RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PRM2P04554 102 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 ATP5G1P05496 136 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 CDK1P06493 297 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 DEFA4P12838 97 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 ATP5G3P48201 142 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 GBX2P52951 348 aaPredicted RBP1.53□□□□□ -2.16
SNHG1-224ENST00000545688 PPP3R1P63098 170 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 RRN3P1Q2M238 152 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 CCDC58Q4VC31 144 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 THOC7Q6I9Y2 204 aaKnown RBP1.53□□□□□ -2.16
SNHG1-224ENST00000545688 OR10K2Q6IF99 312 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 RPL22L1Q6P5R6 122 aaKnown RBP1.53□□□□□ -2.16
SNHG1-224ENST00000545688 SLC35G3Q8N808 338 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 VSTM2AQ8TAG5 236 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 CANT1Q8WVQ1 401 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 CMTM5Q96DZ9 223 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 PGLYRP3Q96LB9 341 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 LINC01600Q96MT4 127 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 S100A13Q99584 98 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 UQCC2Q9BRT2 126 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 PRRG3Q9BZD7 231 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 GABARAPL1Q9H0R8 117 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 LPAR5Q9H1C0 372 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 DCSTAMPQ9H295 470 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 AK3Q9UIJ7 227 aa1.53□□□□□ -2.16
SNHG1-224ENST00000545688 RBMX2Q9Y388 322 aaKnown RBP1.53□□□□□ -2.16
SNHG1-224ENST00000545688 TRAV26-1A0A087WT03 109 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 IGHV3-21A0A0B4J1V1 117 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 TEX50A0A1B0GTY4 177 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 TCRBV3S1A0A5B6 114 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 DAPL1A0PJW8 107 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 F5H768 121 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 CRTAPO75718 401 aaPredicted RBP1.52□□□□□ -2.17
SNHG1-224ENST00000545688 TMEM50AO95807 157 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 FAM107AO95990 144 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 HRASP01112 189 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 CD2P06729 351 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 UBBP0CG47 229 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 LIMS3P0CW19 117 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 LIMS4P0CW20 117 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 OR13C7P0DN81 318 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 M6PRP20645 277 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 NPPCP23582 126 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 TAS2R43P59537 309 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 DEFB1P60022 68 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 FGL1Q08830 312 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 WFDC2Q14508 124 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 MSMO1Q15800 293 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 Q499Y3 187 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 ACSM3Q53FZ2 586 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 PSMG4Q5JS54 123 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 SLC25A24Q6NUK1 477 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 FOXI2Q6ZQN5 318 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 DHFR2Q86XF0 187 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 DEFB107AQ8IZN7 70 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 Q8N814 137 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 DYDC1Q8WWB3 177 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 SMIM19Q96E16 107 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 GNPNAT1Q96EK6 184 aaPredicted RBP1.52□□□□□ -2.17
SNHG1-224ENST00000545688 IGF2BP2-AS1Q96M15 143 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 DERL3Q96Q80 235 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 HSD17B10Q99714 261 aaKnown RBP1.52□□□□□ -2.17
SNHG1-224ENST00000545688 SLC29A1Q99808 456 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 GINS3Q9BRX5 216 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 PECRQ9BY49 303 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 SLC35B3Q9H1N7 401 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 C12orf4Q9NQ89 552 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 FGFR1OP2Q9NVK5 253 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 PLEKHJ1Q9NW61 149 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 MRPL36Q9P0J6 103 aaKnown RBP1.52□□□□□ -2.17
SNHG1-224ENST00000545688 RABAC1Q9UI14 185 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 GOLT1BQ9Y3E0 138 aa1.52□□□□□ -2.17
SNHG1-224ENST00000545688 A0A0J9YX75 114 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 MFNGO00587 321 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 DENRO43583 198 aaKnown RBP1.51□□□□□ -2.17
SNHG1-224ENST00000545688 FKBP6O75344 327 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 SLC22A5O76082 557 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 MT-CO2P00403 227 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 TRAPPC2P0DI81 140 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 TRAPPC2BP0DI82 140 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 DEFB130BP0DP73 79 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 DEFB130AP0DP74 79 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 NQO2P16083 231 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 ETV6P41212 452 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 AP2S1P53680 142 aaPredicted RBP1.51□□□□□ -2.17
SNHG1-224ENST00000545688 FXYD7P58549 80 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 B2MP61769 119 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 MRPS15P82914 257 aaKnown RBP1.51□□□□□ -2.17
SNHG1-224ENST00000545688 PSG9Q00887 426 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 DHRS2Q13268 280 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 RCN1Q15293 331 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 Q56UQ5 140 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 FAM78BQ5VT40 261 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 SPATA31B1PQ5VZV4 182 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 LYPD5Q6UWN5 251 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 JAGN1Q8N5M9 183 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 OR1L8Q8NGR8 309 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 OR10J5Q8NHC4 309 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 ARHGAP5-AS1Q96IT6 56 aa1.51□□□□□ -2.17
SNHG1-224ENST00000545688 MYCBPQ99417 103 aaPredicted RBP1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 259.5 ms