□□□□ -0.61
CPSF7-225ENST00000545934 TP53TG3Q9ULZ0 132 aa11.27□□□□□ -0.61
CPSF7-225ENST00000545934 HHLA3Q9XRX5 114 aa11.27□□□□□ -0.61
CPSF7-225ENST00000545934 LY96Q9Y6Y9 160 aa11.27□□□□□ -0.61
CPSF7-225ENST00000545934 TRAV9-2A0A087WT02 112 aa11.26□□□□□ -0.61
CPSF7-225ENST00000545934 MPDU1O75352 247 aa11.26□□□□□ -0.61
CPSF7-225ENST00000545934 IGHV3-53P01767 116 aa11.26□□□□□ -0.61
CPSF7-225ENST00000545934 PRR9Q5T870 116 aa11.26□□□□□ -0.61
CPSF7-225ENST00000545934 Q6ZRG5 221 aa11.26□□□□□ -0.61
CPSF7-225ENST00000545934 C9orf47Q6ZRZ4 202 aa11.26□□□□□ -0.61
CPSF7-225ENST00000545934 ZFAND2AQ8N6M9 145 aa11.26□□□□□ -0.61
CPSF7-225ENST00000545934 OR1L4Q8NGR5 311 aa11.26□□□□□ -0.61
CPSF7-225ENST00000545934 PFDN5Q99471 154 aa11.26□□□□□ -0.61
CPSF7-225ENST00000545934 MRPL16Q9NX20 251 aaKnown RBP11.26□□□□□ -0.61
CPSF7-225ENST00000545934 MSRB1Q9NZV6 116 aa11.26□□□□□ -0.61
CPSF7-225ENST00000545934 TMEM14CQ9P0S9 112 aa11.26□□□□□ -0.61
CPSF7-225ENST00000545934 PRELID1Q9Y255 219 aa11.26□□□□□ -0.61
CPSF7-225ENST00000545934 WDR83OSQ9Y284 106 aa11.26□□□□□ -0.61
CPSF7-225ENST00000545934 NAP1L6A6NFF2 107 aa11.25□□□□□ -0.61
CPSF7-225ENST00000545934 PRAF2O60831 178 aa11.25□□□□□ -0.61
CPSF7-225ENST00000545934 RNASE4P34096 147 aaKnown RBP11.25□□□□□ -0.61
CPSF7-225ENST00000545934 VWC2Q2TAL6 325 aa11.25□□□□□ -0.61
CPSF7-225ENST00000545934 Q6ZQT7 251 aa11.25□□□□□ -0.61
CPSF7-225ENST00000545934 NEGR1Q7Z3B1 354 aa11.25□□□□□ -0.61
CPSF7-225ENST00000545934 WFDC10BQ8IUB3 73 aa11.25□□□□□ -0.61
CPSF7-225ENST00000545934 MITD1Q8WV92 249 aa11.25□□□□□ -0.61
CPSF7-225ENST00000545934 C8orf49Q96NF6 230 aa11.25□□□□□ -0.61
CPSF7-225ENST00000545934 SRRQ9GZT4 340 aa11.25□□□□□ -0.61
CPSF7-225ENST00000545934 C11orf1Q9H5F2 150 aa11.25□□□□□ -0.61
CPSF7-225ENST00000545934 NOL3O60936 208 aaKnown RBP11.24□□□□□ -0.61
CPSF7-225ENST00000545934 RAB31Q13636 194 aa11.24□□□□□ -0.61
CPSF7-225ENST00000545934 PDE6HQ13956 83 aa11.24□□□□□ -0.61
CPSF7-225ENST00000545934 IQCF2Q8IXL9 164 aa11.24□□□□□ -0.61
CPSF7-225ENST00000545934 MRPL32Q9BYC8 188 aaKnown RBP11.24□□□□□ -0.61
CPSF7-225ENST00000545934 GSKIPQ9P0R6 139 aa11.24□□□□□ -0.61
CPSF7-225ENST00000545934 IGHV1OR15-1A0A075B7D0 117 aa11.23□□□□□ -0.61
CPSF7-225ENST00000545934 FAM229AH3BQW9 127 aa11.23□□□□□ -0.61
CPSF7-225ENST00000545934 GPX1P07203 203 aa11.23□□□□□ -0.61
CPSF7-225ENST00000545934 HIST1H1EP10412 219 aaKnown RBP11.23□□□□□ -0.61
CPSF7-225ENST00000545934 BTCP35070 178 aa11.23□□□□□ -0.61
CPSF7-225ENST00000545934 RPL29P47914 159 aaKnown RBP11.23□□□□□ -0.61
CPSF7-225ENST00000545934 CHAC2Q8WUX2 184 aa11.23□□□□□ -0.61
CPSF7-225ENST00000545934 TMEM70Q9BUB7 260 aa11.23□□□□□ -0.61
CPSF7-225ENST00000545934 SLC39A9Q9NUM3 307 aa11.23□□□□□ -0.61
CPSF7-225ENST00000545934 LRCOL1A6NCL2 159 aa11.22□□□□□ -0.61
CPSF7-225ENST00000545934 K7EQD1 137 aa11.22□□□□□ -0.61
CPSF7-225ENST00000545934 RGS13O14921 159 aa11.22□□□□□ -0.61
CPSF7-225ENST00000545934 S100A5P33763 92 aa11.22□□□□□ -0.61
CPSF7-225ENST00000545934 HAMPP81172 84 aa11.22□□□□□ -0.61
CPSF7-225ENST00000545934 BAK1Q16611 211 aa11.22□□□□□ -0.61
CPSF7-225ENST00000545934 Q6ZSN1 163 aa11.22□□□□□ -0.61
CPSF7-225ENST00000545934 EXOC3-AS1Q8N2X6 119 aa11.22□□□□□ -0.61
CPSF7-225ENST00000545934 C12orf45Q8N5I9 185 aaPredicted RBP11.22□□□□□ -0.61
CPSF7-225ENST00000545934 PYYP10082 97 aa11.21□□□□□ -0.61
CPSF7-225ENST00000545934 EVI2AP22794 236 aa11.21□□□□□ -0.61
CPSF7-225ENST00000545934 UQCC1Q9NVA1 299 aa11.21□□□□□ -0.61
CPSF7-225ENST00000545934 ZNF492Q9P255 531 aa11.21□□□□□ -0.61
CPSF7-225ENST00000545934 IGKV2-40A0A087WW87 121 aaPredicted RBP11.2□□□□□ -0.62
CPSF7-225ENST00000545934 TRBV7-9A0A0J9YWB2 115 aa11.2□□□□□ -0.62
CPSF7-225ENST00000545934 L7N2F9 121 aa11.2□□□□□ -0.62
CPSF7-225ENST00000545934 CST7O76096 145 aa11.2□□□□□ -0.62
CPSF7-225ENST00000545934 IGKV2D-40P01614 121 aaPredicted RBP11.2□□□□□ -0.62
CPSF7-225ENST00000545934 SRIP30626 198 aa11.2□□□□□ -0.62
CPSF7-225ENST00000545934 VAMP2P63027 116 aa11.2□□□□□ -0.62
CPSF7-225ENST00000545934 ZNF415Q09FC8 603 aa11.2□□□□□ -0.62
CPSF7-225ENST00000545934 OR10G4Q8NGN3 311 aa11.2□□□□□ -0.62
CPSF7-225ENST00000545934 ARPC5LQ9BPX5 153 aa11.2□□□□□ -0.62
CPSF7-225ENST00000545934 TIMM9Q9Y5J7 89 aa11.2□□□□□ -0.62
CPSF7-225ENST00000545934 FAM24AA6NFZ4 105 aa11.19□□□□□ -0.62
CPSF7-225ENST00000545934 E5RGE8 158 aa11.19□□□□□ -0.62
CPSF7-225ENST00000545934 TMEM78Q5T7P6 136 aa11.19□□□□□ -0.62
CPSF7-225ENST00000545934 NTN5Q8WTR8 489 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-225ENST00000545934 ZNF479Q96JC4 524 aa11.19□□□□□ -0.62
CPSF7-225ENST00000545934 SDHCQ99643 169 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-225ENST00000545934 C20orf85Q9H1P6 137 aa11.19□□□□□ -0.62
CPSF7-225ENST00000545934 HMCN2Q8NDA2 5059 aa11.19□□□□□ -0.62
CPSF7-225ENST00000545934 IGLV5-52A0A0A0MRZ9 124 aa11.18□□□□□ -0.62
CPSF7-225ENST00000545934 TRGV4A0A0C4DH28 118 aa11.18□□□□□ -0.62
CPSF7-225ENST00000545934 CCSO14618 274 aa11.18□□□□□ -0.62
CPSF7-225ENST00000545934 BCAP31P51572 246 aa11.18□□□□□ -0.62
CPSF7-225ENST00000545934 C10orf126Q8N4M7 172 aa11.18□□□□□ -0.62
CPSF7-225ENST00000545934 BLNKQ8WV28 456 aa11.18□□□□□ -0.62
CPSF7-225ENST00000545934 RASL10AQ92737 203 aa11.18□□□□□ -0.62
CPSF7-225ENST00000545934 FAM167A-AS1Q96KT0 104 aa11.18□□□□□ -0.62
CPSF7-225ENST00000545934 SLC25A2Q9BXI2 301 aa11.18□□□□□ -0.62
CPSF7-225ENST00000545934 AAMDCQ9H7C9 122 aa11.18□□□□□ -0.62
CPSF7-225ENST00000545934 LSM5Q9Y4Y9 91 aaKnown RBP11.18□□□□□ -0.62
CPSF7-225ENST00000545934 UBE2L5PA0A1B0GUS4 154 aa11.17□□□□□ -0.62
CPSF7-225ENST00000545934 ORM1P02763 201 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms